RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 PTH1RQ03431 593 aa24.91■■□□□ 1.58
TMED4-204ENST00000477639 GCKRQ14397 625 aa24.91■■□□□ 1.58
TMED4-204ENST00000477639 COPS6Q7L5N1 327 aa24.91■■□□□ 1.58
TMED4-204ENST00000477639 PPP1R9BQ96SB3 815 aa24.91■■□□□ 1.58
TMED4-204ENST00000477639 AK2P54819 239 aa24.91■■□□□ 1.58
TMED4-204ENST00000477639 NEXNQ0ZGT2 675 aa24.91■■□□□ 1.58
TMED4-204ENST00000477639 NSFL1CQ9UNZ2 370 aaKnown RBP24.91■■□□□ 1.58
TMED4-204ENST00000477639 CLCN1P35523 988 aa24.9■■□□□ 1.58
TMED4-204ENST00000477639 RUFY3Q7L099 469 aa24.9■■□□□ 1.58
TMED4-204ENST00000477639 DCAF5Q96JK2 942 aa24.89■■□□□ 1.58
TMED4-204ENST00000477639 LIMCH1Q9UPQ0 1083 aa24.89■■□□□ 1.58
TMED4-204ENST00000477639 CYP27B1O15528 508 aa24.89■■□□□ 1.57
TMED4-204ENST00000477639 CSB-PGBD3P0DP91 1061 aa24.89■■□□□ 1.57
TMED4-204ENST00000477639 CCDC173Q0VFZ6 552 aa24.89■■□□□ 1.57
TMED4-204ENST00000477639 MYD88Q99836 296 aa24.89■■□□□ 1.57
TMED4-204ENST00000477639 TMEM63CQ9P1W3 806 aa24.89■■□□□ 1.57
TMED4-204ENST00000477639 USP16Q9Y5T5 823 aa24.89■■□□□ 1.57
TMED4-204ENST00000477639 WDR33Q9C0J8 1336 aaKnown RBP24.89■■□□□ 1.57
TMED4-204ENST00000477639 MBD3O95983 291 aa24.88■■□□□ 1.57
TMED4-204ENST00000477639 SNRPA1P09661 255 aaKnown RBP24.88■■□□□ 1.57
TMED4-204ENST00000477639 EPHA10Q5JZY3 1008 aa24.88■■□□□ 1.57
TMED4-204ENST00000477639 CCDC8Q9H0W5 538 aaPredicted RBP24.88■■□□□ 1.57
TMED4-204ENST00000477639 RPAP1Q9BWH6 1393 aaPredicted RBP24.87■■□□□ 1.57
TMED4-204ENST00000477639 TM6SF1Q9BZW5 370 aa24.87■■□□□ 1.57
TMED4-204ENST00000477639 USP21Q9UK80 565 aa24.87■■□□□ 1.57
TMED4-204ENST00000477639 CHRNA2Q15822 529 aa24.86■■□□□ 1.57
TMED4-204ENST00000477639 ANKRD13DQ6ZTN6 518 aa24.86■■□□□ 1.57
TMED4-204ENST00000477639 RBSNQ9H1K0 784 aa24.86■■□□□ 1.57
TMED4-204ENST00000477639 SNRKQ9NRH2 765 aa24.86■■□□□ 1.57
TMED4-204ENST00000477639 TLR7Q9NYK1 1049 aaKnown RBP24.86■■□□□ 1.57
TMED4-204ENST00000477639 PKD1L3Q7Z443 1732 aa24.86■■□□□ 1.57
TMED4-204ENST00000477639 ESPNB1AK53 854 aa24.85■■□□□ 1.57
TMED4-204ENST00000477639 HIP1O00291 1037 aa24.85■■□□□ 1.57
TMED4-204ENST00000477639 CASTP20810 708 aaKnown RBP24.85■■□□□ 1.57
TMED4-204ENST00000477639 PRIM1P49642 420 aaKnown RBP24.85■■□□□ 1.57
TMED4-204ENST00000477639 NECTIN1Q15223 517 aa24.85■■□□□ 1.57
TMED4-204ENST00000477639 ERBB4Q15303 1308 aa24.85■■□□□ 1.57
TMED4-204ENST00000477639 CCDC171Q6TFL3 1326 aa24.85■■□□□ 1.57
TMED4-204ENST00000477639 PRPF40BQ6NWY9 871 aaKnown RBP24.85■■□□□ 1.57
TMED4-204ENST00000477639 TTC5Q8N0Z6 440 aa24.85■■□□□ 1.57
TMED4-204ENST00000477639 FMNL2Q96PY5 1086 aa24.85■■□□□ 1.57
TMED4-204ENST00000477639 SIL1Q9H173 461 aa24.85■■□□□ 1.57
TMED4-204ENST00000477639 ANO8Q9HCE9 1232 aaPredicted RBP24.85■■□□□ 1.57
TMED4-204ENST00000477639 ZSWIM6Q9HCJ5 1215 aa24.85■■□□□ 1.57
TMED4-204ENST00000477639 CPA1P15085 419 aa24.84■■□□□ 1.57
TMED4-204ENST00000477639 KLHDC4Q8TBB5 520 aa24.84■■□□□ 1.57
TMED4-204ENST00000477639 TRIM44Q96DX7 344 aaPredicted RBP24.84■■□□□ 1.57
TMED4-204ENST00000477639 NMIQ13287 307 aaPredicted RBP24.84■■□□□ 1.57
TMED4-204ENST00000477639 ADCK5Q3MIX3 580 aa24.84■■□□□ 1.57
TMED4-204ENST00000477639 VPS53Q5VIR6 699 aa24.84■■□□□ 1.57
TMED4-204ENST00000477639 LRSAM1Q6UWE0 723 aa24.84■■□□□ 1.57
TMED4-204ENST00000477639 CPDO75976 1380 aa24.83■■□□□ 1.57
TMED4-204ENST00000477639 FNBP4Q8N3X1 1017 aaPredicted RBP24.83■■□□□ 1.57
TMED4-204ENST00000477639 FAM227BQ96M60 508 aa24.83■■□□□ 1.57
TMED4-204ENST00000477639 QTRT2Q9H974 415 aaKnown RBP24.83■■□□□ 1.57
TMED4-204ENST00000477639 COL15A1P39059 1388 aa24.82■■□□□ 1.56
TMED4-204ENST00000477639 RFX5P48382 616 aaPredicted RBP24.82■■□□□ 1.56
TMED4-204ENST00000477639 MAP4K1Q92918 833 aa24.82■■□□□ 1.56
TMED4-204ENST00000477639 JAKMIP1Q96N16 626 aaKnown RBP24.82■■□□□ 1.56
TMED4-204ENST00000477639 LARP6Q9BRS8 491 aaKnown RBP24.82■■□□□ 1.56
TMED4-204ENST00000477639 COPRSQ9NQ92 184 aa24.82■■□□□ 1.56
TMED4-204ENST00000477639 PDRG1Q9NUG6 133 aa24.82■■□□□ 1.56
TMED4-204ENST00000477639 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.82■■□□□ 1.56
TMED4-204ENST00000477639 PIP4K2AP48426 406 aaPredicted RBP24.81■■□□□ 1.56
TMED4-204ENST00000477639 ANP32BQ92688 251 aaKnown RBP24.81■■□□□ 1.56
TMED4-204ENST00000477639 BOLA2Q9H3K6 86 aa24.81■■□□□ 1.56
TMED4-204ENST00000477639 RBM8AQ9Y5S9 174 aaKnown RBP24.81■■□□□ 1.56
TMED4-204ENST00000477639 LARGE1O95461 756 aa24.8■■□□□ 1.56
TMED4-204ENST00000477639 CYP46A1Q9Y6A2 500 aa24.8■■□□□ 1.56
TMED4-204ENST00000477639 GLI3P10071 1580 aa24.8■■□□□ 1.56
TMED4-204ENST00000477639 ZSCAN22P10073 491 aaPredicted RBP24.8■■□□□ 1.56
TMED4-204ENST00000477639 CABP4P57796 275 aa24.8■■□□□ 1.56
TMED4-204ENST00000477639 RABL6Q3YEC7 729 aaPredicted RBP24.8■■□□□ 1.56
TMED4-204ENST00000477639 CREB3L3Q68CJ9 461 aa24.8■■□□□ 1.56
TMED4-204ENST00000477639 ZSCAN31Q96LW9 406 aaPredicted RBP24.8■■□□□ 1.56
TMED4-204ENST00000477639 SYCE3A1L190 88 aa24.79■■□□□ 1.56
TMED4-204ENST00000477639 USP48Q86UV5 1035 aa24.79■■□□□ 1.56
TMED4-204ENST00000477639 TMEM87AQ8NBN3 555 aa24.79■■□□□ 1.56
TMED4-204ENST00000477639 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.79■■□□□ 1.56
TMED4-204ENST00000477639 RXRBP28702 533 aa24.78■■□□□ 1.56
TMED4-204ENST00000477639 PTPN12Q05209 780 aaKnown RBP24.78■■□□□ 1.56
TMED4-204ENST00000477639 JARID2Q92833 1246 aaPredicted RBP24.78■■□□□ 1.56
TMED4-204ENST00000477639 SMC3Q9UQE7 1217 aa24.78■■□□□ 1.56
TMED4-204ENST00000477639 BCL9LQ86UU0 1499 aa24.78■■□□□ 1.56
TMED4-204ENST00000477639 GADD45BO75293 160 aaPredicted RBP24.78■■□□□ 1.56
TMED4-204ENST00000477639 SYT1P21579 422 aa24.78■■□□□ 1.56
TMED4-204ENST00000477639 PLCH1Q4KWH8 1693 aa24.78■■□□□ 1.56
TMED4-204ENST00000477639 MED23Q9ULK4 1368 aa24.77■■□□□ 1.56
TMED4-204ENST00000477639 A0A0D9SFI3 127 aa24.77■■□□□ 1.56
TMED4-204ENST00000477639 STX6O43752 255 aa24.77■■□□□ 1.56
TMED4-204ENST00000477639 ZKSCAN1P17029 563 aaPredicted RBP24.77■■□□□ 1.56
TMED4-204ENST00000477639 FSD1Q9BTV5 496 aa24.77■■□□□ 1.56
TMED4-204ENST00000477639 SH2B1Q9NRF2 756 aaPredicted RBP24.77■■□□□ 1.56
TMED4-204ENST00000477639 SLC27A2O14975 620 aa24.76■■□□□ 1.55
TMED4-204ENST00000477639 CASP7P55210 303 aa24.76■■□□□ 1.55
TMED4-204ENST00000477639 FOXD4L6Q3SYB3 417 aaPredicted RBP24.76■■□□□ 1.55
TMED4-204ENST00000477639 FOXD4L3Q6VB84 417 aaPredicted RBP24.76■■□□□ 1.55
TMED4-204ENST00000477639 GDPD2Q9HCC8 539 aa24.76■■□□□ 1.55
TMED4-204ENST00000477639 PRDM11Q9NQV5 511 aa24.76■■□□□ 1.55
TMED4-204ENST00000477639 TRPC5Q9UL62 973 aaPredicted RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms