RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 FAM177BA6PVY3 158 aa16.71■□□□□ 0.27
TOP3A-205ENST00000477508 RARSP54136 660 aaKnown RBP16.71■□□□□ 0.27
TOP3A-205ENST00000477508 DNAAF4Q8WXU2 420 aa16.71■□□□□ 0.27
TOP3A-205ENST00000477508 MYD88Q99836 296 aa16.71■□□□□ 0.27
TOP3A-205ENST00000477508 ADCY9O60503 1353 aa16.71■□□□□ 0.27
TOP3A-205ENST00000477508 ATP5J2-PTCD1G3V325 749 aa16.7■□□□□ 0.26
TOP3A-205ENST00000477508 H0YIN7 160 aa16.7■□□□□ 0.26
TOP3A-205ENST00000477508 NTSR2O95665 410 aa16.7■□□□□ 0.26
TOP3A-205ENST00000477508 HSP90B1P14625 803 aaKnown RBP16.7■□□□□ 0.26
TOP3A-205ENST00000477508 NLGN2Q8NFZ4 835 aa16.7■□□□□ 0.26
TOP3A-205ENST00000477508 CWC25Q9NXE8 425 aaPredicted RBP16.7■□□□□ 0.26
TOP3A-205ENST00000477508 TRMT112Q9UI30 125 aaKnown RBP16.7■□□□□ 0.26
TOP3A-205ENST00000477508 SLC10A5Q5PT55 438 aa16.69■□□□□ 0.26
TOP3A-205ENST00000477508 LINS1Q8NG48 757 aa16.69■□□□□ 0.26
TOP3A-205ENST00000477508 RIC1Q4ADV7 1423 aa16.69■□□□□ 0.26
TOP3A-205ENST00000477508 SH3TC1Q8TE82 1336 aa16.69■□□□□ 0.26
TOP3A-205ENST00000477508 KIF16BQ96L93 1317 aa16.69■□□□□ 0.26
TOP3A-205ENST00000477508 PXDNLA1KZ92 1463 aa16.68■□□□□ 0.26
TOP3A-205ENST00000477508 A0A0G2JLW4 131 aa16.68■□□□□ 0.26
TOP3A-205ENST00000477508 ERFEQ4G0M1 354 aa16.68■□□□□ 0.26
TOP3A-205ENST00000477508 BCL2L13Q9BXK5 485 aa16.68■□□□□ 0.26
TOP3A-205ENST00000477508 KLRG2A4D1S0 409 aaPredicted RBP16.67■□□□□ 0.26
TOP3A-205ENST00000477508 IPO8O15397 1037 aaKnown RBP16.67■□□□□ 0.26
TOP3A-205ENST00000477508 DPEP1P16444 411 aa16.67■□□□□ 0.26
TOP3A-205ENST00000477508 NUTM1Q86Y26 1132 aa16.67■□□□□ 0.26
TOP3A-205ENST00000477508 C2CD5Q86YS7 1000 aa16.67■□□□□ 0.26
TOP3A-205ENST00000477508 ZBTB38Q8NAP3 1195 aaPredicted RBP16.67■□□□□ 0.26
TOP3A-205ENST00000477508 PIM2Q9P1W9 311 aa16.67■□□□□ 0.26
TOP3A-205ENST00000477508 NEURL1BA8MQ27 555 aa16.66■□□□□ 0.26
TOP3A-205ENST00000477508 IGKV5-2P06315 115 aa16.66■□□□□ 0.26
TOP3A-205ENST00000477508 CCDC24Q8N4L8 307 aa16.66■□□□□ 0.26
TOP3A-205ENST00000477508 ARHGAP45Q92619 1136 aa16.66■□□□□ 0.26
TOP3A-205ENST00000477508 NLRP3Q96P20 1036 aa16.66■□□□□ 0.26
TOP3A-205ENST00000477508 F6X3S4 739 aa16.65■□□□□ 0.26
TOP3A-205ENST00000477508 PCCAP05165 728 aaPredicted RBP16.65■□□□□ 0.26
TOP3A-205ENST00000477508 KCNA3P22001 575 aa16.65■□□□□ 0.26
TOP3A-205ENST00000477508 CHRNA5P30532 468 aa16.65■□□□□ 0.26
TOP3A-205ENST00000477508 STYK1Q6J9G0 422 aa16.65■□□□□ 0.26
TOP3A-205ENST00000477508 MASTLQ96GX5 879 aa16.65■□□□□ 0.26
TOP3A-205ENST00000477508 YTHDC1Q96MU7 727 aaKnown RBP16.65■□□□□ 0.26
TOP3A-205ENST00000477508 API5Q9BZZ5 524 aaKnown RBP16.65■□□□□ 0.26
TOP3A-205ENST00000477508 ANKRD31Q8N7Z5 1873 aa16.65■□□□□ 0.26
TOP3A-205ENST00000477508 ALDH1L1O75891 902 aa16.64■□□□□ 0.25
TOP3A-205ENST00000477508 SRGNP10124 158 aa16.64■□□□□ 0.25
TOP3A-205ENST00000477508 NPR1P16066 1061 aa16.64■□□□□ 0.25
TOP3A-205ENST00000477508 GPR162Q16538 588 aa16.64■□□□□ 0.25
TOP3A-205ENST00000477508 DALRD3Q5D0E6 543 aaKnown RBP16.64■□□□□ 0.25
TOP3A-205ENST00000477508 BEND3Q5T5X7 828 aa16.64■□□□□ 0.25
TOP3A-205ENST00000477508 SLC4A10Q6U841 1118 aa16.64■□□□□ 0.25
TOP3A-205ENST00000477508 CNKSR1Q969H4 720 aa16.64■□□□□ 0.25
TOP3A-205ENST00000477508 FAM89AQ96GI7 184 aa16.64■□□□□ 0.25
TOP3A-205ENST00000477508 NOB1Q9ULX3 412 aaKnown RBP16.64■□□□□ 0.25
TOP3A-205ENST00000477508 KIAA1551Q9HCM1 1747 aa16.64■□□□□ 0.25
TOP3A-205ENST00000477508 N4BP2Q86UW6 1770 aaPredicted RBP16.64■□□□□ 0.25
TOP3A-205ENST00000477508 ABCC12Q96J65 1359 aa16.64■□□□□ 0.25
TOP3A-205ENST00000477508 GRIN3BO60391 1043 aa16.63■□□□□ 0.25
TOP3A-205ENST00000477508 GCKRQ14397 625 aa16.63■□□□□ 0.25
TOP3A-205ENST00000477508 CWF19L2Q2TBE0 894 aaKnown RBP16.63■□□□□ 0.25
TOP3A-205ENST00000477508 CRY2Q49AN0 593 aa16.63■□□□□ 0.25
TOP3A-205ENST00000477508 TTLL6Q8N841 843 aa16.63■□□□□ 0.25
TOP3A-205ENST00000477508 SRCIN1Q9C0H9 1055 aa16.63■□□□□ 0.25
TOP3A-205ENST00000477508 IRS4O14654 1257 aaPredicted RBP16.62■□□□□ 0.25
TOP3A-205ENST00000477508 ALDH1B1P30837 517 aa16.62■□□□□ 0.25
TOP3A-205ENST00000477508 RPGRQ92834 1020 aaKnown RBP16.62■□□□□ 0.25
TOP3A-205ENST00000477508 ZNF622Q969S3 477 aaKnown RBP eCLIP16.62■□□□□ 0.25
TOP3A-205ENST00000477508 CDHR2Q9BYE9 1310 aa16.62■□□□□ 0.25
TOP3A-205ENST00000477508 DLEC1Q9Y238 1755 aa16.61■□□□□ 0.25
TOP3A-205ENST00000477508 H7C1W4 665 aa16.61■□□□□ 0.25
TOP3A-205ENST00000477508 BCAR3O75815 825 aa16.61■□□□□ 0.25
TOP3A-205ENST00000477508 HCLS1P14317 486 aaPredicted RBP16.61■□□□□ 0.25
TOP3A-205ENST00000477508 HOXA10P31260 410 aaPredicted RBP16.61■□□□□ 0.25
TOP3A-205ENST00000477508 CCT4P50991 539 aaKnown RBP16.61■□□□□ 0.25
TOP3A-205ENST00000477508 PELP1Q8IZL8 1130 aaKnown RBP16.61■□□□□ 0.25
TOP3A-205ENST00000477508 BRCA1P38398 1863 aaKnown RBP16.61■□□□□ 0.25
TOP3A-205ENST00000477508 PDE8AO60658 829 aa16.6■□□□□ 0.25
TOP3A-205ENST00000477508 SYNE4Q8N205 404 aa16.6■□□□□ 0.25
TOP3A-205ENST00000477508 RBM17Q96I25 401 aaKnown RBP16.6■□□□□ 0.25
TOP3A-205ENST00000477508 CRAMP1Q96RY5 1269 aa16.6■□□□□ 0.25
TOP3A-205ENST00000477508 BCS1LQ9Y276 419 aa16.6■□□□□ 0.25
TOP3A-205ENST00000477508 GRM8O00222 908 aa16.59■□□□□ 0.25
TOP3A-205ENST00000477508 SF3B3Q15393 1217 aaKnown RBP16.59■□□□□ 0.25
TOP3A-205ENST00000477508 RTL5Q5HYW3 569 aaPredicted RBP16.59■□□□□ 0.25
TOP3A-205ENST00000477508 ZKSCAN2Q63HK3 967 aa16.59■□□□□ 0.25
TOP3A-205ENST00000477508 ATF7IPQ6VMQ6 1270 aa16.59■□□□□ 0.25
TOP3A-205ENST00000477508 UBE3BQ7Z3V4 1068 aa16.59■□□□□ 0.25
TOP3A-205ENST00000477508 FRAT1Q92837 279 aaPredicted RBP16.59■□□□□ 0.25
TOP3A-205ENST00000477508 C9orf78Q9NZ63 289 aaPredicted RBP16.59■□□□□ 0.25
TOP3A-205ENST00000477508 RCAN3Q9UKA8 241 aa16.59■□□□□ 0.25
TOP3A-205ENST00000477508 GOLGB1Q14789 3259 aaKnown RBP16.58■□□□□ 0.24
TOP3A-205ENST00000477508 SOGA3Q5TF21 947 aa16.58■□□□□ 0.24
TOP3A-205ENST00000477508 COL11A2P13942 1736 aaPredicted RBP16.57■□□□□ 0.24
TOP3A-205ENST00000477508 TNRC6CQ9HCJ0 1690 aaKnown RBP16.57■□□□□ 0.24
TOP3A-205ENST00000477508 YBX3P16989 372 aaKnown RBP eCLIP16.57■□□□□ 0.24
TOP3A-205ENST00000477508 CCDC152Q4G0S7 254 aa16.57■□□□□ 0.24
TOP3A-205ENST00000477508 DDX46Q7L014 1031 aaKnown RBP16.57■□□□□ 0.24
TOP3A-205ENST00000477508 PLA2G12BQ9BX93 195 aa16.57■□□□□ 0.24
TOP3A-205ENST00000477508 LAMB2P55268 1798 aa16.56■□□□□ 0.24
TOP3A-205ENST00000477508 DDX60Q8IY21 1712 aaKnown RBP16.56■□□□□ 0.24
TOP3A-205ENST00000477508 MYCNP04198 464 aaPredicted RBP16.56■□□□□ 0.24
TOP3A-205ENST00000477508 MS4A1P11836 297 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms