RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ANKRD17O75179 2603 aaKnown RBP3.74□□□□□ -1.81
HMGN4-202ENST00000477243 MADDQ8WXG6 1647 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 ABCA2Q9BZC7 2435 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 FOXO3O43524 673 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 NR1I2O75469 434 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 VIL1P09327 827 aaKnown RBP3.73□□□□□ -1.81
HMGN4-202ENST00000477243 CD44P16070 742 aaKnown RBP3.73□□□□□ -1.81
HMGN4-202ENST00000477243 NOS2P35228 1153 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 HDGFP51858 240 aaKnown RBP3.73□□□□□ -1.81
HMGN4-202ENST00000477243 EXOSC10Q01780 885 aaKnown RBP3.73□□□□□ -1.81
HMGN4-202ENST00000477243 VPS72Q15906 364 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 ZNF394Q53GI3 561 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 IER5LQ5T953 404 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 TMEM92Q6UXU6 159 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 C11orf96Q7Z7L8 435 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 ALYREFQ86V81 257 aaKnown RBP3.73□□□□□ -1.81
HMGN4-202ENST00000477243 HOMER1Q86YM7 354 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 ARMC2Q8NEN0 867 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 TPCN2Q8NHX9 752 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 GPKOWQ92917 476 aaPredicted RBP eCLIP3.73□□□□□ -1.81
HMGN4-202ENST00000477243 GPRASP2Q96D09 838 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 APBA2Q99767 749 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 SRA1Q9HD15 236 aaKnown RBP3.73□□□□□ -1.81
HMGN4-202ENST00000477243 NEUROD4Q9HD90 331 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 BMP2KQ9NSY1 1161 aaPredicted RBP3.73□□□□□ -1.81
HMGN4-202ENST00000477243 GGT7Q9UJ14 662 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 PNMA3Q9UL41 463 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 DOLKQ9UPQ8 538 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 SPG7Q9UQ90 795 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 PCDHB9Q9Y5E1 797 aa3.73□□□□□ -1.81
HMGN4-202ENST00000477243 AQRO60306 1485 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGN4-202ENST00000477243 TEP1Q99973 2627 aaKnown RBP3.73□□□□□ -1.81
HMGN4-202ENST00000477243 KIF7Q2M1P5 1343 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 EPG5Q9HCE0 2579 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 SFI1A8K8P3 1242 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 KRT18P05783 430 aaKnown RBP3.72□□□□□ -1.81
HMGN4-202ENST00000477243 MCCP23508 829 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 ATP6V1AP38606 617 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 USP5P45974 858 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 GYS2P54840 703 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 IRX5P78411 483 aaPredicted RBP3.72□□□□□ -1.81
HMGN4-202ENST00000477243 MAP3K12Q12852 859 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 NFX1Q12986 1120 aaKnown RBP3.72□□□□□ -1.81
HMGN4-202ENST00000477243 USP4Q13107 963 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 FKBP5Q13451 457 aaPredicted RBP3.72□□□□□ -1.81
HMGN4-202ENST00000477243 CNGB1Q14028 1251 aaPredicted RBP3.72□□□□□ -1.81
HMGN4-202ENST00000477243 NAA30Q147X3 362 aaPredicted RBP3.72□□□□□ -1.81
HMGN4-202ENST00000477243 PPP2R5AQ15172 486 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 ENOX2Q16206 610 aaKnown RBP3.72□□□□□ -1.81
HMGN4-202ENST00000477243 Q3C1V9 767 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 NBPF14Q5TI25 921 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 PDXDC2PQ6P474 469 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 NBPF15Q8N660 670 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 SAMD3Q8N6K7 520 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 ZNF454Q8N9F8 522 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 RASGRP4Q8TDF6 673 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 FAM129BQ96TA1 746 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 MTA3Q9BTC8 594 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 ANAPC4Q9UJX5 808 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 R3HCC1Q9Y3T6 440 aaKnown RBP3.72□□□□□ -1.81
HMGN4-202ENST00000477243 PCDHGA4Q9Y5G9 962 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 EID1Q9Y6B2 187 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 FANCD2Q9BXW9 1451 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 SHANK2Q9UPX8 1470 aa3.72□□□□□ -1.81
HMGN4-202ENST00000477243 URB2Q14146 1524 aaKnown RBP3.71□□□□□ -1.82
HMGN4-202ENST00000477243 CCDC189A1A4V9 331 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 EXOC5O00471 708 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 GIPC1O14908 333 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 PLCG2P16885 1265 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 IGFBP4P22692 258 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 EIF4BP23588 611 aaKnown RBP3.71□□□□□ -1.82
HMGN4-202ENST00000477243 MPSTP25325 297 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 ZEB1P37275 1124 aaPredicted RBP3.71□□□□□ -1.82
HMGN4-202ENST00000477243 FXR2P51116 673 aaKnown RBP eCLIP3.71□□□□□ -1.82
HMGN4-202ENST00000477243 FOXD4Q12950 439 aaPredicted RBP3.71□□□□□ -1.82
HMGN4-202ENST00000477243 PAK2Q13177 524 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 BRD3Q15059 726 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 MAP9Q49MG5 647 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 AMOTL1Q8IY63 956 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 GAS2L2Q8NHY3 880 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 HLA-CQ95604 372 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 CCDC85AQ96PX6 553 aaPredicted RBP3.71□□□□□ -1.82
HMGN4-202ENST00000477243 IER2Q9BTL4 223 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 QTRT2Q9H974 415 aaKnown RBP3.71□□□□□ -1.82
HMGN4-202ENST00000477243 CCDC87Q9NVE4 849 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 FANCLQ9NW38 375 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 FAM198AQ9UFP1 575 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 STRIP2Q9ULQ0 834 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 TTF2Q9UNY4 1162 aaKnown RBP3.71□□□□□ -1.82
HMGN4-202ENST00000477243 KIAA1024Q9UPX6 916 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 PCDHGB7Q9Y5F8 929 aa3.71□□□□□ -1.82
HMGN4-202ENST00000477243 PNMA6FA0A0J9YX94 578 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 IFRD1O00458 451 aaPredicted RBP3.7□□□□□ -1.82
HMGN4-202ENST00000477243 MZF1P28698 734 aaPredicted RBP3.7□□□□□ -1.82
HMGN4-202ENST00000477243 MAN1A1P33908 653 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 MASP1P48740 699 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 POU5F1BQ06416 359 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 RAB33AQ14088 237 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 DHX8Q14562 1220 aaKnown RBP3.7□□□□□ -1.82
HMGN4-202ENST00000477243 TAF1CQ15572 869 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms