RNA–Protein interactions for RNA: ENST00000477063.5

SEC22A-205, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 759 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-205ENST00000477063 FBXO3Q9UK99 471 aa16.41■□□□□ 0.22
SEC22A-205ENST00000477063 ZNF652Q9Y2D9 606 aa16.41■□□□□ 0.22
SEC22A-205ENST00000477063 PARP10Q53GL7 1025 aa16.4■□□□□ 0.22
SEC22A-205ENST00000477063 UBE3BQ7Z3V4 1068 aa16.4■□□□□ 0.22
SEC22A-205ENST00000477063 SKAP1Q86WV1 359 aa16.4■□□□□ 0.22
SEC22A-205ENST00000477063 PLEKHM2Q8IWE5 1019 aa16.4■□□□□ 0.22
SEC22A-205ENST00000477063 ZBTB38Q8NAP3 1195 aaPredicted RBP16.4■□□□□ 0.22
SEC22A-205ENST00000477063 ATP5J2-PTCD1G3V325 749 aa16.39■□□□□ 0.21
SEC22A-205ENST00000477063 SLC27A3Q5K4L6 730 aa16.39■□□□□ 0.21
SEC22A-205ENST00000477063 RHPN1Q8TCX5 695 aa16.39■□□□□ 0.21
SEC22A-205ENST00000477063 STAP2Q9UGK3 403 aa16.39■□□□□ 0.21
SEC22A-205ENST00000477063 EXOC6BQ9Y2D4 811 aa16.39■□□□□ 0.21
SEC22A-205ENST00000477063 SCN7AQ01118 1682 aa16.39■□□□□ 0.21
SEC22A-205ENST00000477063 ZNF34Q8IZ26 560 aa16.38■□□□□ 0.21
SEC22A-205ENST00000477063 ZNF330Q9Y3S2 320 aaPredicted RBP16.38■□□□□ 0.21
SEC22A-205ENST00000477063 SALL3Q9BXA9 1300 aa16.38■□□□□ 0.21
SEC22A-205ENST00000477063 MYH3P11055 1940 aa16.37■□□□□ 0.21
SEC22A-205ENST00000477063 RPS6KA4O75676 772 aa16.37■□□□□ 0.21
SEC22A-205ENST00000477063 G3BP1Q13283 466 aaKnown RBP eCLIP16.37■□□□□ 0.21
SEC22A-205ENST00000477063 NLRP10Q86W26 655 aa16.37■□□□□ 0.21
SEC22A-205ENST00000477063 CCNL1Q9UK58 526 aaPredicted RBP16.37■□□□□ 0.21
SEC22A-205ENST00000477063 CAMTA2O94983 1202 aa16.36■□□□□ 0.21
SEC22A-205ENST00000477063 FOXO4P98177 505 aa16.36■□□□□ 0.21
SEC22A-205ENST00000477063 TTC22Q5TAA0 569 aa16.36■□□□□ 0.21
SEC22A-205ENST00000477063 CLASRPQ8N2M8 674 aaKnown RBP16.36■□□□□ 0.21
SEC22A-205ENST00000477063 LINC00116Q8NCU8 138 aa16.36■□□□□ 0.21
SEC22A-205ENST00000477063 UPF2Q9HAU5 1272 aaKnown RBP16.36■□□□□ 0.21
SEC22A-205ENST00000477063 TTC41PQ6P2S7 1318 aa16.36■□□□□ 0.21
SEC22A-205ENST00000477063 USP42Q9H9J4 1324 aaKnown RBP16.36■□□□□ 0.21
SEC22A-205ENST00000477063 RGPD3A6NKT7 1758 aaPredicted RBP16.36■□□□□ 0.21
SEC22A-205ENST00000477063 LAMB2P55268 1798 aa16.36■□□□□ 0.21
SEC22A-205ENST00000477063 RGPD4Q7Z3J3 1758 aa16.36■□□□□ 0.21
SEC22A-205ENST00000477063 MX1P20591 662 aa16.35■□□□□ 0.21
SEC22A-205ENST00000477063 RXRBP28702 533 aa16.35■□□□□ 0.21
SEC22A-205ENST00000477063 PDE1AP54750 535 aa16.35■□□□□ 0.21
SEC22A-205ENST00000477063 OS9Q13438 667 aaPredicted RBP16.35■□□□□ 0.21
SEC22A-205ENST00000477063 C4BP0C0L5 1744 aa16.35■□□□□ 0.21
SEC22A-205ENST00000477063 TUBGCP6Q96RT7 1819 aa16.34■□□□□ 0.21
SEC22A-205ENST00000477063 CSF1RP07333 972 aa16.34■□□□□ 0.21
SEC22A-205ENST00000477063 RFX5P48382 616 aaPredicted RBP16.34■□□□□ 0.21
SEC22A-205ENST00000477063 HLFQ16534 295 aa16.34■□□□□ 0.21
SEC22A-205ENST00000477063 GPATCH3Q96I76 525 aa16.34■□□□□ 0.21
SEC22A-205ENST00000477063 CIAO1O76071 339 aa16.33■□□□□ 0.2
SEC22A-205ENST00000477063 EPHA10Q5JZY3 1008 aa16.33■□□□□ 0.2
SEC22A-205ENST00000477063 GPR108Q9NPR9 543 aa16.33■□□□□ 0.2
SEC22A-205ENST00000477063 TBC1D2BQ9UPU7 963 aa16.33■□□□□ 0.2
SEC22A-205ENST00000477063 SMARCA5O60264 1052 aaPredicted RBP16.32■□□□□ 0.2
SEC22A-205ENST00000477063 ANP32AP39687 249 aaKnown RBP16.32■□□□□ 0.2
SEC22A-205ENST00000477063 PTPN12Q05209 780 aaKnown RBP16.32■□□□□ 0.2
SEC22A-205ENST00000477063 CASC1Q6TDU7 716 aa16.32■□□□□ 0.2
SEC22A-205ENST00000477063 LMBR1LQ6UX01 489 aa16.32■□□□□ 0.2
SEC22A-205ENST00000477063 ARXQ96QS3 562 aa16.32■□□□□ 0.2
SEC22A-205ENST00000477063 NARFQ9UHQ1 456 aa16.32■□□□□ 0.2
SEC22A-205ENST00000477063 RTCBQ9Y3I0 505 aaKnown RBP16.32■□□□□ 0.2
SEC22A-205ENST00000477063 SH3TC1Q8TE82 1336 aa16.31■□□□□ 0.2
SEC22A-205ENST00000477063 ERC2O15083 957 aa16.31■□□□□ 0.2
SEC22A-205ENST00000477063 PLSCR1O15162 318 aa16.31■□□□□ 0.2
SEC22A-205ENST00000477063 PDE8AO60658 829 aa16.31■□□□□ 0.2
SEC22A-205ENST00000477063 CDC45O75419 566 aa16.31■□□□□ 0.2
SEC22A-205ENST00000477063 IL15P40933 162 aaPredicted RBP16.31■□□□□ 0.2
SEC22A-205ENST00000477063 RGS17Q9UGC6 210 aaPredicted RBP16.31■□□□□ 0.2
SEC22A-205ENST00000477063 COL24A1Q17RW2 1714 aa16.31■□□□□ 0.2
SEC22A-205ENST00000477063 RTL9Q8NET4 1388 aa16.3■□□□□ 0.2
SEC22A-205ENST00000477063 APBB1O00213 710 aa16.3■□□□□ 0.2
SEC22A-205ENST00000477063 CCDC57Q2TAC2 916 aa16.3■□□□□ 0.2
SEC22A-205ENST00000477063 UTP14AQ9BVJ6 771 aaKnown RBP16.3■□□□□ 0.2
SEC22A-205ENST00000477063 TRMT112Q9UI30 125 aaKnown RBP16.3■□□□□ 0.2
SEC22A-205ENST00000477063 UBN2Q6ZU65 1347 aa16.29■□□□□ 0.2
SEC22A-205ENST00000477063 GLRX3O76003 335 aaKnown RBP16.29■□□□□ 0.2
SEC22A-205ENST00000477063 GSPT1P15170 499 aaKnown RBP16.29■□□□□ 0.2
SEC22A-205ENST00000477063 PTF1AQ7RTS3 328 aa16.29■□□□□ 0.2
SEC22A-205ENST00000477063 TICAM2Q86XR7 235 aa16.29■□□□□ 0.2
SEC22A-205ENST00000477063 C16orf71Q8IYS4 520 aaPredicted RBP16.29■□□□□ 0.2
SEC22A-205ENST00000477063 C4AP0C0L4 1744 aa16.28■□□□□ 0.2
SEC22A-205ENST00000477063 IRS4O14654 1257 aaPredicted RBP16.28■□□□□ 0.2
SEC22A-205ENST00000477063 SASH1O94885 1247 aa16.28■□□□□ 0.2
SEC22A-205ENST00000477063 IFIT2P09913 472 aaKnown RBP16.28■□□□□ 0.2
SEC22A-205ENST00000477063 CTSWP56202 376 aa16.28■□□□□ 0.2
SEC22A-205ENST00000477063 FAM89AQ96GI7 184 aa16.28■□□□□ 0.2
SEC22A-205ENST00000477063 NYXQ9GZU5 481 aa16.28■□□□□ 0.2
SEC22A-205ENST00000477063 PA2G4Q9UQ80 394 aaKnown RBP16.28■□□□□ 0.2
SEC22A-205ENST00000477063 UBR3Q6ZT12 1888 aa16.28■□□□□ 0.2
SEC22A-205ENST00000477063 EYA2O00167 538 aa16.27■□□□□ 0.2
SEC22A-205ENST00000477063 GNPATO15228 680 aa16.27■□□□□ 0.2
SEC22A-205ENST00000477063 EPB41L2O43491 1005 aaKnown RBP16.27■□□□□ 0.2
SEC22A-205ENST00000477063 ZPR1O75312 459 aa16.27■□□□□ 0.2
SEC22A-205ENST00000477063 GPTP24298 496 aa16.27■□□□□ 0.2
SEC22A-205ENST00000477063 SSFA2P28290 1259 aa16.27■□□□□ 0.2
SEC22A-205ENST00000477063 IFIT5Q13325 482 aaKnown RBP16.27■□□□□ 0.2
SEC22A-205ENST00000477063 FAM182BQ5T319 152 aa16.27■□□□□ 0.2
SEC22A-205ENST00000477063 PIAS4Q8N2W9 510 aaPredicted RBP16.27■□□□□ 0.2
SEC22A-205ENST00000477063 OTUD7AQ8TE49 926 aaPredicted RBP16.27■□□□□ 0.2
SEC22A-205ENST00000477063 DDRGK1Q96HY6 314 aa16.27■□□□□ 0.2
SEC22A-205ENST00000477063 IL1RAPL2Q9NP60 686 aa16.27■□□□□ 0.2
SEC22A-205ENST00000477063 ECHDC1Q9NTX5 307 aa16.27■□□□□ 0.2
SEC22A-205ENST00000477063 NIP7Q9Y221 180 aaKnown RBP eCLIP16.27■□□□□ 0.2
SEC22A-205ENST00000477063 DDX60Q8IY21 1712 aaKnown RBP16.27■□□□□ 0.19
SEC22A-205ENST00000477063 LRP5O75197 1615 aa16.27■□□□□ 0.19
SEC22A-205ENST00000477063 AK9Q5TCS8 1911 aa16.26■□□□□ 0.19
SEC22A-205ENST00000477063 MSH5O43196 834 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms