RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 MYBBP1AQ9BQG0 1328 aaKnown RBP15.32■□□□□ 0.04
VARS2-208ENST00000477052 IARSP41252 1262 aaKnown RBP15.31■□□□□ 0.04
VARS2-208ENST00000477052 EAPPQ56P03 285 aaPredicted RBP15.31■□□□□ 0.04
VARS2-208ENST00000477052 TAF1DQ9H5J8 278 aaPredicted RBP15.31■□□□□ 0.04
VARS2-208ENST00000477052 COL4A5P29400 1685 aa15.31■□□□□ 0.04
VARS2-208ENST00000477052 PCNTO95613 3336 aa15.3■□□□□ 0.04
VARS2-208ENST00000477052 COL13A1Q5TAT6 717 aaPredicted RBP15.3■□□□□ 0.04
VARS2-208ENST00000477052 COPS6Q7L5N1 327 aa15.3■□□□□ 0.04
VARS2-208ENST00000477052 XAGE3Q8WTP9 111 aa15.3■□□□□ 0.04
VARS2-208ENST00000477052 TRIM35Q9UPQ4 493 aa15.3■□□□□ 0.04
VARS2-208ENST00000477052 SNED1Q8TER0 1413 aa15.29■□□□□ 0.04
VARS2-208ENST00000477052 ERBB4Q15303 1308 aa15.29■□□□□ 0.04
VARS2-208ENST00000477052 RNF123Q5XPI4 1314 aa15.29■□□□□ 0.04
VARS2-208ENST00000477052 MKRN1Q9UHC7 482 aaKnown RBP15.29■□□□□ 0.04
VARS2-208ENST00000477052 ADAMTS8Q9UP79 889 aa15.29■□□□□ 0.04
VARS2-208ENST00000477052 PPEF1O14829 653 aaPredicted RBP15.28■□□□□ 0.04
VARS2-208ENST00000477052 HCLS1P14317 486 aaPredicted RBP15.28■□□□□ 0.04
VARS2-208ENST00000477052 HOXA10P31260 410 aaPredicted RBP15.28■□□□□ 0.04
VARS2-208ENST00000477052 WDR43Q15061 677 aaKnown RBP eCLIP15.28■□□□□ 0.04
VARS2-208ENST00000477052 PPP1R42Q7Z4L9 355 aa15.28■□□□□ 0.04
VARS2-208ENST00000477052 RBM17Q96I25 401 aaKnown RBP15.28■□□□□ 0.04
VARS2-208ENST00000477052 L3MBTL3Q96JM7 780 aaPredicted RBP15.28■□□□□ 0.04
VARS2-208ENST00000477052 UTP14AQ9BVJ6 771 aaKnown RBP15.28■□□□□ 0.04
VARS2-208ENST00000477052 CLEC11AQ9Y240 323 aa15.28■□□□□ 0.04
VARS2-208ENST00000477052 GJA3Q9Y6H8 435 aa15.28■□□□□ 0.04
VARS2-208ENST00000477052 IQCA1LA6NCM1 817 aa15.27■□□□□ 0.04
VARS2-208ENST00000477052 FZD9O00144 591 aa15.27■□□□□ 0.04
VARS2-208ENST00000477052 CHL1O00533 1208 aa15.27■□□□□ 0.04
VARS2-208ENST00000477052 LMOD3Q0VAK6 560 aa15.27■□□□□ 0.04
VARS2-208ENST00000477052 RUNDC1Q96C34 613 aa15.27■□□□□ 0.04
VARS2-208ENST00000477052 CHPF2Q9P2E5 772 aa15.27■□□□□ 0.04
VARS2-208ENST00000477052 HACL1Q9UJ83 578 aa15.27■□□□□ 0.04
VARS2-208ENST00000477052 IBTKQ9P2D0 1353 aaPredicted RBP15.26■□□□□ 0.03
VARS2-208ENST00000477052 HSPA1AP0DMV8 641 aaKnown RBP15.26■□□□□ 0.03
VARS2-208ENST00000477052 HSPA1BP0DMV9 641 aaKnown RBP15.26■□□□□ 0.03
VARS2-208ENST00000477052 EPHX2P34913 555 aa15.26■□□□□ 0.03
VARS2-208ENST00000477052 PARP10Q53GL7 1025 aa15.26■□□□□ 0.03
VARS2-208ENST00000477052 NLRP10Q86W26 655 aa15.26■□□□□ 0.03
VARS2-208ENST00000477052 LDHDQ86WU2 507 aa15.26■□□□□ 0.03
VARS2-208ENST00000477052 NLRP3Q96P20 1036 aa15.26■□□□□ 0.03
VARS2-208ENST00000477052 CRAMP1Q96RY5 1269 aa15.26■□□□□ 0.03
VARS2-208ENST00000477052 PSMD1Q99460 953 aa15.26■□□□□ 0.03
VARS2-208ENST00000477052 MAP1SQ66K74 1059 aaPredicted RBP15.25■□□□□ 0.03
VARS2-208ENST00000477052 LARGE2Q8N3Y3 721 aa15.25■□□□□ 0.03
VARS2-208ENST00000477052 JDP2Q8WYK2 163 aa15.25■□□□□ 0.03
VARS2-208ENST00000477052 BABAM1Q9NWV8 329 aa15.25■□□□□ 0.03
VARS2-208ENST00000477052 RIC1Q4ADV7 1423 aa15.25■□□□□ 0.03
VARS2-208ENST00000477052 SCN4AP35499 1836 aa15.24■□□□□ 0.03
VARS2-208ENST00000477052 ABCC4O15439 1325 aa15.24■□□□□ 0.03
VARS2-208ENST00000477052 ITGBL1O95965 494 aaPredicted RBP15.24■□□□□ 0.03
VARS2-208ENST00000477052 AOC3Q16853 763 aa15.24■□□□□ 0.03
VARS2-208ENST00000477052 DDX21Q9NR30 783 aaKnown RBP eCLIP15.24■□□□□ 0.03
VARS2-208ENST00000477052 CREBZFQ9NS37 354 aa15.24■□□□□ 0.03
VARS2-208ENST00000477052 PASKQ96RG2 1323 aa15.23■□□□□ 0.03
VARS2-208ENST00000477052 EIF6P56537 245 aaKnown RBP15.23■□□□□ 0.03
VARS2-208ENST00000477052 FMR1Q06787 632 aaKnown RBP eCLIP15.23■□□□□ 0.03
VARS2-208ENST00000477052 TCIRG1Q13488 830 aa15.23■□□□□ 0.03
VARS2-208ENST00000477052 RTL5Q5HYW3 569 aaPredicted RBP15.23■□□□□ 0.03
VARS2-208ENST00000477052 SLC10A5Q5PT55 438 aa15.23■□□□□ 0.03
VARS2-208ENST00000477052 HDGFL1Q5TGJ6 251 aa15.23■□□□□ 0.03
VARS2-208ENST00000477052 GPC2Q8N158 579 aa15.23■□□□□ 0.03
VARS2-208ENST00000477052 TRMT112Q9UI30 125 aaKnown RBP15.23■□□□□ 0.03
VARS2-208ENST00000477052 LTBP1Q14766 1721 aa15.23■□□□□ 0.03
VARS2-208ENST00000477052 TAF1P21675 1872 aa15.23■□□□□ 0.03
VARS2-208ENST00000477052 LAMB2P55268 1798 aa15.22■□□□□ 0.03
VARS2-208ENST00000477052 ANKRD36CQ5JPF3 1778 aa15.22■□□□□ 0.03
VARS2-208ENST00000477052 ATP5J2-PTCD1G3V325 749 aa15.22■□□□□ 0.03
VARS2-208ENST00000477052 PPIP5K2O43314 1243 aa15.22■□□□□ 0.03
VARS2-208ENST00000477052 CAPN15O75808 1086 aa15.22■□□□□ 0.03
VARS2-208ENST00000477052 EPS15P42566 896 aa15.22■□□□□ 0.03
VARS2-208ENST00000477052 CC2D2BQ6DHV5 1058 aa15.22■□□□□ 0.03
VARS2-208ENST00000477052 PRKRIP1Q9H875 184 aaPredicted RBP15.22■□□□□ 0.03
VARS2-208ENST00000477052 ATP6V0A2Q9Y487 856 aa15.22■□□□□ 0.03
VARS2-208ENST00000477052 ELL2O00472 640 aaPredicted RBP15.21■□□□□ 0.03
VARS2-208ENST00000477052 DUSP27Q5VZP5 1158 aa15.21■□□□□ 0.03
VARS2-208ENST00000477052 NIM1KQ8IY84 436 aa15.21■□□□□ 0.03
VARS2-208ENST00000477052 CNTROBQ8N137 903 aa15.21■□□□□ 0.03
VARS2-208ENST00000477052 MBIPQ9NS73 344 aa15.21■□□□□ 0.03
VARS2-208ENST00000477052 APAF1O14727 1248 aa15.2■□□□□ 0.02
VARS2-208ENST00000477052 SCNN1DP51172 638 aa15.2■□□□□ 0.02
VARS2-208ENST00000477052 HSP90AB3PQ58FF7 597 aa15.2■□□□□ 0.02
VARS2-208ENST00000477052 FAM89AQ96GI7 184 aa15.2■□□□□ 0.02
VARS2-208ENST00000477052 ADAMTSL1Q8N6G6 1762 aa15.2■□□□□ 0.02
VARS2-208ENST00000477052 SH3TC1Q8TE82 1336 aa15.19■□□□□ 0.02
VARS2-208ENST00000477052 PNMA8AQ86V59 439 aaPredicted RBP15.19■□□□□ 0.02
VARS2-208ENST00000477052 COL4A1P02462 1669 aa15.19■□□□□ 0.02
VARS2-208ENST00000477052 TMEM88BA6NKF7 163 aa15.18■□□□□ 0.02
VARS2-208ENST00000477052 LMOD1P29536 600 aaPredicted RBP15.18■□□□□ 0.02
VARS2-208ENST00000477052 VEGFBP49765 207 aa15.18■□□□□ 0.02
VARS2-208ENST00000477052 CCDC184Q52MB2 194 aa15.18■□□□□ 0.02
VARS2-208ENST00000477052 DPP8Q6V1X1 898 aaPredicted RBP15.18■□□□□ 0.02
VARS2-208ENST00000477052 ANKRD13DQ6ZTN6 518 aa15.18■□□□□ 0.02
VARS2-208ENST00000477052 DDX46Q7L014 1031 aaKnown RBP15.18■□□□□ 0.02
VARS2-208ENST00000477052 TNS4Q8IZW8 715 aa15.18■□□□□ 0.02
VARS2-208ENST00000477052 PLBD2Q8NHP8 589 aa15.18■□□□□ 0.02
VARS2-208ENST00000477052 CFAP44Q96MT7 982 aa15.18■□□□□ 0.02
VARS2-208ENST00000477052 TMX4Q9H1E5 349 aaPredicted RBP15.18■□□□□ 0.02
VARS2-208ENST00000477052 PHAXQ9H814 394 aaKnown RBP15.18■□□□□ 0.02
VARS2-208ENST00000477052 CNTNAP1P78357 1384 aa15.18■□□□□ 0.02
VARS2-208ENST00000477052 TRAF5O00463 557 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms