RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 PROSER3Q2NL68 480 aa23.39■■□□□ 1.33
ABCB1-204ENST00000476862 RBM17Q96I25 401 aaKnown RBP23.39■■□□□ 1.33
ABCB1-204ENST00000476862 FSTL1Q12841 308 aa23.38■■□□□ 1.33
ABCB1-204ENST00000476862 CHMP4AQ9BY43 222 aa23.38■■□□□ 1.33
ABCB1-204ENST00000476862 DBF4Q9UBU7 674 aaPredicted RBP23.38■■□□□ 1.33
ABCB1-204ENST00000476862 FKBP4Q02790 459 aaKnown RBP eCLIP23.37■■□□□ 1.33
ABCB1-204ENST00000476862 C7orf43Q8WVR3 580 aa23.37■■□□□ 1.33
ABCB1-204ENST00000476862 IFT57Q9NWB7 429 aa23.37■■□□□ 1.33
ABCB1-204ENST00000476862 CHPF2Q9P2E5 772 aa23.37■■□□□ 1.33
ABCB1-204ENST00000476862 NTSR2O95665 410 aa23.36■■□□□ 1.33
ABCB1-204ENST00000476862 CRY2Q49AN0 593 aa23.36■■□□□ 1.33
ABCB1-204ENST00000476862 DUSP27Q5VZP5 1158 aa23.36■■□□□ 1.33
ABCB1-204ENST00000476862 CC2D2BQ6DHV5 1058 aa23.36■■□□□ 1.33
ABCB1-204ENST00000476862 LRP10Q7Z4F1 713 aa23.36■■□□□ 1.33
ABCB1-204ENST00000476862 SMC1BQ8NDV3 1235 aa23.36■■□□□ 1.33
ABCB1-204ENST00000476862 MBIPQ9NS73 344 aa23.36■■□□□ 1.33
ABCB1-204ENST00000476862 HYPKQ9NX55 129 aa23.36■■□□□ 1.33
ABCB1-204ENST00000476862 ABCC12Q96J65 1359 aa23.36■■□□□ 1.33
ABCB1-204ENST00000476862 RNF123Q5XPI4 1314 aa23.34■■□□□ 1.33
ABCB1-204ENST00000476862 TCIRG1Q13488 830 aa23.34■■□□□ 1.33
ABCB1-204ENST00000476862 GRIPAP1Q4V328 841 aa23.34■■□□□ 1.33
ABCB1-204ENST00000476862 TRMT112Q9UI30 125 aaKnown RBP23.34■■□□□ 1.33
ABCB1-204ENST00000476862 RIC1Q4ADV7 1423 aa23.33■■□□□ 1.33
ABCB1-204ENST00000476862 ANKRD13DQ6ZTN6 518 aa23.33■■□□□ 1.33
ABCB1-204ENST00000476862 SYNE4Q8N205 404 aa23.33■■□□□ 1.33
ABCB1-204ENST00000476862 CRAMP1Q96RY5 1269 aa23.33■■□□□ 1.33
ABCB1-204ENST00000476862 ZNF277Q9NRM2 450 aaPredicted RBP23.33■■□□□ 1.33
ABCB1-204ENST00000476862 HOXA10P31260 410 aaPredicted RBP23.32■■□□□ 1.32
ABCB1-204ENST00000476862 PLBD2Q8NHP8 589 aa23.32■■□□□ 1.32
ABCB1-204ENST00000476862 MRS2Q9HD23 443 aa23.32■■□□□ 1.32
ABCB1-204ENST00000476862 ELL2O00472 640 aaPredicted RBP23.31■■□□□ 1.32
ABCB1-204ENST00000476862 TCERG1O14776 1098 aaKnown RBP23.31■■□□□ 1.32
ABCB1-204ENST00000476862 NLRP10Q86W26 655 aa23.31■■□□□ 1.32
ABCB1-204ENST00000476862 JDP2Q8WYK2 163 aa23.31■■□□□ 1.32
ABCB1-204ENST00000476862 ANKRD36CQ5JPF3 1778 aa23.31■■□□□ 1.32
ABCB1-204ENST00000476862 PPEF1O14829 653 aaPredicted RBP23.3■■□□□ 1.32
ABCB1-204ENST00000476862 ZNF853P0CG23 659 aa23.3■■□□□ 1.32
ABCB1-204ENST00000476862 IARSP41252 1262 aaKnown RBP23.3■■□□□ 1.32
ABCB1-204ENST00000476862 SLC10A5Q5PT55 438 aa23.3■■□□□ 1.32
ABCB1-204ENST00000476862 OLFM4Q6UX06 510 aa23.3■■□□□ 1.32
ABCB1-204ENST00000476862 SH3TC1Q8TE82 1336 aa23.3■■□□□ 1.32
ABCB1-204ENST00000476862 DDNO94850 711 aaPredicted RBP23.29■■□□□ 1.32
ABCB1-204ENST00000476862 GOLGA2Q08379 1002 aa23.29■■□□□ 1.32
ABCB1-204ENST00000476862 RIC3Q7Z5B4 369 aa23.29■■□□□ 1.32
ABCB1-204ENST00000476862 IQCA1LA6NCM1 817 aa23.28■■□□□ 1.32
ABCB1-204ENST00000476862 DDX46Q7L014 1031 aaKnown RBP23.28■■□□□ 1.32
ABCB1-204ENST00000476862 PSMD1Q99460 953 aa23.28■■□□□ 1.32
ABCB1-204ENST00000476862 CCDC30Q5VVM6 783 aa23.27■■□□□ 1.32
ABCB1-204ENST00000476862 WDR90Q96KV7 1748 aa23.26■■□□□ 1.31
ABCB1-204ENST00000476862 HCLS1P14317 486 aaPredicted RBP23.26■■□□□ 1.31
ABCB1-204ENST00000476862 CCDC184Q52MB2 194 aa23.26■■□□□ 1.31
ABCB1-204ENST00000476862 BBOX1O75936 387 aa23.25■■□□□ 1.31
ABCB1-204ENST00000476862 DDX58O95786 925 aaKnown RBP23.25■■□□□ 1.31
ABCB1-204ENST00000476862 EIF6P56537 245 aaKnown RBP23.25■■□□□ 1.31
ABCB1-204ENST00000476862 ATP5J2-PTCD1G3V325 749 aa23.24■■□□□ 1.31
ABCB1-204ENST00000476862 LARGE2Q8N3Y3 721 aa23.24■■□□□ 1.31
ABCB1-204ENST00000476862 HSP90B1P14625 803 aaKnown RBP23.23■■□□□ 1.31
ABCB1-204ENST00000476862 CCDC27Q2M243 656 aa23.23■■□□□ 1.31
ABCB1-204ENST00000476862 C3orf67Q6ZVT6 689 aa23.23■■□□□ 1.31
ABCB1-204ENST00000476862 SUPT20HQ8NEM7 779 aa23.23■■□□□ 1.31
ABCB1-204ENST00000476862 POTECB2RU33 542 aa23.22■■□□□ 1.31
ABCB1-204ENST00000476862 C8orf58Q8NAV2 365 aa23.22■■□□□ 1.31
ABCB1-204ENST00000476862 ZNF428Q96B54 188 aa23.22■■□□□ 1.31
ABCB1-204ENST00000476862 STK31Q9BXU1 1019 aa23.22■■□□□ 1.31
ABCB1-204ENST00000476862 ATP6V0A2Q9Y487 856 aa23.22■■□□□ 1.31
ABCB1-204ENST00000476862 ABCC4O15439 1325 aa23.22■■□□□ 1.31
ABCB1-204ENST00000476862 FAM89AQ96GI7 184 aa23.21■■□□□ 1.31
ABCB1-204ENST00000476862 ISCA1Q9BUE6 129 aa23.21■■□□□ 1.31
ABCB1-204ENST00000476862 CHADLQ6NUI6 762 aa23.2■■□□□ 1.3
ABCB1-204ENST00000476862 WWC1Q8IX03 1113 aa23.2■■□□□ 1.3
ABCB1-204ENST00000476862 NIM1KQ8IY84 436 aa23.2■■□□□ 1.3
ABCB1-204ENST00000476862 PHAXQ9H814 394 aaKnown RBP23.2■■□□□ 1.3
ABCB1-204ENST00000476862 HACL1Q9UJ83 578 aa23.2■■□□□ 1.3
ABCB1-204ENST00000476862 SCN4AP35499 1836 aa23.19■■□□□ 1.3
ABCB1-204ENST00000476862 ZNF541Q9H0D2 1346 aa23.19■■□□□ 1.3
ABCB1-204ENST00000476862 FZD9O00144 591 aa23.19■■□□□ 1.3
ABCB1-204ENST00000476862 PPIP5K2O43314 1243 aa23.19■■□□□ 1.3
ABCB1-204ENST00000476862 GRAPQ13588 217 aa23.19■■□□□ 1.3
ABCB1-204ENST00000476862 RTL5Q5HYW3 569 aaPredicted RBP23.19■■□□□ 1.3
ABCB1-204ENST00000476862 DPP8Q6V1X1 898 aaPredicted RBP23.19■■□□□ 1.3
ABCB1-204ENST00000476862 TMC4Q7Z404 712 aa23.19■■□□□ 1.3
ABCB1-204ENST00000476862 SP8Q8IXZ3 490 aa23.19■■□□□ 1.3
ABCB1-204ENST00000476862 GRAPLQ8TC17 118 aaPredicted RBP23.19■■□□□ 1.3
ABCB1-204ENST00000476862 L3MBTL3Q96JM7 780 aaPredicted RBP23.19■■□□□ 1.3
ABCB1-204ENST00000476862 VPS33BQ9H267 617 aa23.19■■□□□ 1.3
ABCB1-204ENST00000476862 CLEC11AQ9Y240 323 aa23.19■■□□□ 1.3
ABCB1-204ENST00000476862 GJA3Q9Y6H8 435 aa23.19■■□□□ 1.3
ABCB1-204ENST00000476862 TRIM28Q13263 835 aaKnown RBP23.18■■□□□ 1.3
ABCB1-204ENST00000476862 EAPPQ56P03 285 aaPredicted RBP23.18■■□□□ 1.3
ABCB1-204ENST00000476862 GPC2Q8N158 579 aa23.18■■□□□ 1.3
ABCB1-204ENST00000476862 MPNDQ8N594 471 aa23.18■■□□□ 1.3
ABCB1-204ENST00000476862 TSR2Q969E8 191 aaKnown RBP23.18■■□□□ 1.3
ABCB1-204ENST00000476862 MYD88Q99836 296 aa23.18■■□□□ 1.3
ABCB1-204ENST00000476862 SALL2Q9Y467 1007 aaPredicted RBP23.18■■□□□ 1.3
ABCB1-204ENST00000476862 LAMB2P55268 1798 aa23.17■■□□□ 1.3
ABCB1-204ENST00000476862 LMOD1P29536 600 aaPredicted RBP23.17■■□□□ 1.3
ABCB1-204ENST00000476862 NCBP3Q53F19 620 aaKnown RBP23.17■■□□□ 1.3
ABCB1-204ENST00000476862 TAF1DQ9H5J8 278 aaPredicted RBP23.17■■□□□ 1.3
ABCB1-204ENST00000476862 CEP350Q5VT06 3117 aa23.17■■□□□ 1.3
ABCB1-204ENST00000476862 IL16Q14005 1332 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms