RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 EAF2Q96CJ1 260 aaPredicted RBP28.2■■■□□ 2.11
CCDC7-206ENST00000476558 ZNF330Q9Y3S2 320 aaPredicted RBP28.2■■■□□ 2.11
CCDC7-206ENST00000476558 RREB1Q92766 1687 aa28.2■■■□□ 2.11
CCDC7-206ENST00000476558 RILPL2Q969X0 211 aa28.2■■■□□ 2.1
CCDC7-206ENST00000476558 SIL1Q9H173 461 aa28.2■■■□□ 2.1
CCDC7-206ENST00000476558 AK9Q5TCS8 1911 aa28.19■■■□□ 2.1
CCDC7-206ENST00000476558 GLRX3O76003 335 aaKnown RBP28.19■■■□□ 2.1
CCDC7-206ENST00000476558 REC8O95072 547 aa28.19■■■□□ 2.1
CCDC7-206ENST00000476558 SNX21Q969T3 373 aa28.19■■■□□ 2.1
CCDC7-206ENST00000476558 ECHDC1Q9NTX5 307 aa28.19■■■□□ 2.1
CCDC7-206ENST00000476558 IFIT2P09913 472 aaKnown RBP28.18■■■□□ 2.1
CCDC7-206ENST00000476558 AACSQ86V21 672 aa28.18■■■□□ 2.1
CCDC7-206ENST00000476558 ESYT1Q9BSJ8 1104 aa28.18■■■□□ 2.1
CCDC7-206ENST00000476558 ANKRD36CQ5JPF3 1778 aa28.17■■■□□ 2.1
CCDC7-206ENST00000476558 LOC102724428A0A0B4J2F2 783 aa28.17■■■□□ 2.1
CCDC7-206ENST00000476558 SIK1P57059 783 aa28.17■■■□□ 2.1
CCDC7-206ENST00000476558 HLFQ16534 295 aa28.17■■■□□ 2.1
CCDC7-206ENST00000476558 INTS5Q6P9B9 1019 aaKnown RBP28.17■■■□□ 2.1
CCDC7-206ENST00000476558 ERVV-1B6SEH8 477 aa28.16■■■□□ 2.1
CCDC7-206ENST00000476558 PCCAP05165 728 aaPredicted RBP28.16■■■□□ 2.1
CCDC7-206ENST00000476558 USP21Q9UK80 565 aa28.16■■■□□ 2.1
CCDC7-206ENST00000476558 ZNF831Q5JPB2 1677 aa28.16■■■□□ 2.1
CCDC7-206ENST00000476558 THSD7AQ9UPZ6 1657 aa28.16■■■□□ 2.1
CCDC7-206ENST00000476558 NUP98P52948 1817 aa28.15■■■□□ 2.1
CCDC7-206ENST00000476558 KCNQ2O43526 872 aa28.15■■■□□ 2.1
CCDC7-206ENST00000476558 EIF5P55010 431 aaKnown RBP28.15■■■□□ 2.1
CCDC7-206ENST00000476558 RTL5Q5HYW3 569 aaPredicted RBP28.15■■■□□ 2.1
CCDC7-206ENST00000476558 GPATCH3Q96I76 525 aa28.15■■■□□ 2.1
CCDC7-206ENST00000476558 PLA2G12BQ9BX93 195 aa28.15■■■□□ 2.1
CCDC7-206ENST00000476558 PALLDQ8WX93 1383 aa28.14■■■□□ 2.1
CCDC7-206ENST00000476558 ATP6V1AP38606 617 aa28.14■■■□□ 2.1
CCDC7-206ENST00000476558 HSP90AB3PQ58FF7 597 aa28.14■■■□□ 2.1
CCDC7-206ENST00000476558 SMARCC1Q92922 1105 aaPredicted RBP28.14■■■□□ 2.1
CCDC7-206ENST00000476558 CNTROBQ8N137 903 aa28.13■■■□□ 2.09
CCDC7-206ENST00000476558 ZBTB38Q8NAP3 1195 aaPredicted RBP28.13■■■□□ 2.09
CCDC7-206ENST00000476558 CCDC87Q9NVE4 849 aa28.13■■■□□ 2.09
CCDC7-206ENST00000476558 ITPK1Q13572 414 aa28.13■■■□□ 2.09
CCDC7-206ENST00000476558 MAP4K4O95819 1239 aaPredicted RBP28.12■■■□□ 2.09
CCDC7-206ENST00000476558 NLRP10Q86W26 655 aa28.12■■■□□ 2.09
CCDC7-206ENST00000476558 CRKLP46109 303 aaKnown RBP28.11■■■□□ 2.09
CCDC7-206ENST00000476558 CCDC8Q9H0W5 538 aaPredicted RBP28.11■■■□□ 2.09
CCDC7-206ENST00000476558 MYH14Q7Z406 1995 aaKnown RBP28.11■■■□□ 2.09
CCDC7-206ENST00000476558 CDHR2Q9BYE9 1310 aa28.11■■■□□ 2.09
CCDC7-206ENST00000476558 HSPA1LP34931 641 aa28.11■■■□□ 2.09
CCDC7-206ENST00000476558 TFCP2Q12800 502 aa28.11■■■□□ 2.09
CCDC7-206ENST00000476558 ATG9AQ7Z3C6 839 aa28.11■■■□□ 2.09
CCDC7-206ENST00000476558 DZIP3Q86Y13 1208 aaKnown RBP28.11■■■□□ 2.09
CCDC7-206ENST00000476558 TLR7Q9NYK1 1049 aaKnown RBP28.11■■■□□ 2.09
CCDC7-206ENST00000476558 COL5A3P25940 1745 aaPredicted RBP28.1■■■□□ 2.09
CCDC7-206ENST00000476558 ARXQ96QS3 562 aa28.1■■■□□ 2.09
CCDC7-206ENST00000476558 ANTXR1Q9H6X2 564 aa28.1■■■□□ 2.09
CCDC7-206ENST00000476558 A0A0G2JS52 829 aa28.09■■■□□ 2.09
CCDC7-206ENST00000476558 TNNI3KQ59H18 835 aa28.09■■■□□ 2.09
CCDC7-206ENST00000476558 AEBP2Q6ZN18 517 aaPredicted RBP28.09■■■□□ 2.09
CCDC7-206ENST00000476558 FPGT-TNNI3KV9GXZ4 949 aa28.09■■■□□ 2.09
CCDC7-206ENST00000476558 EPB41L2O43491 1005 aaKnown RBP28.08■■■□□ 2.09
CCDC7-206ENST00000476558 CSF1RP07333 972 aa28.08■■■□□ 2.09
CCDC7-206ENST00000476558 HSCBQ8IWL3 235 aa28.08■■■□□ 2.09
CCDC7-206ENST00000476558 FAM89AQ96GI7 184 aa28.08■■■□□ 2.09
CCDC7-206ENST00000476558 ZNF34Q8IZ26 560 aa28.08■■■□□ 2.09
CCDC7-206ENST00000476558 TBC1D2BQ9UPU7 963 aa28.08■■■□□ 2.09
CCDC7-206ENST00000476558 IL25Q9H293 177 aa28.07■■■□□ 2.08
CCDC7-206ENST00000476558 CHMP3Q9Y3E7 222 aa28.07■■■□□ 2.08
CCDC7-206ENST00000476558 RABEP1Q15276 862 aa28.06■■■□□ 2.08
CCDC7-206ENST00000476558 CIAO1O76071 339 aa28.06■■■□□ 2.08
CCDC7-206ENST00000476558 GPTP24298 496 aa28.06■■■□□ 2.08
CCDC7-206ENST00000476558 EVI5LQ96CN4 794 aa28.06■■■□□ 2.08
CCDC7-206ENST00000476558 DBNLQ9UJU6 430 aaKnown RBP28.06■■■□□ 2.08
CCDC7-206ENST00000476558 IL15P40933 162 aaPredicted RBP28.05■■■□□ 2.08
CCDC7-206ENST00000476558 GPR108Q9NPR9 543 aa28.05■■■□□ 2.08
CCDC7-206ENST00000476558 EYA2O00167 538 aa28.04■■■□□ 2.08
CCDC7-206ENST00000476558 SGSM2O43147 1006 aa28.04■■■□□ 2.08
CCDC7-206ENST00000476558 CD2BP2O95400 341 aaKnown RBP28.04■■■□□ 2.08
CCDC7-206ENST00000476558 IL17RAQ96F46 866 aa28.04■■■□□ 2.08
CCDC7-206ENST00000476558 FBXO3Q9UK99 471 aa28.04■■■□□ 2.08
CCDC7-206ENST00000476558 SYNE4Q8N205 404 aa28.03■■■□□ 2.08
CCDC7-206ENST00000476558 GJD4Q96KN9 370 aaPredicted RBP28.03■■■□□ 2.08
CCDC7-206ENST00000476558 UBN2Q6ZU65 1347 aa28.03■■■□□ 2.08
CCDC7-206ENST00000476558 ATP5JP18859 108 aa28.02■■■□□ 2.08
CCDC7-206ENST00000476558 ZNF594Q96JF6 807 aaPredicted RBP28.02■■■□□ 2.08
CCDC7-206ENST00000476558 ONECUT3O60422 494 aaPredicted RBP28.02■■■□□ 2.08
CCDC7-206ENST00000476558 NHSQ6T4R5 1651 aa28.01■■■□□ 2.08
CCDC7-206ENST00000476558 MYH3P11055 1940 aa28.01■■■□□ 2.07
CCDC7-206ENST00000476558 CAMTA2O94983 1202 aa28.01■■■□□ 2.07
CCDC7-206ENST00000476558 LRRC24Q50LG9 513 aa28.01■■■□□ 2.07
CCDC7-206ENST00000476558 ANO2Q9NQ90 1003 aa28.01■■■□□ 2.07
CCDC7-206ENST00000476558 AFF2P51816 1311 aa28.01■■■□□ 2.07
CCDC7-206ENST00000476558 ATRNO75882 1429 aa28■■■□□ 2.07
CCDC7-206ENST00000476558 NBR1Q14596 966 aa28■■■□□ 2.07
CCDC7-206ENST00000476558 CCDC57Q2TAC2 916 aa28■■■□□ 2.07
CCDC7-206ENST00000476558 MEX3CQ5U5Q3 659 aaKnown RBP28■■■□□ 2.07
CCDC7-206ENST00000476558 PTF1AQ7RTS3 328 aa28■■■□□ 2.07
CCDC7-206ENST00000476558 SLKQ9H2G2 1235 aaPredicted RBP28■■■□□ 2.07
CCDC7-206ENST00000476558 TTLL11Q8NHH1 800 aa27.99■■■□□ 2.07
CCDC7-206ENST00000476558 BTAF1O14981 1849 aa27.99■■■□□ 2.07
CCDC7-206ENST00000476558 BOLA2Q9H3K6 86 aa27.99■■■□□ 2.07
CCDC7-206ENST00000476558 TRMT112Q9UI30 125 aaKnown RBP27.99■■■□□ 2.07
CCDC7-206ENST00000476558 ANAPC15P60006 121 aa27.98■■■□□ 2.07
CCDC7-206ENST00000476558 MYT1Q01538 1121 aa27.98■■■□□ 2.07
CCDC7-206ENST00000476558 LINC00116Q8NCU8 138 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms