RNA–Protein interactions for RNA: ENST00000476289.5

CHKB-207, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-207ENST00000476289 ELL2O00472 640 aaPredicted RBP41.78■■■■■ 4.28
CHKB-207ENST00000476289 CCDC93Q567U6 631 aa41.78■■■■■ 4.28
CHKB-207ENST00000476289 HSP90AB3PQ58FF7 597 aa41.78■■■■■ 4.28
CHKB-207ENST00000476289 C3orf67Q6ZVT6 689 aa41.78■■■■■ 4.28
CHKB-207ENST00000476289 UTP14AQ9BVJ6 771 aaKnown RBP41.78■■■■■ 4.28
CHKB-207ENST00000476289 ALDH1B1P30837 517 aa41.77■■■■■ 4.28
CHKB-207ENST00000476289 TCIRG1Q13488 830 aa41.77■■■■■ 4.28
CHKB-207ENST00000476289 NLRP10Q86W26 655 aa41.76■■■■■ 4.28
CHKB-207ENST00000476289 C8orf58Q8NAV2 365 aa41.76■■■■■ 4.28
CHKB-207ENST00000476289 CEP350Q5VT06 3117 aa41.75■■■■■ 4.27
CHKB-207ENST00000476289 CCDC27Q2M243 656 aa41.75■■■■■ 4.27
CHKB-207ENST00000476289 PLBD2Q8NHP8 589 aa41.74■■■■■ 4.27
CHKB-207ENST00000476289 RPGRQ92834 1020 aaKnown RBP41.74■■■■■ 4.27
CHKB-207ENST00000476289 HYPKQ9NX55 129 aa41.74■■■■■ 4.27
CHKB-207ENST00000476289 TOMM70O94826 608 aa41.73■■■■■ 4.27
CHKB-207ENST00000476289 HOXA10P31260 410 aaPredicted RBP41.73■■■■■ 4.27
CHKB-207ENST00000476289 WWC1Q8IX03 1113 aa41.73■■■■■ 4.27
CHKB-207ENST00000476289 RRAGCQ9HB90 399 aa41.73■■■■■ 4.27
CHKB-207ENST00000476289 GLTPD2A6NH11 291 aa41.72■■■■■ 4.27
CHKB-207ENST00000476289 ANKRD13DQ6ZTN6 518 aa41.71■■■■■ 4.27
CHKB-207ENST00000476289 TSR2Q969E8 191 aaKnown RBP41.71■■■■■ 4.27
CHKB-207ENST00000476289 RNF123Q5XPI4 1314 aa41.7■■■■■ 4.27
CHKB-207ENST00000476289 SLC10A5Q5PT55 438 aa41.7■■■■■ 4.27
CHKB-207ENST00000476289 LAMB2P55268 1798 aa41.7■■■■■ 4.27
CHKB-207ENST00000476289 SNED1Q8TER0 1413 aa41.69■■■■■ 4.27
CHKB-207ENST00000476289 SYNE4Q8N205 404 aa41.69■■■■■ 4.26
CHKB-207ENST00000476289 ZNF428Q96B54 188 aa41.69■■■■■ 4.26
CHKB-207ENST00000476289 FKBP4Q02790 459 aaKnown RBP eCLIP41.68■■■■■ 4.26
CHKB-207ENST00000476289 TSPYL6Q8N831 410 aa41.68■■■■■ 4.26
CHKB-207ENST00000476289 NLRP3Q96P20 1036 aa41.67■■■■■ 4.26
CHKB-207ENST00000476289 HSPA6P17066 643 aa41.66■■■■■ 4.26
CHKB-207ENST00000476289 SLC51AQ86UW1 340 aa41.66■■■■■ 4.26
CHKB-207ENST00000476289 RTKN2Q8IZC4 609 aa41.66■■■■■ 4.26
CHKB-207ENST00000476289 CRAMP1Q96RY5 1269 aa41.66■■■■■ 4.26
CHKB-207ENST00000476289 TRMT112Q9UI30 125 aaKnown RBP41.66■■■■■ 4.26
CHKB-207ENST00000476289 RBM17Q96I25 401 aaKnown RBP41.65■■■■■ 4.26
CHKB-207ENST00000476289 ISCA1Q9BUE6 129 aa41.65■■■■■ 4.26
CHKB-207ENST00000476289 PHAXQ9H814 394 aaKnown RBP41.65■■■■■ 4.26
CHKB-207ENST00000476289 HCLS1P14317 486 aaPredicted RBP41.64■■■■■ 4.26
CHKB-207ENST00000476289 NCBP3Q53F19 620 aaKnown RBP41.64■■■■■ 4.26
CHKB-207ENST00000476289 ZNF277Q9NRM2 450 aaPredicted RBP41.64■■■■■ 4.26
CHKB-207ENST00000476289 C16orf71Q8IYS4 520 aaPredicted RBP41.63■■■■■ 4.25
CHKB-207ENST00000476289 SH3TC1Q8TE82 1336 aa41.63■■■■■ 4.25
CHKB-207ENST00000476289 WDR90Q96KV7 1748 aa41.62■■■■■ 4.25
CHKB-207ENST00000476289 ATP5J2-PTCD1G3V325 749 aa41.62■■■■■ 4.25
CHKB-207ENST00000476289 RBM46Q8TBY0 533 aaKnown RBP41.62■■■■■ 4.25
CHKB-207ENST00000476289 IL16Q14005 1332 aa41.61■■■■■ 4.25
CHKB-207ENST00000476289 DDX60Q8IY21 1712 aaKnown RBP41.6■■■■■ 4.25
CHKB-207ENST00000476289 PPEF1O14829 653 aaPredicted RBP41.59■■■■■ 4.25
CHKB-207ENST00000476289 DPY19L2Q6NUT2 758 aa41.59■■■■■ 4.25
CHKB-207ENST00000476289 SALL2Q9Y467 1007 aaPredicted RBP41.59■■■■■ 4.25
CHKB-207ENST00000476289 GOLGA2Q08379 1002 aa41.58■■■■■ 4.25
CHKB-207ENST00000476289 CCDC30Q5VVM6 783 aa41.58■■■■■ 4.25
CHKB-207ENST00000476289 TCERG1O14776 1098 aaKnown RBP41.57■■■■■ 4.25
CHKB-207ENST00000476289 VEGFAP15692 232 aaPredicted RBP41.57■■■■■ 4.25
CHKB-207ENST00000476289 CC2D2BQ6DHV5 1058 aa41.57■■■■■ 4.25
CHKB-207ENST00000476289 ABCC4O15439 1325 aa41.57■■■■■ 4.25
CHKB-207ENST00000476289 POTECB2RU33 542 aa41.56■■■■■ 4.24
CHKB-207ENST00000476289 RIC3Q7Z5B4 369 aa41.56■■■■■ 4.24
CHKB-207ENST00000476289 PSMD1Q99460 953 aa41.56■■■■■ 4.24
CHKB-207ENST00000476289 FAM9BQ8IZU0 186 aa41.55■■■■■ 4.24
CHKB-207ENST00000476289 IARSP41252 1262 aaKnown RBP41.54■■■■■ 4.24
CHKB-207ENST00000476289 DDNO94850 711 aaPredicted RBP41.53■■■■■ 4.24
CHKB-207ENST00000476289 TRIM28Q13263 835 aaKnown RBP41.53■■■■■ 4.24
CHKB-207ENST00000476289 FAM89AQ96GI7 184 aa41.53■■■■■ 4.24
CHKB-207ENST00000476289 CHMP4AQ9BY43 222 aa41.52■■■■■ 4.24
CHKB-207ENST00000476289 FANCIQ9NVI1 1328 aa41.51■■■■■ 4.24
CHKB-207ENST00000476289 TWISTNBQ3B726 338 aaPredicted RBP41.51■■■■■ 4.24
CHKB-207ENST00000476289 TAF1P21675 1872 aa41.51■■■■■ 4.24
CHKB-207ENST00000476289 COL4A5P29400 1685 aa41.5■■■■■ 4.23
CHKB-207ENST00000476289 ZNF541Q9H0D2 1346 aa41.49■■■■■ 4.23
CHKB-207ENST00000476289 FSTL1Q12841 308 aa41.49■■■■■ 4.23
CHKB-207ENST00000476289 MYD88Q99836 296 aa41.49■■■■■ 4.23
CHKB-207ENST00000476289 ATP6V0A2Q9Y487 856 aa41.49■■■■■ 4.23
CHKB-207ENST00000476289 RTL5Q5HYW3 569 aaPredicted RBP41.48■■■■■ 4.23
CHKB-207ENST00000476289 WDR63Q8IWG1 891 aa41.48■■■■■ 4.23
CHKB-207ENST00000476289 GRIPAP1Q4V328 841 aa41.47■■■■■ 4.23
CHKB-207ENST00000476289 DDX46Q7L014 1031 aaKnown RBP41.45■■■■■ 4.23
CHKB-207ENST00000476289 DDX58O95786 925 aaKnown RBP41.44■■■■■ 4.22
CHKB-207ENST00000476289 SMC1BQ8NDV3 1235 aa41.44■■■■■ 4.22
CHKB-207ENST00000476289 STK31Q9BXU1 1019 aa41.44■■■■■ 4.22
CHKB-207ENST00000476289 BBOX1O75936 387 aa41.43■■■■■ 4.22
CHKB-207ENST00000476289 GRAPQ13588 217 aa41.43■■■■■ 4.22
CHKB-207ENST00000476289 GRAPLQ8TC17 118 aaPredicted RBP41.43■■■■■ 4.22
CHKB-207ENST00000476289 METTL22Q9BUU2 404 aaPredicted RBP41.43■■■■■ 4.22
CHKB-207ENST00000476289 FZD9O00144 591 aa41.42■■■■■ 4.22
CHKB-207ENST00000476289 APLP1P51693 650 aa41.42■■■■■ 4.22
CHKB-207ENST00000476289 SPINK5Q9NQ38 1064 aaPredicted RBP41.42■■■■■ 4.22
CHKB-207ENST00000476289 MAP3K2Q9Y2U5 619 aa41.42■■■■■ 4.22
CHKB-207ENST00000476289 COL4A1P02462 1669 aa41.42■■■■■ 4.22
CHKB-207ENST00000476289 IRS4O14654 1257 aaPredicted RBP41.41■■■■■ 4.22
CHKB-207ENST00000476289 SF3B3Q15393 1217 aaKnown RBP41.41■■■■■ 4.22
CHKB-207ENST00000476289 ZBTB38Q8NAP3 1195 aaPredicted RBP41.41■■■■■ 4.22
CHKB-207ENST00000476289 L3MBTL3Q96JM7 780 aaPredicted RBP41.41■■■■■ 4.22
CHKB-207ENST00000476289 G2E3Q7L622 706 aa41.4■■■■■ 4.22
CHKB-207ENST00000476289 SP8Q8IXZ3 490 aa41.39■■■■■ 4.22
CHKB-207ENST00000476289 CCDC191Q8NCU4 936 aa41.39■■■■■ 4.22
CHKB-207ENST00000476289 JDP2Q8WYK2 163 aa41.39■■■■■ 4.22
CHKB-207ENST00000476289 TMX4Q9H1E5 349 aaPredicted RBP41.39■■■■■ 4.22
CHKB-207ENST00000476289 LRRC37AA6NMS7 1700 aa41.38■■■■■ 4.22
Retrieved 100 of 20,778 RNA–protein pairs in 218.7 ms