RNA–Protein interactions for RNA: ENST00000476068.1

C1GALT1-207, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best)

Gene C1GALT1, Length 1,186 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-207ENST00000476068 SOX10P56693 466 aa17.23■□□□□ 0.35
C1GALT1-207ENST00000476068 LARGE2Q8N3Y3 721 aa17.23■□□□□ 0.35
C1GALT1-207ENST00000476068 KNSTRNQ9Y448 316 aa17.23■□□□□ 0.35
C1GALT1-207ENST00000476068 ABCC12Q96J65 1359 aa17.23■□□□□ 0.35
C1GALT1-207ENST00000476068 DIAPH1O60610 1272 aaKnown RBP17.22■□□□□ 0.35
C1GALT1-207ENST00000476068 ZIC5Q96T25 663 aa17.22■□□□□ 0.35
C1GALT1-207ENST00000476068 GLIS2Q9BZE0 524 aaPredicted RBP17.22■□□□□ 0.35
C1GALT1-207ENST00000476068 CEMIPQ8WUJ3 1361 aa17.21■□□□□ 0.35
C1GALT1-207ENST00000476068 BTBD11A6QL63 1104 aa17.21■□□□□ 0.35
C1GALT1-207ENST00000476068 CRY2Q49AN0 593 aa17.21■□□□□ 0.35
C1GALT1-207ENST00000476068 AMER1Q5JTC6 1135 aaPredicted RBP17.21■□□□□ 0.35
C1GALT1-207ENST00000476068 HHIPL1Q96JK4 782 aa17.21■□□□□ 0.35
C1GALT1-207ENST00000476068 GPRC5DQ9NZD1 345 aa17.21■□□□□ 0.35
C1GALT1-207ENST00000476068 GTF2E1P29083 439 aaPredicted RBP17.2■□□□□ 0.34
C1GALT1-207ENST00000476068 HLFQ16534 295 aa17.2■□□□□ 0.34
C1GALT1-207ENST00000476068 CC2D2BQ6DHV5 1058 aa17.2■□□□□ 0.34
C1GALT1-207ENST00000476068 GAS2L2Q8NHY3 880 aa17.2■□□□□ 0.34
C1GALT1-207ENST00000476068 ZNF408Q9H9D4 720 aa17.2■□□□□ 0.34
C1GALT1-207ENST00000476068 ADARB2Q9NS39 739 aaKnown RBP17.2■□□□□ 0.34
C1GALT1-207ENST00000476068 NUP98P52948 1817 aa17.19■□□□□ 0.34
C1GALT1-207ENST00000476068 NBPF26B4DH59 902 aa17.19■□□□□ 0.34
C1GALT1-207ENST00000476068 NBPF10Q6P3W6 841 aaKnown RBP17.19■□□□□ 0.34
C1GALT1-207ENST00000476068 NUTM1Q86Y26 1132 aa17.19■□□□□ 0.34
C1GALT1-207ENST00000476068 NIM1KQ8IY84 436 aa17.19■□□□□ 0.34
C1GALT1-207ENST00000476068 NBPF15Q8N660 670 aa17.19■□□□□ 0.34
C1GALT1-207ENST00000476068 COL3A1P02461 1466 aaPredicted RBP17.18■□□□□ 0.34
C1GALT1-207ENST00000476068 HSPA5P11021 654 aaKnown RBP17.18■□□□□ 0.34
C1GALT1-207ENST00000476068 RGL2O15211 777 aa17.17■□□□□ 0.34
C1GALT1-207ENST00000476068 RIC1Q4ADV7 1423 aa17.17■□□□□ 0.34
C1GALT1-207ENST00000476068 PRPF38BQ5VTL8 546 aaKnown RBP17.17■□□□□ 0.34
C1GALT1-207ENST00000476068 NPC1L1Q9UHC9 1359 aa17.16■□□□□ 0.34
C1GALT1-207ENST00000476068 LAMB4A4D0S4 1761 aa17.16■□□□□ 0.34
C1GALT1-207ENST00000476068 TCERG1O14776 1098 aaKnown RBP17.16■□□□□ 0.34
C1GALT1-207ENST00000476068 PPIP5K2O43314 1243 aa17.16■□□□□ 0.34
C1GALT1-207ENST00000476068 SNRPA1P09661 255 aaKnown RBP17.16■□□□□ 0.34
C1GALT1-207ENST00000476068 NOGQ13253 232 aa17.16■□□□□ 0.34
C1GALT1-207ENST00000476068 AOC3Q16853 763 aa17.16■□□□□ 0.34
C1GALT1-207ENST00000476068 RPGRQ92834 1020 aaKnown RBP17.16■□□□□ 0.34
C1GALT1-207ENST00000476068 PPEF1O14829 653 aaPredicted RBP17.15■□□□□ 0.34
C1GALT1-207ENST00000476068 U2SURPO15042 1029 aaKnown RBP17.15■□□□□ 0.34
C1GALT1-207ENST00000476068 GMPSP49915 693 aaPredicted RBP17.15■□□□□ 0.34
C1GALT1-207ENST00000476068 EIF4G2P78344 907 aaKnown RBP eCLIP17.15■□□□□ 0.34
C1GALT1-207ENST00000476068 PGAP2Q9UHJ9 254 aa17.15■□□□□ 0.34
C1GALT1-207ENST00000476068 AKAP11Q9UKA4 1901 aa17.15■□□□□ 0.34
C1GALT1-207ENST00000476068 HOXA10P31260 410 aaPredicted RBP17.14■□□□□ 0.33
C1GALT1-207ENST00000476068 CXCL9Q07325 125 aa17.14■□□□□ 0.33
C1GALT1-207ENST00000476068 GRIPAP1Q4V328 841 aa17.14■□□□□ 0.33
C1GALT1-207ENST00000476068 CLSPNQ9HAW4 1339 aa17.14■□□□□ 0.33
C1GALT1-207ENST00000476068 HIRAP54198 1017 aaPredicted RBP17.13■□□□□ 0.33
C1GALT1-207ENST00000476068 HUNKP57058 714 aa17.13■□□□□ 0.33
C1GALT1-207ENST00000476068 TRPM4Q8TD43 1214 aa17.13■□□□□ 0.33
C1GALT1-207ENST00000476068 NYXQ9GZU5 481 aa17.13■□□□□ 0.33
C1GALT1-207ENST00000476068 TIMELESSQ9UNS1 1208 aa17.13■□□□□ 0.33
C1GALT1-207ENST00000476068 KIF7Q2M1P5 1343 aa17.13■□□□□ 0.33
C1GALT1-207ENST00000476068 DLK2Q6UY11 383 aa17.12■□□□□ 0.33
C1GALT1-207ENST00000476068 PHACTR3Q96KR7 559 aa17.12■□□□□ 0.33
C1GALT1-207ENST00000476068 POLR2AP24928 1970 aaKnown RBP17.11■□□□□ 0.33
C1GALT1-207ENST00000476068 FAM155AB1AL88 458 aaPredicted RBP17.11■□□□□ 0.33
C1GALT1-207ENST00000476068 C3orf67Q6ZVT6 689 aa17.11■□□□□ 0.33
C1GALT1-207ENST00000476068 CDC37L1Q7L3B6 337 aa17.11■□□□□ 0.33
C1GALT1-207ENST00000476068 RBM17Q96I25 401 aaKnown RBP17.11■□□□□ 0.33
C1GALT1-207ENST00000476068 CRAMP1Q96RY5 1269 aa17.11■□□□□ 0.33
C1GALT1-207ENST00000476068 ZNRF3Q9ULT6 936 aa17.11■□□□□ 0.33
C1GALT1-207ENST00000476068 SHTN1A0MZ66 631 aa17.1■□□□□ 0.33
C1GALT1-207ENST00000476068 CC2D1BQ5T0F9 858 aaKnown RBP17.1■□□□□ 0.33
C1GALT1-207ENST00000476068 ZC3H15Q8WU90 426 aaKnown RBP17.1■□□□□ 0.33
C1GALT1-207ENST00000476068 SAGE1Q9NXZ1 904 aa17.1■□□□□ 0.33
C1GALT1-207ENST00000476068 UBN2Q6ZU65 1347 aa17.1■□□□□ 0.33
C1GALT1-207ENST00000476068 GPTP24298 496 aa17.09■□□□□ 0.33
C1GALT1-207ENST00000476068 MCM10Q7L590 875 aa17.09■□□□□ 0.33
C1GALT1-207ENST00000476068 USP48Q86UV5 1035 aa17.09■□□□□ 0.33
C1GALT1-207ENST00000476068 NGEFQ8N5V2 710 aa17.09■□□□□ 0.33
C1GALT1-207ENST00000476068 BCL2L13Q9BXK5 485 aa17.09■□□□□ 0.33
C1GALT1-207ENST00000476068 CDHR2Q9BYE9 1310 aa17.09■□□□□ 0.33
C1GALT1-207ENST00000476068 IBTKQ9P2D0 1353 aaPredicted RBP17.09■□□□□ 0.33
C1GALT1-207ENST00000476068 TRPA1O75762 1119 aa17.08■□□□□ 0.32
C1GALT1-207ENST00000476068 RAD17O75943 681 aa17.08■□□□□ 0.32
C1GALT1-207ENST00000476068 PRKAR2BP31323 418 aa17.08■□□□□ 0.32
C1GALT1-207ENST00000476068 KIF23Q02241 960 aaPredicted RBP17.08■□□□□ 0.32
C1GALT1-207ENST00000476068 SUSD4Q5VX71 490 aa17.08■□□□□ 0.32
C1GALT1-207ENST00000476068 RGMBQ6NW40 437 aa17.08■□□□□ 0.32
C1GALT1-207ENST00000476068 VPS33BQ9H267 617 aa17.08■□□□□ 0.32
C1GALT1-207ENST00000476068 RNF186Q9NXI6 227 aa17.08■□□□□ 0.32
C1GALT1-207ENST00000476068 LAMB2P55268 1798 aa17.07■□□□□ 0.32
C1GALT1-207ENST00000476068 MAP3K15Q6ZN16 1313 aa17.07■□□□□ 0.32
C1GALT1-207ENST00000476068 ATP6V0A2Q9Y487 856 aa17.07■□□□□ 0.32
C1GALT1-207ENST00000476068 ERVV-1B6SEH8 477 aa17.06■□□□□ 0.32
C1GALT1-207ENST00000476068 TTLL7Q6ZT98 887 aa17.06■□□□□ 0.32
C1GALT1-207ENST00000476068 CTU1Q7Z7A3 348 aaKnown RBP17.06■□□□□ 0.32
C1GALT1-207ENST00000476068 RTFDC1Q9BY42 306 aaPredicted RBP17.06■□□□□ 0.32
C1GALT1-207ENST00000476068 RSPH6AQ9H0K4 717 aa17.06■□□□□ 0.32
C1GALT1-207ENST00000476068 CNOT7Q9UIV1 285 aaKnown RBP17.06■□□□□ 0.32
C1GALT1-207ENST00000476068 NTSR2O95665 410 aa17.05■□□□□ 0.32
C1GALT1-207ENST00000476068 DCTN1Q14203 1278 aa17.05■□□□□ 0.32
C1GALT1-207ENST00000476068 MICALL2Q8IY33 904 aa17.05■□□□□ 0.32
C1GALT1-207ENST00000476068 SUPT20HQ8NEM7 779 aa17.05■□□□□ 0.32
C1GALT1-207ENST00000476068 TMX4Q9H1E5 349 aaPredicted RBP17.05■□□□□ 0.32
C1GALT1-207ENST00000476068 GBA2Q9HCG7 927 aaPredicted RBP17.05■□□□□ 0.32
C1GALT1-207ENST00000476068 ABCC4O15439 1325 aa17.04■□□□□ 0.32
C1GALT1-207ENST00000476068 TAF1P21675 1872 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms