RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 CXorf56Q9H5V9 222 aa12.42□□□□□ -0.42
ABCF1-205ENST00000475993 ABCC3O15438 1527 aa12.42□□□□□ -0.42
ABCF1-205ENST00000475993 ATP7AQ04656 1500 aa12.42□□□□□ -0.42
ABCF1-205ENST00000475993 KIF20BQ96Q89 1820 aa12.41□□□□□ -0.42
ABCF1-205ENST00000475993 NPHP1O15259 732 aa12.41□□□□□ -0.42
ABCF1-205ENST00000475993 E2F4Q16254 413 aa12.41□□□□□ -0.42
ABCF1-205ENST00000475993 DNAJC25Q9H1X3 360 aa12.41□□□□□ -0.42
ABCF1-205ENST00000475993 AOX1Q06278 1338 aa12.41□□□□□ -0.42
ABCF1-205ENST00000475993 RPGRIP1LQ68CZ1 1315 aa12.41□□□□□ -0.42
ABCF1-205ENST00000475993 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
ABCF1-205ENST00000475993 OS9Q13438 667 aaPredicted RBP12.41□□□□□ -0.42
ABCF1-205ENST00000475993 RASEFQ8IZ41 740 aa12.41□□□□□ -0.42
ABCF1-205ENST00000475993 HYPKQ9NX55 129 aa12.41□□□□□ -0.42
ABCF1-205ENST00000475993 TRMT1Q9NXH9 659 aaKnown RBP12.41□□□□□ -0.42
ABCF1-205ENST00000475993 CHMP3Q9Y3E7 222 aa12.41□□□□□ -0.42
ABCF1-205ENST00000475993 LMTK2Q8IWU2 1503 aa12.41□□□□□ -0.42
ABCF1-205ENST00000475993 CCDC83Q8IWF9 413 aa12.4□□□□□ -0.42
ABCF1-205ENST00000475993 VPS37CA5D8V6 355 aaPredicted RBP12.4□□□□□ -0.42
ABCF1-205ENST00000475993 CCDC69A6NI79 296 aa12.4□□□□□ -0.42
ABCF1-205ENST00000475993 IQCB1Q15051 598 aa12.4□□□□□ -0.42
ABCF1-205ENST00000475993 LRRN4CLQ8ND94 238 aa12.4□□□□□ -0.42
ABCF1-205ENST00000475993 ZNF526Q8TF50 670 aaPredicted RBP12.4□□□□□ -0.42
ABCF1-205ENST00000475993 ATG3Q9NT62 314 aa12.4□□□□□ -0.42
ABCF1-205ENST00000475993 FAM83GA6ND36 823 aa12.4□□□□□ -0.43
ABCF1-205ENST00000475993 SGSM2O43147 1006 aa12.4□□□□□ -0.43
ABCF1-205ENST00000475993 GOLGA6L1Q8N7Z2 621 aa12.4□□□□□ -0.43
ABCF1-205ENST00000475993 LSG1Q9H089 658 aaKnown RBP12.4□□□□□ -0.43
ABCF1-205ENST00000475993 NPHP3Q7Z494 1330 aa12.39□□□□□ -0.43
ABCF1-205ENST00000475993 ST3GAL1Q11201 340 aa12.39□□□□□ -0.43
ABCF1-205ENST00000475993 CCDC191Q8NCU4 936 aa12.39□□□□□ -0.43
ABCF1-205ENST00000475993 SMARCE1Q969G3 411 aa12.39□□□□□ -0.43
ABCF1-205ENST00000475993 DEF6Q9H4E7 631 aa12.39□□□□□ -0.43
ABCF1-205ENST00000475993 SH2B1Q9NRF2 756 aaPredicted RBP12.39□□□□□ -0.43
ABCF1-205ENST00000475993 PREX1Q8TCU6 1659 aa12.39□□□□□ -0.43
ABCF1-205ENST00000475993 ATP8B1O43520 1251 aa12.39□□□□□ -0.43
ABCF1-205ENST00000475993 IL13P35225 146 aa12.39□□□□□ -0.43
ABCF1-205ENST00000475993 ST5P78524 1137 aa12.39□□□□□ -0.43
ABCF1-205ENST00000475993 ARHGAP29Q52LW3 1261 aa12.39□□□□□ -0.43
ABCF1-205ENST00000475993 FILIP1Q7Z7B0 1213 aa12.39□□□□□ -0.43
ABCF1-205ENST00000475993 ZSCAN31Q96LW9 406 aaPredicted RBP12.39□□□□□ -0.43
ABCF1-205ENST00000475993 LRRFIP2Q9Y608 721 aaKnown RBP12.39□□□□□ -0.43
ABCF1-205ENST00000475993 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.38□□□□□ -0.437e-9■■■■■ 54.8
ABCF1-205ENST00000475993 POLR3GO15318 223 aaPredicted RBP12.38□□□□□ -0.43
ABCF1-205ENST00000475993 SNW1Q13573 536 aaKnown RBP12.38□□□□□ -0.43
ABCF1-205ENST00000475993 ZSCAN26Q16670 478 aa12.38□□□□□ -0.43
ABCF1-205ENST00000475993 TMCO3Q6UWJ1 677 aa12.38□□□□□ -0.43
ABCF1-205ENST00000475993 SCAND2PQ9GZW5 306 aaPredicted RBP12.38□□□□□ -0.43
ABCF1-205ENST00000475993 CLTCQ00610 1675 aaKnown RBP12.38□□□□□ -0.43
ABCF1-205ENST00000475993 GNAI2P04899 355 aa12.37□□□□□ -0.43
ABCF1-205ENST00000475993 SAFB2Q14151 953 aaKnown RBP eCLIP12.37□□□□□ -0.43
ABCF1-205ENST00000475993 DCTN1Q14203 1278 aa12.37□□□□□ -0.43
ABCF1-205ENST00000475993 VPS53Q5VIR6 699 aa12.37□□□□□ -0.43
ABCF1-205ENST00000475993 ARGLU1Q9NWB6 273 aaPredicted RBP12.37□□□□□ -0.43
ABCF1-205ENST00000475993 USP16Q9Y5T5 823 aa12.37□□□□□ -0.43
ABCF1-205ENST00000475993 YTHDC2Q9H6S0 1430 aaKnown RBP12.37□□□□□ -0.43
ABCF1-205ENST00000475993 ERCC6L2Q5T890 1561 aa12.37□□□□□ -0.43
ABCF1-205ENST00000475993 GOLGA6L19H0YKK7 550 aa12.37□□□□□ -0.43
ABCF1-205ENST00000475993 NR1I2O75469 434 aa12.37□□□□□ -0.43
ABCF1-205ENST00000475993 CASTP20810 708 aaKnown RBP12.37□□□□□ -0.43
ABCF1-205ENST00000475993 FBLN1P23142 703 aa12.37□□□□□ -0.43
ABCF1-205ENST00000475993 GPS2Q13227 327 aa12.37□□□□□ -0.43
ABCF1-205ENST00000475993 TSGA10IPQ3SY00 556 aa12.37□□□□□ -0.43
ABCF1-205ENST00000475993 CDC37L1Q7L3B6 337 aa12.37□□□□□ -0.43
ABCF1-205ENST00000475993 ORC3Q9UBD5 711 aaPredicted RBP12.37□□□□□ -0.43
ABCF1-205ENST00000475993 ADGRL3Q9HAR2 1447 aa12.37□□□□□ -0.43
ABCF1-205ENST00000475993 MAP2P11137 1827 aaKnown RBP12.37□□□□□ -0.43
ABCF1-205ENST00000475993 A0A1B0GUL7 405 aa12.36□□□□□ -0.43
ABCF1-205ENST00000475993 DTNBO60941 627 aa12.36□□□□□ -0.43
ABCF1-205ENST00000475993 CPA1P15085 419 aa12.36□□□□□ -0.43
ABCF1-205ENST00000475993 ATP2B1P20020 1258 aa12.36□□□□□ -0.43
ABCF1-205ENST00000475993 CCT4P50991 539 aaKnown RBP12.36□□□□□ -0.43
ABCF1-205ENST00000475993 E4F1Q66K89 784 aaPredicted RBP12.36□□□□□ -0.43
ABCF1-205ENST00000475993 GOLGA6L4A6NEF3 574 aa12.36□□□□□ -0.43
ABCF1-205ENST00000475993 TUBB4AP04350 444 aa12.36□□□□□ -0.43
ABCF1-205ENST00000475993 LARP1BQ659C4 914 aaKnown RBP12.36□□□□□ -0.43
ABCF1-205ENST00000475993 FAM173BQ6P4H8 233 aa12.36□□□□□ -0.43
ABCF1-205ENST00000475993 HDGFL2Q7Z4V5 671 aaPredicted RBP12.36□□□□□ -0.43
ABCF1-205ENST00000475993 CCDC91Q7Z6B0 441 aa12.36□□□□□ -0.43
ABCF1-205ENST00000475993 SPATA32Q96LK8 384 aa12.36□□□□□ -0.43
ABCF1-205ENST00000475993 CWC15Q9P013 229 aaKnown RBP12.36□□□□□ -0.43
ABCF1-205ENST00000475993 CHL1O00533 1208 aa12.36□□□□□ -0.43
ABCF1-205ENST00000475993 GSDMDP57764 484 aa12.36□□□□□ -0.43
ABCF1-205ENST00000475993 TTC31Q49AM3 519 aaPredicted RBP12.36□□□□□ -0.43
ABCF1-205ENST00000475993 SRLQ86TD4 932 aa12.36□□□□□ -0.43
ABCF1-205ENST00000475993 LEO1Q8WVC0 666 aaPredicted RBP12.36□□□□□ -0.43
ABCF1-205ENST00000475993 PPP1R13BQ96KQ4 1090 aa12.36□□□□□ -0.43
ABCF1-205ENST00000475993 PNMA6EA0A0J9YXQ4 647 aa12.35□□□□□ -0.43
ABCF1-205ENST00000475993 CCDC189A1A4V9 331 aa12.35□□□□□ -0.43
ABCF1-205ENST00000475993 KIF1CO43896 1103 aaKnown RBP12.35□□□□□ -0.43
ABCF1-205ENST00000475993 FERMT3Q86UX7 667 aa12.35□□□□□ -0.43
ABCF1-205ENST00000475993 GOLGA5Q8TBA6 731 aa12.35□□□□□ -0.43
ABCF1-205ENST00000475993 OSBPL5Q9H0X9 879 aaPredicted RBP12.35□□□□□ -0.43
ABCF1-205ENST00000475993 PDRG1Q9NUG6 133 aa12.35□□□□□ -0.43
ABCF1-205ENST00000475993 ZBTB12Q9Y330 459 aaPredicted RBP12.35□□□□□ -0.43
ABCF1-205ENST00000475993 PSDA5PKW4 1024 aaPredicted RBP12.35□□□□□ -0.43
ABCF1-205ENST00000475993 ATP8B2P98198 1209 aa12.35□□□□□ -0.43
ABCF1-205ENST00000475993 ME3Q16798 604 aa12.35□□□□□ -0.43
ABCF1-205ENST00000475993 C11orf57Q6ZUT1 292 aaPredicted RBP12.35□□□□□ -0.43
ABCF1-205ENST00000475993 PACS2Q86VP3 889 aa12.35□□□□□ -0.43
ABCF1-205ENST00000475993 IQUBQ8NA54 791 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms