RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 HLFQ16534 295 aa17.01■□□□□ 0.31
TRAF4-210ENST00000475329 BACH2Q9BYV9 841 aa17.01■□□□□ 0.31
TRAF4-210ENST00000475329 TNS1Q9HBL0 1735 aaKnown RBP17.01■□□□□ 0.31
TRAF4-210ENST00000475329 SMARCA5O60264 1052 aaPredicted RBP17■□□□□ 0.31
TRAF4-210ENST00000475329 RABL6Q3YEC7 729 aaPredicted RBP17■□□□□ 0.31
TRAF4-210ENST00000475329 JARID2Q92833 1246 aaPredicted RBP17■□□□□ 0.31
TRAF4-210ENST00000475329 RGPD3A6NKT7 1758 aaPredicted RBP17■□□□□ 0.31
TRAF4-210ENST00000475329 RGPD4Q7Z3J3 1758 aa17■□□□□ 0.31
TRAF4-210ENST00000475329 CASZ1Q86V15 1759 aa17■□□□□ 0.31
TRAF4-210ENST00000475329 CAMTA2O94983 1202 aa16.99■□□□□ 0.31
TRAF4-210ENST00000475329 PCCAP05165 728 aaPredicted RBP16.99■□□□□ 0.31
TRAF4-210ENST00000475329 KCNQ4P56696 695 aa16.99■□□□□ 0.31
TRAF4-210ENST00000475329 EPHA10Q5JZY3 1008 aa16.99■□□□□ 0.31
TRAF4-210ENST00000475329 NLRP10Q86W26 655 aa16.99■□□□□ 0.31
TRAF4-210ENST00000475329 NOP58Q9Y2X3 529 aaKnown RBP16.99■□□□□ 0.31
TRAF4-210ENST00000475329 AK9Q5TCS8 1911 aa16.99■□□□□ 0.31
TRAF4-210ENST00000475329 DDX60Q8IY21 1712 aaKnown RBP16.99■□□□□ 0.31
TRAF4-210ENST00000475329 GPTP24298 496 aa16.98■□□□□ 0.31
TRAF4-210ENST00000475329 OS9Q13438 667 aaPredicted RBP16.98■□□□□ 0.31
TRAF4-210ENST00000475329 C8orf34Q49A92 452 aa16.98■□□□□ 0.31
TRAF4-210ENST00000475329 ERC1Q8IUD2 1116 aa16.98■□□□□ 0.31
TRAF4-210ENST00000475329 KIF1BPQ96EK5 621 aa16.98■□□□□ 0.31
TRAF4-210ENST00000475329 ZNF652Q9Y2D9 606 aa16.98■□□□□ 0.31
TRAF4-210ENST00000475329 COL24A1Q17RW2 1714 aa16.98■□□□□ 0.31
TRAF4-210ENST00000475329 CDHR2Q9BYE9 1310 aa16.97■□□□□ 0.31
TRAF4-210ENST00000475329 RGL2O15211 777 aa16.97■□□□□ 0.31
TRAF4-210ENST00000475329 RPS6KA4O75676 772 aa16.97■□□□□ 0.31
TRAF4-210ENST00000475329 TRIM37O94972 964 aa16.97■□□□□ 0.31
TRAF4-210ENST00000475329 FOXO4P98177 505 aa16.97■□□□□ 0.31
TRAF4-210ENST00000475329 PLEKHM2Q8IWE5 1019 aa16.97■□□□□ 0.31
TRAF4-210ENST00000475329 ZNF34Q8IZ26 560 aa16.97■□□□□ 0.31
TRAF4-210ENST00000475329 ZBTB38Q8NAP3 1195 aaPredicted RBP16.97■□□□□ 0.31
TRAF4-210ENST00000475329 RBM19Q9Y4C8 960 aaKnown RBP16.97■□□□□ 0.31
TRAF4-210ENST00000475329 GNPATO15228 680 aa16.96■□□□□ 0.31
TRAF4-210ENST00000475329 RTL5Q5HYW3 569 aaPredicted RBP16.96■□□□□ 0.31
TRAF4-210ENST00000475329 RHPN1Q8TCX5 695 aa16.96■□□□□ 0.31
TRAF4-210ENST00000475329 PARP10Q53GL7 1025 aa16.95■□□□□ 0.3
TRAF4-210ENST00000475329 BMP2KLQ5H9B9 411 aa16.95■□□□□ 0.3
TRAF4-210ENST00000475329 SLC27A3Q5K4L6 730 aa16.95■□□□□ 0.3
TRAF4-210ENST00000475329 LMBR1LQ6UX01 489 aa16.95■□□□□ 0.3
TRAF4-210ENST00000475329 C16orf71Q8IYS4 520 aaPredicted RBP16.95■□□□□ 0.3
TRAF4-210ENST00000475329 PLA2G12BQ9BX93 195 aa16.95■□□□□ 0.3
TRAF4-210ENST00000475329 BCL11AQ9H165 835 aa16.95■□□□□ 0.3
TRAF4-210ENST00000475329 PA2G4Q9UQ80 394 aaKnown RBP16.95■□□□□ 0.3
TRAF4-210ENST00000475329 UBN2Q6ZU65 1347 aa16.95■□□□□ 0.3
TRAF4-210ENST00000475329 HMGB2P26583 209 aaKnown RBP16.94■□□□□ 0.3
TRAF4-210ENST00000475329 G3BP1Q13283 466 aaKnown RBP eCLIP16.94■□□□□ 0.3
TRAF4-210ENST00000475329 OTUD7AQ8TE49 926 aaPredicted RBP16.94■□□□□ 0.3
TRAF4-210ENST00000475329 COPRSQ9NQ92 184 aa16.94■□□□□ 0.3
TRAF4-210ENST00000475329 RTCBQ9Y3I0 505 aaKnown RBP16.94■□□□□ 0.3
TRAF4-210ENST00000475329 RFX5P48382 616 aaPredicted RBP16.93■□□□□ 0.3
TRAF4-210ENST00000475329 TTC22Q5TAA0 569 aa16.93■□□□□ 0.3
TRAF4-210ENST00000475329 CLEC4GQ6UXB4 293 aa16.93■□□□□ 0.3
TRAF4-210ENST00000475329 FAM89AQ96GI7 184 aa16.93■□□□□ 0.3
TRAF4-210ENST00000475329 AK7Q96M32 723 aa16.93■□□□□ 0.3
TRAF4-210ENST00000475329 IL1RAPL2Q9NP60 686 aa16.93■□□□□ 0.3
TRAF4-210ENST00000475329 TRMT112Q9UI30 125 aaKnown RBP16.93■□□□□ 0.3
TRAF4-210ENST00000475329 CHMP3Q9Y3E7 222 aa16.93■□□□□ 0.3
TRAF4-210ENST00000475329 SALL3Q9BXA9 1300 aa16.93■□□□□ 0.3
TRAF4-210ENST00000475329 SPEF2Q9C093 1822 aa16.92■□□□□ 0.3
TRAF4-210ENST00000475329 OSBPL3Q9H4L5 887 aa16.92■□□□□ 0.3
TRAF4-210ENST00000475329 LRRC4BQ9NT99 713 aa16.92■□□□□ 0.3
TRAF4-210ENST00000475329 NARFQ9UHQ1 456 aa16.92■□□□□ 0.3
TRAF4-210ENST00000475329 AOX1Q06278 1338 aa16.92■□□□□ 0.3
TRAF4-210ENST00000475329 MX1P20591 662 aa16.91■□□□□ 0.3
TRAF4-210ENST00000475329 PDE1AP54750 535 aa16.91■□□□□ 0.3
TRAF4-210ENST00000475329 PTPN12Q05209 780 aaKnown RBP16.91■□□□□ 0.3
TRAF4-210ENST00000475329 UTP14AQ9BVJ6 771 aaKnown RBP16.91■□□□□ 0.3
TRAF4-210ENST00000475329 SIL1Q9H173 461 aa16.91■□□□□ 0.3
TRAF4-210ENST00000475329 NIP7Q9Y221 180 aaKnown RBP eCLIP16.91■□□□□ 0.3
TRAF4-210ENST00000475329 IRS4O14654 1257 aaPredicted RBP16.9■□□□□ 0.3
TRAF4-210ENST00000475329 CLASRPQ8N2M8 674 aaKnown RBP16.9■□□□□ 0.3
TRAF4-210ENST00000475329 KLHDC4Q8TBB5 520 aa16.9■□□□□ 0.3
TRAF4-210ENST00000475329 UPF1Q92900 1129 aaKnown RBP eCLIP16.9■□□□□ 0.3
TRAF4-210ENST00000475329 STAP2Q9UGK3 403 aa16.9■□□□□ 0.3
TRAF4-210ENST00000475329 SH3TC1Q8TE82 1336 aa16.9■□□□□ 0.3
TRAF4-210ENST00000475329 LRP5O75197 1615 aa16.89■□□□□ 0.29
TRAF4-210ENST00000475329 PDE8AO60658 829 aa16.89■□□□□ 0.29
TRAF4-210ENST00000475329 ZPR1O75312 459 aa16.89■□□□□ 0.29
TRAF4-210ENST00000475329 HSP90B1P14625 803 aaKnown RBP16.89■□□□□ 0.29
TRAF4-210ENST00000475329 GSPT1P15170 499 aaKnown RBP16.89■□□□□ 0.29
TRAF4-210ENST00000475329 ADRA2BP18089 450 aa16.89■□□□□ 0.29
TRAF4-210ENST00000475329 CTSWP56202 376 aa16.89■□□□□ 0.29
TRAF4-210ENST00000475329 SUSD4Q5VX71 490 aa16.89■□□□□ 0.29
TRAF4-210ENST00000475329 PLSCR1O15162 318 aa16.88■□□□□ 0.29
TRAF4-210ENST00000475329 SASH1O94885 1247 aa16.88■□□□□ 0.29
TRAF4-210ENST00000475329 NTSR2O95665 410 aa16.88■□□□□ 0.29
TRAF4-210ENST00000475329 CSF1RP07333 972 aa16.88■□□□□ 0.29
TRAF4-210ENST00000475329 TXNRD1Q16881 649 aa16.88■□□□□ 0.29
TRAF4-210ENST00000475329 CCDC57Q2TAC2 916 aa16.88■□□□□ 0.29
TRAF4-210ENST00000475329 SYNE4Q8N205 404 aa16.88■□□□□ 0.29
TRAF4-210ENST00000475329 TRAPPC3LQ5T215 181 aa16.87■□□□□ 0.29
TRAF4-210ENST00000475329 USPL1Q5W0Q7 1092 aa16.87■□□□□ 0.29
TRAF4-210ENST00000475329 NUTM1Q86Y26 1132 aa16.87■□□□□ 0.29
TRAF4-210ENST00000475329 ARHGEF1Q92888 912 aaKnown RBP16.87■□□□□ 0.29
TRAF4-210ENST00000475329 GPATCH3Q96I76 525 aa16.87■□□□□ 0.29
TRAF4-210ENST00000475329 BCL2L12Q9HB09 334 aa16.87■□□□□ 0.29
TRAF4-210ENST00000475329 SRP68Q9UHB9 627 aaKnown RBP16.87■□□□□ 0.29
TRAF4-210ENST00000475329 USP42Q9H9J4 1324 aaKnown RBP16.87■□□□□ 0.29
TRAF4-210ENST00000475329 FAM177BA6PVY3 158 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms