RNA–Protein interactions for RNA: ENST00000474658.6

APTX-219, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-219ENST00000474658 ERFEQ4G0M1 354 aa12.17□□□□□ -0.46
APTX-219ENST00000474658 KSR2Q6VAB6 950 aa12.17□□□□□ -0.46
APTX-219ENST00000474658 PPP1R42Q7Z4L9 355 aa12.17□□□□□ -0.46
APTX-219ENST00000474658 NUTM1Q86Y26 1132 aa12.17□□□□□ -0.46
APTX-219ENST00000474658 C2CD5Q86YS7 1000 aa12.17□□□□□ -0.46
APTX-219ENST00000474658 PI4KAP1Q8N8J0 262 aa12.17□□□□□ -0.46
APTX-219ENST00000474658 ZNF428Q96B54 188 aa12.17□□□□□ -0.46
APTX-219ENST00000474658 MYD88Q99836 296 aa12.17□□□□□ -0.46
APTX-219ENST00000474658 ISCA1Q9BUE6 129 aa12.17□□□□□ -0.46
APTX-219ENST00000474658 MAP3K2Q9Y2U5 619 aa12.17□□□□□ -0.46
APTX-219ENST00000474658 GOLGB1Q14789 3259 aaKnown RBP12.17□□□□□ -0.46
APTX-219ENST00000474658 ZBED9Q6R2W3 1325 aa12.16□□□□□ -0.46
APTX-219ENST00000474658 H0YIN7 160 aa12.16□□□□□ -0.46
APTX-219ENST00000474658 YBX3P16989 372 aaKnown RBP eCLIP12.16□□□□□ -0.46
APTX-219ENST00000474658 PDE6BP35913 854 aa12.16□□□□□ -0.46
APTX-219ENST00000474658 FKBP5Q13451 457 aaPredicted RBP12.16□□□□□ -0.46
APTX-219ENST00000474658 METTL22Q9BUU2 404 aaPredicted RBP12.16□□□□□ -0.46
APTX-219ENST00000474658 UTP14AQ9BVJ6 771 aaKnown RBP12.16□□□□□ -0.46
APTX-219ENST00000474658 PIM2Q9P1W9 311 aa12.16□□□□□ -0.46
APTX-219ENST00000474658 ADCY9O60503 1353 aa12.16□□□□□ -0.46
APTX-219ENST00000474658 IBTKQ9P2D0 1353 aaPredicted RBP12.16□□□□□ -0.46
APTX-219ENST00000474658 ABCB7O75027 752 aa12.15□□□□□ -0.46
APTX-219ENST00000474658 TRIM28Q13263 835 aaKnown RBP12.15□□□□□ -0.46
APTX-219ENST00000474658 MRPL50Q8N5N7 158 aaKnown RBP12.15□□□□□ -0.46
APTX-219ENST00000474658 SSH1Q8WYL5 1049 aa12.15□□□□□ -0.46
APTX-219ENST00000474658 TRMT112Q9UI30 125 aaKnown RBP12.15□□□□□ -0.46
APTX-219ENST00000474658 BCS1LQ9Y276 419 aa12.15□□□□□ -0.46
APTX-219ENST00000474658 CACNA1FO60840 1977 aa12.15□□□□□ -0.46
APTX-219ENST00000474658 ABCC12Q96J65 1359 aa12.15□□□□□ -0.46
APTX-219ENST00000474658 CT47B1P0C2W7 299 aaPredicted RBP12.14□□□□□ -0.47
APTX-219ENST00000474658 SYNE4Q8N205 404 aa12.14□□□□□ -0.47
APTX-219ENST00000474658 ZNF622Q969S3 477 aaKnown RBP eCLIP12.14□□□□□ -0.47
APTX-219ENST00000474658 PDZRN3Q9UPQ7 1066 aa12.14□□□□□ -0.47
APTX-219ENST00000474658 BRCA1P38398 1863 aaKnown RBP12.13□□□□□ -0.47
APTX-219ENST00000474658 KLRG2A4D1S0 409 aaPredicted RBP12.13□□□□□ -0.47
APTX-219ENST00000474658 IGKV5-2P06315 115 aa12.13□□□□□ -0.47
APTX-219ENST00000474658 SRGNP10124 158 aa12.13□□□□□ -0.47
APTX-219ENST00000474658 ALDH1L2Q3SY69 923 aa12.13□□□□□ -0.47
APTX-219ENST00000474658 DALRD3Q5D0E6 543 aaKnown RBP12.13□□□□□ -0.47
APTX-219ENST00000474658 SLC10A5Q5PT55 438 aa12.13□□□□□ -0.47
APTX-219ENST00000474658 SAMD1Q6SPF0 538 aaPredicted RBP12.13□□□□□ -0.47
APTX-219ENST00000474658 DNAAF4Q8WXU2 420 aa12.13□□□□□ -0.47
APTX-219ENST00000474658 BCL2L13Q9BXK5 485 aa12.13□□□□□ -0.47
APTX-219ENST00000474658 COL11A2P13942 1736 aaPredicted RBP12.13□□□□□ -0.47
APTX-219ENST00000474658 TNRC6CQ9HCJ0 1690 aaKnown RBP12.13□□□□□ -0.47
APTX-219ENST00000474658 DLEC1Q9Y238 1755 aa12.13□□□□□ -0.47
APTX-219ENST00000474658 SH3TC1Q8TE82 1336 aa12.12□□□□□ -0.47
APTX-219ENST00000474658 UTRNP46939 3433 aa12.12□□□□□ -0.47
APTX-219ENST00000474658 F6X3S4 739 aa12.12□□□□□ -0.47
APTX-219ENST00000474658 GRIN3BO60391 1043 aa12.12□□□□□ -0.47
APTX-219ENST00000474658 HCLS1P14317 486 aaPredicted RBP12.12□□□□□ -0.47
APTX-219ENST00000474658 NEXNQ0ZGT2 675 aa12.12□□□□□ -0.47
APTX-219ENST00000474658 RTL5Q5HYW3 569 aaPredicted RBP12.12□□□□□ -0.47
APTX-219ENST00000474658 C3orf67Q6ZVT6 689 aa12.12□□□□□ -0.47
APTX-219ENST00000474658 CCDC191Q8NCU4 936 aa12.12□□□□□ -0.47
APTX-219ENST00000474658 FAM89AQ96GI7 184 aa12.12□□□□□ -0.47
APTX-219ENST00000474658 MASTLQ96GX5 879 aa12.12□□□□□ -0.47
APTX-219ENST00000474658 SMC4Q9NTJ3 1288 aa12.12□□□□□ -0.47
APTX-219ENST00000474658 CWC25Q9NXE8 425 aaPredicted RBP12.12□□□□□ -0.47
APTX-219ENST00000474658 RNF123Q5XPI4 1314 aa12.11□□□□□ -0.47
APTX-219ENST00000474658 RIC1Q4ADV7 1423 aa12.11□□□□□ -0.47
APTX-219ENST00000474658 NEURL1BA8MQ27 555 aa12.11□□□□□ -0.47
APTX-219ENST00000474658 RARSP54136 660 aaKnown RBP12.11□□□□□ -0.47
APTX-219ENST00000474658 CWF19L2Q2TBE0 894 aaKnown RBP12.11□□□□□ -0.47
APTX-219ENST00000474658 STYK1Q6J9G0 422 aa12.11□□□□□ -0.47
APTX-219ENST00000474658 TTLL6Q8N841 843 aa12.11□□□□□ -0.47
APTX-219ENST00000474658 JARID2Q92833 1246 aaPredicted RBP12.11□□□□□ -0.47
APTX-219ENST00000474658 NLRP3Q96P20 1036 aa12.11□□□□□ -0.47
APTX-219ENST00000474658 NPR1P16066 1061 aa12.1□□□□□ -0.47
APTX-219ENST00000474658 CRY2Q49AN0 593 aa12.1□□□□□ -0.47
APTX-219ENST00000474658 ZBTB38Q8NAP3 1195 aaPredicted RBP12.1□□□□□ -0.47
APTX-219ENST00000474658 LINS1Q8NG48 757 aa12.1□□□□□ -0.47
APTX-219ENST00000474658 CNKSR1Q969H4 720 aa12.1□□□□□ -0.47
APTX-219ENST00000474658 ZNF219Q9P2Y4 722 aaPredicted RBP12.1□□□□□ -0.47
APTX-219ENST00000474658 IRS4O14654 1257 aaPredicted RBP12.09□□□□□ -0.47
APTX-219ENST00000474658 PCCAP05165 728 aaPredicted RBP12.09□□□□□ -0.47
APTX-219ENST00000474658 BEND3Q5T5X7 828 aa12.09□□□□□ -0.47
APTX-219ENST00000474658 SLC4A10Q6U841 1118 aa12.09□□□□□ -0.47
APTX-219ENST00000474658 RPGRQ92834 1020 aaKnown RBP12.09□□□□□ -0.47
APTX-219ENST00000474658 PTPRCP08575 1304 aa12.09□□□□□ -0.47
APTX-219ENST00000474658 DDX60Q8IY21 1712 aaKnown RBP12.08□□□□□ -0.47
APTX-219ENST00000474658 HOXA10P31260 410 aaPredicted RBP12.08□□□□□ -0.48
APTX-219ENST00000474658 GCKRQ14397 625 aa12.08□□□□□ -0.48
APTX-219ENST00000474658 PRPF40BQ6NWY9 871 aaKnown RBP12.08□□□□□ -0.48
APTX-219ENST00000474658 ARHGAP27Q6ZUM4 889 aa12.08□□□□□ -0.48
APTX-219ENST00000474658 NOB1Q9ULX3 412 aaKnown RBP12.08□□□□□ -0.48
APTX-219ENST00000474658 ARFGEF1Q9Y6D6 1849 aa12.08□□□□□ -0.48
APTX-219ENST00000474658 CACNA1SQ13698 1873 aa12.08□□□□□ -0.48
APTX-219ENST00000474658 LAMB2P55268 1798 aa12.07□□□□□ -0.48
APTX-219ENST00000474658 SLX4Q8IY92 1834 aa12.07□□□□□ -0.48
APTX-219ENST00000474658 H7C1W4 665 aa12.07□□□□□ -0.48
APTX-219ENST00000474658 C21orf2O43822 256 aa12.07□□□□□ -0.48
APTX-219ENST00000474658 BCAR3O75815 825 aa12.07□□□□□ -0.48
APTX-219ENST00000474658 ALDH1B1P30837 517 aa12.07□□□□□ -0.48
APTX-219ENST00000474658 BRPF1P55201 1214 aaPredicted RBP12.07□□□□□ -0.48
APTX-219ENST00000474658 RBM17Q96I25 401 aaKnown RBP12.07□□□□□ -0.48
APTX-219ENST00000474658 SF3B3Q15393 1217 aaKnown RBP12.06□□□□□ -0.48
APTX-219ENST00000474658 YTHDC1Q96MU7 727 aaKnown RBP12.06□□□□□ -0.48
APTX-219ENST00000474658 CRAMP1Q96RY5 1269 aa12.06□□□□□ -0.48
APTX-219ENST00000474658 SRCIN1Q9C0H9 1055 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms