RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 ZSCAN31Q96LW9 406 aaPredicted RBP16.68■□□□□ 0.26
ABCF3-210ENST00000473311 RGPD2P0DJD1 1756 aa16.67■□□□□ 0.26
ABCF3-210ENST00000473311 ZKSCAN1P17029 563 aaPredicted RBP16.67■□□□□ 0.26
ABCF3-210ENST00000473311 PROSER3Q2NL68 480 aa16.67■□□□□ 0.26
ABCF3-210ENST00000473311 ZSWIM6Q9HCJ5 1215 aa16.67■□□□□ 0.26
ABCF3-210ENST00000473311 SH2B1Q9NRF2 756 aaPredicted RBP16.67■□□□□ 0.26
ABCF3-210ENST00000473311 MTMR6Q9Y217 621 aa16.67■□□□□ 0.26
ABCF3-210ENST00000473311 CCDC171Q6TFL3 1326 aa16.67■□□□□ 0.26
ABCF3-210ENST00000473311 ALDH1L1O75891 902 aa16.67■□□□□ 0.26
ABCF3-210ENST00000473311 EVI5LQ96CN4 794 aa16.67■□□□□ 0.26
ABCF3-210ENST00000473311 PLCB2Q00722 1185 aa16.66■□□□□ 0.26
ABCF3-210ENST00000473311 C1orf141Q5JVX7 400 aa16.66■□□□□ 0.26
ABCF3-210ENST00000473311 GIMAP6Q6P9H5 292 aa16.66■□□□□ 0.26
ABCF3-210ENST00000473311 RBM33Q96EV2 1170 aaKnown RBP16.66■□□□□ 0.26
ABCF3-210ENST00000473311 TM6SF1Q9BZW5 370 aa16.66■□□□□ 0.26
ABCF3-210ENST00000473311 KSR2Q6VAB6 950 aa16.66■□□□□ 0.26
ABCF3-210ENST00000473311 RBM8AQ9Y5S9 174 aaKnown RBP16.66■□□□□ 0.26
ABCF3-210ENST00000473311 TEX2Q8IWB9 1127 aa16.65■□□□□ 0.26
ABCF3-210ENST00000473311 NECAB1Q8N987 351 aa16.65■□□□□ 0.26
ABCF3-210ENST00000473311 DNAJC2Q99543 621 aaKnown RBP16.65■□□□□ 0.26
ABCF3-210ENST00000473311 HDAC5Q9UQL6 1122 aa16.65■□□□□ 0.26
ABCF3-210ENST00000473311 RNMTO43148 476 aaKnown RBP16.65■□□□□ 0.26
ABCF3-210ENST00000473311 PSME1Q06323 249 aa16.65■□□□□ 0.26
ABCF3-210ENST00000473311 NECTIN1Q15223 517 aa16.65■□□□□ 0.26
ABCF3-210ENST00000473311 ME3Q16798 604 aa16.65■□□□□ 0.26
ABCF3-210ENST00000473311 NFAT5O94916 1531 aa16.65■□□□□ 0.26
ABCF3-210ENST00000473311 GIGYF1O75420 1035 aaPredicted RBP16.65■□□□□ 0.26
ABCF3-210ENST00000473311 CBX1P83916 185 aa16.65■□□□□ 0.26
ABCF3-210ENST00000473311 FAM227BQ96M60 508 aa16.65■□□□□ 0.26
ABCF3-210ENST00000473311 LMO7Q8WWI1 1683 aa16.64■□□□□ 0.26
ABCF3-210ENST00000473311 PRAMEF22A3QJZ6 481 aa16.64■□□□□ 0.25
ABCF3-210ENST00000473311 CREB3L3Q68CJ9 461 aa16.64■□□□□ 0.25
ABCF3-210ENST00000473311 KCNH5Q8NCM2 988 aa16.64■□□□□ 0.25
ABCF3-210ENST00000473311 CCDC8Q9H0W5 538 aaPredicted RBP16.64■□□□□ 0.25
ABCF3-210ENST00000473311 TTC12Q9H892 705 aaPredicted RBP16.64■□□□□ 0.25
ABCF3-210ENST00000473311 G3BP1Q13283 466 aaKnown RBP eCLIP16.64■□□□□ 0.251e-6■■■■□ 24.7
ABCF3-210ENST00000473311 NMIQ13287 307 aaPredicted RBP16.64■□□□□ 0.25
ABCF3-210ENST00000473311 ST3GAL1Q11201 340 aa16.63■□□□□ 0.25
ABCF3-210ENST00000473311 AIMP1Q12904 312 aaKnown RBP16.63■□□□□ 0.25
ABCF3-210ENST00000473311 AMOTQ4VCS5 1084 aa16.63■□□□□ 0.25
ABCF3-210ENST00000473311 ESCO1Q5FWF5 840 aa16.63■□□□□ 0.25
ABCF3-210ENST00000473311 KCNB2Q92953 911 aa16.63■□□□□ 0.25
ABCF3-210ENST00000473311 SUCLG2Q96I99 432 aa16.63■□□□□ 0.25
ABCF3-210ENST00000473311 GRM8O00222 908 aa16.63■□□□□ 0.25
ABCF3-210ENST00000473311 BICC1Q9H694 974 aaKnown RBP16.63■□□□□ 0.25
ABCF3-210ENST00000473311 HIP1O00291 1037 aa16.62■□□□□ 0.25
ABCF3-210ENST00000473311 KDM4AO75164 1064 aa16.62■□□□□ 0.25
ABCF3-210ENST00000473311 SASH1O94885 1247 aa16.62■□□□□ 0.25
ABCF3-210ENST00000473311 LARP1BQ659C4 914 aaKnown RBP16.62■□□□□ 0.25
ABCF3-210ENST00000473311 PIBF1Q8WXW3 757 aa16.62■□□□□ 0.25
ABCF3-210ENST00000473311 EAF2Q96CJ1 260 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-210ENST00000473311 ZFP91Q96JP5 570 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-210ENST00000473311 SIL1Q9H173 461 aa16.62■□□□□ 0.25
ABCF3-210ENST00000473311 TPCN1Q9ULQ1 816 aa16.62■□□□□ 0.25
ABCF3-210ENST00000473311 PXDNQ92626 1479 aa16.62■□□□□ 0.25
ABCF3-210ENST00000473311 LINS1Q8NG48 757 aa16.62■□□□□ 0.25
ABCF3-210ENST00000473311 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.62■□□□□ 0.25
ABCF3-210ENST00000473311 FER1L4A9Z1Z3 1794 aa16.61■□□□□ 0.25
ABCF3-210ENST00000473311 CCDC66A2RUB6 948 aa16.61■□□□□ 0.25
ABCF3-210ENST00000473311 PSMA5P28066 241 aa16.61■□□□□ 0.25
ABCF3-210ENST00000473311 FERMT3Q86UX7 667 aa16.61■□□□□ 0.25
ABCF3-210ENST00000473311 MAP4K1Q92918 833 aa16.61■□□□□ 0.25
ABCF3-210ENST00000473311 FUCA2Q9BTY2 467 aa16.61■□□□□ 0.25
ABCF3-210ENST00000473311 FEZ1Q99689 392 aa16.61■□□□□ 0.25
ABCF3-210ENST00000473311 FSD1Q9BTV5 496 aa16.61■□□□□ 0.25
ABCF3-210ENST00000473311 BOLA2Q9H3K6 86 aa16.61■□□□□ 0.25
ABCF3-210ENST00000473311 SLC27A2O14975 620 aa16.6■□□□□ 0.25
ABCF3-210ENST00000473311 NOLC1Q14978 699 aaKnown RBP eCLIP16.6■□□□□ 0.25
ABCF3-210ENST00000473311 TCEANC2Q96MN5 208 aa16.6■□□□□ 0.25
ABCF3-210ENST00000473311 TLR7Q9NYK1 1049 aaKnown RBP16.6■□□□□ 0.25
ABCF3-210ENST00000473311 CHMP3Q9Y3E7 222 aa16.6■□□□□ 0.25
ABCF3-210ENST00000473311 ADGRL3Q9HAR2 1447 aa16.6■□□□□ 0.25
ABCF3-210ENST00000473311 DDX58O95786 925 aaKnown RBP16.6■□□□□ 0.25
ABCF3-210ENST00000473311 CHRM1P11229 460 aaPredicted RBP16.6■□□□□ 0.25
ABCF3-210ENST00000473311 KRT85P78386 507 aa16.6■□□□□ 0.25
ABCF3-210ENST00000473311 KAZALD1Q96I82 304 aa16.6■□□□□ 0.25
ABCF3-210ENST00000473311 CGNQ9P2M7 1197 aaKnown RBP16.6■□□□□ 0.25
ABCF3-210ENST00000473311 A0A0D9SFI3 127 aa16.6■□□□□ 0.25
ABCF3-210ENST00000473311 COL9A3Q14050 684 aaPredicted RBP16.6■□□□□ 0.25
ABCF3-210ENST00000473311 BLOC1S2Q6QNY1 142 aa16.6■□□□□ 0.25
ABCF3-210ENST00000473311 C17orf53Q8N3J3 647 aaPredicted RBP16.6■□□□□ 0.25
ABCF3-210ENST00000473311 RNF20Q5VTR2 975 aa16.59■□□□□ 0.25
ABCF3-210ENST00000473311 CDC37L1Q7L3B6 337 aa16.59■□□□□ 0.25
ABCF3-210ENST00000473311 NCAPD2Q15021 1401 aa16.59■□□□□ 0.25
ABCF3-210ENST00000473311 FAM173BQ6P4H8 233 aa16.59■□□□□ 0.25
ABCF3-210ENST00000473311 LMOD2Q6P5Q4 547 aa16.59■□□□□ 0.25
ABCF3-210ENST00000473311 TTC6Q86TZ1 520 aa16.59■□□□□ 0.25
ABCF3-210ENST00000473311 KIF3AQ9Y496 699 aa16.59■□□□□ 0.25
ABCF3-210ENST00000473311 CHD2O14647 1828 aaKnown RBP16.58■□□□□ 0.25
ABCF3-210ENST00000473311 CCDC192P0DO97 292 aa16.58■□□□□ 0.25
ABCF3-210ENST00000473311 IRX3P78415 501 aaPredicted RBP16.58■□□□□ 0.25
ABCF3-210ENST00000473311 GABPB1Q06547 395 aaPredicted RBP16.58■□□□□ 0.25
ABCF3-210ENST00000473311 TSPYL1Q9H0U9 437 aa16.58■□□□□ 0.25
ABCF3-210ENST00000473311 GCP02774 474 aa16.58■□□□□ 0.24
ABCF3-210ENST00000473311 PDCP20941 246 aa16.58■□□□□ 0.24
ABCF3-210ENST00000473311 RIC3Q7Z5B4 369 aa16.58■□□□□ 0.24
ABCF3-210ENST00000473311 KLHDC4Q8TBB5 520 aa16.58■□□□□ 0.24
ABCF3-210ENST00000473311 ANKRD24Q8TF21 1146 aa16.57■□□□□ 0.24
ABCF3-210ENST00000473311 DDX21Q9NR30 783 aaKnown RBP eCLIP16.57■□□□□ 0.24
ABCF3-210ENST00000473311 HEG1Q9ULI3 1381 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms