RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 POTEJP0CG39 1038 aa25.54■■□□□ 1.68
APTX-218ENST00000473270 LMOD1P29536 600 aaPredicted RBP25.54■■□□□ 1.68
APTX-218ENST00000473270 EPHX2P34913 555 aa25.54■■□□□ 1.68
APTX-218ENST00000473270 OLFM4Q6UX06 510 aa25.54■■□□□ 1.68
APTX-218ENST00000473270 TTLL7Q6ZT98 887 aa25.54■■□□□ 1.68
APTX-218ENST00000473270 GPC2Q8N158 579 aa25.54■■□□□ 1.68
APTX-218ENST00000473270 CAPN15O75808 1086 aa25.53■■□□□ 1.68
APTX-218ENST00000473270 CRY2Q49AN0 593 aa25.53■■□□□ 1.68
APTX-218ENST00000473270 PARP10Q53GL7 1025 aa25.53■■□□□ 1.68
APTX-218ENST00000473270 ZNF541Q9H0D2 1346 aa25.53■■□□□ 1.68
APTX-218ENST00000473270 SCN4AP35499 1836 aa25.52■■□□□ 1.68
APTX-218ENST00000473270 EIF2S2P20042 333 aaKnown RBP25.52■■□□□ 1.68
APTX-218ENST00000473270 RIPK4P57078 832 aa25.52■■□□□ 1.68
APTX-218ENST00000473270 NLRP3Q96P20 1036 aa25.52■■□□□ 1.68
APTX-218ENST00000473270 IBTKQ9P2D0 1353 aaPredicted RBP25.52■■□□□ 1.68
APTX-218ENST00000473270 TMEM88BA6NKF7 163 aa25.51■■□□□ 1.67
APTX-218ENST00000473270 FZD9O00144 591 aa25.51■■□□□ 1.67
APTX-218ENST00000473270 GIGYF2Q6Y7W6 1299 aaKnown RBP25.51■■□□□ 1.67
APTX-218ENST00000473270 AIDAQ96BJ3 306 aa25.51■■□□□ 1.67
APTX-218ENST00000473270 GJA3Q9Y6H8 435 aa25.51■■□□□ 1.67
APTX-218ENST00000473270 RNF123Q5XPI4 1314 aa25.5■■□□□ 1.67
APTX-218ENST00000473270 LARGE2Q8N3Y3 721 aa25.5■■□□□ 1.67
APTX-218ENST00000473270 ABCC12Q96J65 1359 aa25.49■■□□□ 1.67
APTX-218ENST00000473270 PPEF1O14829 653 aaPredicted RBP25.49■■□□□ 1.67
APTX-218ENST00000473270 HOXA10P31260 410 aaPredicted RBP25.49■■□□□ 1.67
APTX-218ENST00000473270 SUSD4Q5VX71 490 aa25.49■■□□□ 1.67
APTX-218ENST00000473270 CRAMP1Q96RY5 1269 aa25.49■■□□□ 1.67
APTX-218ENST00000473270 BABAM1Q9NWV8 329 aa25.49■■□□□ 1.67
APTX-218ENST00000473270 PCNTO95613 3336 aa25.49■■□□□ 1.67
APTX-218ENST00000473270 DLG5Q8TDM6 1919 aa25.49■■□□□ 1.67
APTX-218ENST00000473270 KDM3BQ7LBC6 1761 aa25.49■■□□□ 1.67
APTX-218ENST00000473270 TCERG1O14776 1098 aaKnown RBP25.48■■□□□ 1.67
APTX-218ENST00000473270 UTP14AQ9BVJ6 771 aaKnown RBP25.48■■□□□ 1.67
APTX-218ENST00000473270 HSP90AB3PQ58FF7 597 aa25.47■■□□□ 1.67
APTX-218ENST00000473270 ZNF34Q8IZ26 560 aa25.47■■□□□ 1.67
APTX-218ENST00000473270 MRS2Q9HD23 443 aa25.47■■□□□ 1.67
APTX-218ENST00000473270 RIC1Q4ADV7 1423 aa25.46■■□□□ 1.67
APTX-218ENST00000473270 CNTNAP1P78357 1384 aa25.46■■□□□ 1.67
APTX-218ENST00000473270 UBN2Q6ZU65 1347 aa25.46■■□□□ 1.67
APTX-218ENST00000473270 PASKQ96RG2 1323 aa25.46■■□□□ 1.67
APTX-218ENST00000473270 NIM1KQ8IY84 436 aa25.46■■□□□ 1.67
APTX-218ENST00000473270 CNTROBQ8N137 903 aa25.46■■□□□ 1.67
APTX-218ENST00000473270 NUP98P52948 1817 aa25.46■■□□□ 1.67
APTX-218ENST00000473270 WDR43Q15061 677 aaKnown RBP eCLIP25.45■■□□□ 1.66
APTX-218ENST00000473270 NTSR2O95665 410 aa25.44■■□□□ 1.66
APTX-218ENST00000473270 SUPT20HQ8NEM7 779 aa25.44■■□□□ 1.66
APTX-218ENST00000473270 MAP1SQ66K74 1059 aaPredicted RBP25.43■■□□□ 1.66
APTX-218ENST00000473270 PPIP5K2O43314 1243 aa25.42■■□□□ 1.66
APTX-218ENST00000473270 ITGBL1O95965 494 aaPredicted RBP25.42■■□□□ 1.66
APTX-218ENST00000473270 AIMP1Q12904 312 aaKnown RBP25.42■■□□□ 1.66
APTX-218ENST00000473270 VPS33BQ9H267 617 aa25.42■■□□□ 1.66
APTX-218ENST00000473270 ABT1Q9ULW3 272 aaKnown RBP25.42■■□□□ 1.66
APTX-218ENST00000473270 CCER2I3L3R5 266 aa25.41■■□□□ 1.66
APTX-218ENST00000473270 TMPOP42166 694 aaKnown RBP25.41■■□□□ 1.66
APTX-218ENST00000473270 NEUROD2Q15784 382 aa25.41■■□□□ 1.66
APTX-218ENST00000473270 DEFB115Q30KQ5 88 aa25.4■■□□□ 1.66
APTX-218ENST00000473270 CCDC184Q52MB2 194 aa25.4■■□□□ 1.66
APTX-218ENST00000473270 MIER1Q8N108 512 aa25.4■■□□□ 1.66
APTX-218ENST00000473270 NECTIN2Q92692 538 aa25.4■■□□□ 1.66
APTX-218ENST00000473270 LAS1LQ9Y4W2 734 aaKnown RBP25.4■■□□□ 1.66
APTX-218ENST00000473270 VEGFBP49765 207 aa25.39■■□□□ 1.66
APTX-218ENST00000473270 DDX46Q7L014 1031 aaKnown RBP25.39■■□□□ 1.66
APTX-218ENST00000473270 TRMT112Q9UI30 125 aaKnown RBP25.39■■□□□ 1.66
APTX-218ENST00000473270 ATP6V0A2Q9Y487 856 aa25.39■■□□□ 1.66
APTX-218ENST00000473270 BBOX1O75936 387 aa25.38■■□□□ 1.65
APTX-218ENST00000473270 CTCFP49711 727 aaPredicted RBP25.38■■□□□ 1.65
APTX-218ENST00000473270 SLC10A5Q5PT55 438 aa25.38■■□□□ 1.65
APTX-218ENST00000473270 DPP8Q6V1X1 898 aaPredicted RBP25.38■■□□□ 1.65
APTX-218ENST00000473270 USP50Q70EL3 339 aaPredicted RBP25.38■■□□□ 1.65
APTX-218ENST00000473270 COPS6Q7L5N1 327 aa25.38■■□□□ 1.65
APTX-218ENST00000473270 ANXA1P04083 346 aa25.36■■□□□ 1.65
APTX-218ENST00000473270 PDIA6Q15084 440 aa25.36■■□□□ 1.65
APTX-218ENST00000473270 AOC3Q16853 763 aa25.36■■□□□ 1.65
APTX-218ENST00000473270 PAXIP1Q6ZW49 1069 aaPredicted RBP25.36■■□□□ 1.65
APTX-218ENST00000473270 XAGE3Q8WTP9 111 aa25.36■■□□□ 1.65
APTX-218ENST00000473270 DDX21Q9NR30 783 aaKnown RBP eCLIP25.35■■□□□ 1.65
APTX-218ENST00000473270 SH3TC1Q8TE82 1336 aa25.35■■□□□ 1.65
APTX-218ENST00000473270 FOXN1O15353 648 aa25.34■■□□□ 1.65
APTX-218ENST00000473270 EPS15P42566 896 aa25.34■■□□□ 1.65
APTX-218ENST00000473270 MAP2K1Q02750 393 aaPredicted RBP25.34■■□□□ 1.65
APTX-218ENST00000473270 PROSER3Q2NL68 480 aa25.34■■□□□ 1.65
APTX-218ENST00000473270 MPNDQ8N594 471 aa25.34■■□□□ 1.65
APTX-218ENST00000473270 BEGAINQ9BUH8 593 aa25.34■■□□□ 1.65
APTX-218ENST00000473270 PRDM10Q9NQV6 1147 aa25.34■■□□□ 1.65
APTX-218ENST00000473270 ZNRF3Q9ULT6 936 aa25.34■■□□□ 1.65
APTX-218ENST00000473270 ABCC4O15439 1325 aa25.34■■□□□ 1.65
APTX-218ENST00000473270 RASSF10A6NK89 507 aa25.33■■□□□ 1.65
APTX-218ENST00000473270 HCLS1P14317 486 aaPredicted RBP25.33■■□□□ 1.65
APTX-218ENST00000473270 TCIRG1Q13488 830 aa25.33■■□□□ 1.65
APTX-218ENST00000473270 C3orf67Q6ZVT6 689 aa25.33■■□□□ 1.65
APTX-218ENST00000473270 TMC4Q7Z404 712 aa25.33■■□□□ 1.65
APTX-218ENST00000473270 NLRP10Q86W26 655 aa25.33■■□□□ 1.65
APTX-218ENST00000473270 SP8Q8IXZ3 490 aa25.33■■□□□ 1.65
APTX-218ENST00000473270 CCDC146Q8IYE0 955 aa25.33■■□□□ 1.65
APTX-218ENST00000473270 SNED1Q8TER0 1413 aa25.33■■□□□ 1.65
APTX-218ENST00000473270 RUNDC1Q96C34 613 aa25.33■■□□□ 1.65
APTX-218ENST00000473270 ECE1P42892 770 aa25.32■■□□□ 1.64
APTX-218ENST00000473270 SCNN1DP51172 638 aa25.32■■□□□ 1.64
APTX-218ENST00000473270 TNIP1Q15025 636 aa25.32■■□□□ 1.64
APTX-218ENST00000473270 BCL2L13Q9BXK5 485 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms