RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 ZNF34Q8IZ26 560 aa34.12■■■■□ 3.05
HOXB3-207ENST00000472863 ZBTB47Q9UFB7 747 aaPredicted RBP34.12■■■■□ 3.05
HOXB3-207ENST00000472863 FOXO4P98177 505 aa34.11■■■■□ 3.05
HOXB3-207ENST00000472863 AMIGO3Q86WK7 504 aa34.11■■■■□ 3.05
HOXB3-207ENST00000472863 FAM89AQ96GI7 184 aa34.11■■■■□ 3.05
HOXB3-207ENST00000472863 RABL6Q3YEC7 729 aaPredicted RBP34.1■■■■□ 3.05
HOXB3-207ENST00000472863 ANKRD36CQ5JPF3 1778 aa34.1■■■■□ 3.05
HOXB3-207ENST00000472863 UBN2Q6ZU65 1347 aa34.1■■■■□ 3.05
HOXB3-207ENST00000472863 PA2G4Q9UQ80 394 aaKnown RBP34.1■■■■□ 3.05
HOXB3-207ENST00000472863 PCCAP05165 728 aaPredicted RBP34.09■■■■□ 3.05
HOXB3-207ENST00000472863 ZBTB38Q8NAP3 1195 aaPredicted RBP34.09■■■■□ 3.05
HOXB3-207ENST00000472863 SYNE4Q8N205 404 aa34.08■■■■□ 3.05
HOXB3-207ENST00000472863 LRRCC1Q9C099 1032 aa34.08■■■■□ 3.05
HOXB3-207ENST00000472863 RTCBQ9Y3I0 505 aaKnown RBP34.08■■■■□ 3.05
HOXB3-207ENST00000472863 LMBR1LQ6UX01 489 aa34.07■■■■□ 3.04
HOXB3-207ENST00000472863 PROM2Q8N271 834 aa34.07■■■■□ 3.04
HOXB3-207ENST00000472863 NOP58Q9Y2X3 529 aaKnown RBP34.07■■■■□ 3.04
HOXB3-207ENST00000472863 C4BP0C0L5 1744 aa34.07■■■■□ 3.04
HOXB3-207ENST00000472863 SLC27A3Q5K4L6 730 aa34.06■■■■□ 3.04
HOXB3-207ENST00000472863 OTUD7AQ8TE49 926 aaPredicted RBP34.06■■■■□ 3.04
HOXB3-207ENST00000472863 KLHDC4Q8TBB5 520 aa34.05■■■■□ 3.04
HOXB3-207ENST00000472863 TRMT112Q9UI30 125 aaKnown RBP34.05■■■■□ 3.04
HOXB3-207ENST00000472863 APBA3O96018 575 aa34.04■■■■□ 3.04
HOXB3-207ENST00000472863 RAB11FIP3O75154 756 aa34.04■■■■□ 3.04
HOXB3-207ENST00000472863 TXNRD1Q16881 649 aa34.04■■■■□ 3.04
HOXB3-207ENST00000472863 AK7Q96M32 723 aa34.04■■■■□ 3.04
HOXB3-207ENST00000472863 PLEKHM2Q8IWE5 1019 aa34.03■■■■□ 3.04
HOXB3-207ENST00000472863 SUSD4Q5VX71 490 aa34.02■■■■□ 3.04
HOXB3-207ENST00000472863 ARHGEF1Q92888 912 aaKnown RBP34.02■■■■□ 3.04
HOXB3-207ENST00000472863 NIP7Q9Y221 180 aaKnown RBP eCLIP34.02■■■■□ 3.04
HOXB3-207ENST00000472863 RFX5P48382 616 aaPredicted RBP34.02■■■■□ 3.04
HOXB3-207ENST00000472863 CLEC4GQ6UXB4 293 aa34.02■■■■□ 3.04
HOXB3-207ENST00000472863 RHPN1Q8TCX5 695 aa34.02■■■■□ 3.04
HOXB3-207ENST00000472863 BACH2Q9BYV9 841 aa34.02■■■■□ 3.04
HOXB3-207ENST00000472863 SRP68Q9UHB9 627 aaKnown RBP34.02■■■■□ 3.04
HOXB3-207ENST00000472863 NARFQ9UHQ1 456 aa34.02■■■■□ 3.04
HOXB3-207ENST00000472863 ZNF652Q9Y2D9 606 aa34.02■■■■□ 3.04
HOXB3-207ENST00000472863 HSP90AB4PQ58FF6 505 aa34.01■■■■□ 3.04
HOXB3-207ENST00000472863 BCL2L12Q9HB09 334 aa34.01■■■■□ 3.04
HOXB3-207ENST00000472863 IL1RAPL2Q9NP60 686 aa34.01■■■■□ 3.04
HOXB3-207ENST00000472863 CHMP3Q9Y3E7 222 aa34.01■■■■□ 3.04
HOXB3-207ENST00000472863 FAM177BA6PVY3 158 aa34■■■■□ 3.03
HOXB3-207ENST00000472863 PLSCR1O15162 318 aa34■■■■□ 3.03
HOXB3-207ENST00000472863 PHF14O94880 888 aa34■■■■□ 3.03
HOXB3-207ENST00000472863 USPL1Q5W0Q7 1092 aa34■■■■□ 3.03
HOXB3-207ENST00000472863 BCORQ6W2J9 1755 aa34■■■■□ 3.03
HOXB3-207ENST00000472863 OS9Q13438 667 aaPredicted RBP34■■■■□ 3.03
HOXB3-207ENST00000472863 FAM161AQ3B820 660 aa33.99■■■■□ 3.03
HOXB3-207ENST00000472863 C8orf34Q49A92 452 aa33.99■■■■□ 3.03
HOXB3-207ENST00000472863 SIL1Q9H173 461 aa33.99■■■■□ 3.03
HOXB3-207ENST00000472863 CDHR2Q9BYE9 1310 aa33.99■■■■□ 3.03
HOXB3-207ENST00000472863 KIF1BPQ96EK5 621 aa33.98■■■■□ 3.03
HOXB3-207ENST00000472863 PLA2G12BQ9BX93 195 aa33.98■■■■□ 3.03
HOXB3-207ENST00000472863 PTPN12Q05209 780 aaKnown RBP33.98■■■■□ 3.03
HOXB3-207ENST00000472863 TRAPPC3LQ5T215 181 aa33.98■■■■□ 3.03
HOXB3-207ENST00000472863 ZPR1O75312 459 aa33.97■■■■□ 3.03
HOXB3-207ENST00000472863 PARP10Q53GL7 1025 aa33.97■■■■□ 3.03
HOXB3-207ENST00000472863 COPRSQ9NQ92 184 aa33.97■■■■□ 3.03
HOXB3-207ENST00000472863 IRS4O14654 1257 aaPredicted RBP33.96■■■■□ 3.03
HOXB3-207ENST00000472863 G3BP1Q13283 466 aaKnown RBP eCLIP33.96■■■■□ 3.03
HOXB3-207ENST00000472863 UTP14AQ9BVJ6 771 aaKnown RBP33.96■■■■□ 3.03
HOXB3-207ENST00000472863 RFC4P35249 363 aa33.94■■■■□ 3.02
HOXB3-207ENST00000472863 TBC1D9BQ66K14 1250 aa33.94■■■■□ 3.02
HOXB3-207ENST00000472863 BICDL1Q6ZP65 573 aa33.94■■■■□ 3.02
HOXB3-207ENST00000472863 CCDC85AQ96PX6 553 aaPredicted RBP33.94■■■■□ 3.02
HOXB3-207ENST00000472863 SASH1O94885 1247 aa33.93■■■■□ 3.02
HOXB3-207ENST00000472863 CSF1RP07333 972 aa33.93■■■■□ 3.02
HOXB3-207ENST00000472863 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.92■■■■□ 3.02
HOXB3-207ENST00000472863 RGL2O15211 777 aa33.92■■■■□ 3.02
HOXB3-207ENST00000472863 RBM19Q9Y4C8 960 aaKnown RBP33.92■■■■□ 3.02
HOXB3-207ENST00000472863 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP33.92■■■■□ 3.02
HOXB3-207ENST00000472863 SCN7AQ01118 1682 aa33.92■■■■□ 3.02
HOXB3-207ENST00000472863 SH3TC1Q8TE82 1336 aa33.92■■■■□ 3.02
HOXB3-207ENST00000472863 ERC1Q8IUD2 1116 aa33.92■■■■□ 3.02
HOXB3-207ENST00000472863 NTSR2O95665 410 aa33.91■■■■□ 3.02
HOXB3-207ENST00000472863 SALL3Q9BXA9 1300 aa33.91■■■■□ 3.02
HOXB3-207ENST00000472863 UBR3Q6ZT12 1888 aa33.9■■■■□ 3.02
HOXB3-207ENST00000472863 USP42Q9H9J4 1324 aaKnown RBP33.9■■■■□ 3.02
HOXB3-207ENST00000472863 HCLS1P14317 486 aaPredicted RBP33.9■■■■□ 3.02
HOXB3-207ENST00000472863 PDE1AP54750 535 aa33.9■■■■□ 3.02
HOXB3-207ENST00000472863 NUTM1Q86Y26 1132 aa33.9■■■■□ 3.02
HOXB3-207ENST00000472863 TTLL11Q8NHH1 800 aa33.9■■■■□ 3.02
HOXB3-207ENST00000472863 ZNF594Q96JF6 807 aaPredicted RBP33.9■■■■□ 3.02
HOXB3-207ENST00000472863 PDE8AO60658 829 aa33.89■■■■□ 3.02
HOXB3-207ENST00000472863 C4AP0C0L4 1744 aa33.89■■■■□ 3.02
HOXB3-207ENST00000472863 ADRA2BP18089 450 aa33.89■■■■□ 3.02
HOXB3-207ENST00000472863 CTSWP56202 376 aa33.89■■■■□ 3.02
HOXB3-207ENST00000472863 BMP2KLQ5H9B9 411 aa33.89■■■■□ 3.02
HOXB3-207ENST00000472863 TNS1Q9HBL0 1735 aaKnown RBP33.88■■■■□ 3.01
HOXB3-207ENST00000472863 TSHZ3Q63HK5 1081 aa33.88■■■■□ 3.01
HOXB3-207ENST00000472863 GSPT1P15170 499 aaKnown RBP33.87■■■■□ 3.01
HOXB3-207ENST00000472863 CCDC57Q2TAC2 916 aa33.87■■■■□ 3.01
HOXB3-207ENST00000472863 MX1P20591 662 aa33.87■■■■□ 3.01
HOXB3-207ENST00000472863 TTC22Q5TAA0 569 aa33.87■■■■□ 3.01
HOXB3-207ENST00000472863 OSBPL3Q9H4L5 887 aa33.87■■■■□ 3.01
HOXB3-207ENST00000472863 CLASRPQ8N2M8 674 aaKnown RBP33.86■■■■□ 3.01
HOXB3-207ENST00000472863 GREM2Q9H772 168 aa33.86■■■■□ 3.01
HOXB3-207ENST00000472863 SETDB2Q96T68 719 aa33.85■■■■□ 3.01
HOXB3-207ENST00000472863 SSFA2P28290 1259 aa33.85■■■■□ 3.01
HOXB3-207ENST00000472863 MYH3P11055 1940 aa33.84■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms