RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	COL15A1	P39059	1388 aa		13.29	□□□□□ -0.28
MRPS18B-208	ENST00000472267	TRIM37	O94972	964 aa		13.29	□□□□□ -0.28
MRPS18B-208	ENST00000472267	LMBR1L	Q6UX01	489 aa		13.29	□□□□□ -0.28
MRPS18B-208	ENST00000472267	NLRP10	Q86W26	655 aa		13.29	□□□□□ -0.28
MRPS18B-208	ENST00000472267	RHPN1	Q8TCX5	695 aa		13.29	□□□□□ -0.28
MRPS18B-208	ENST00000472267	FBXO41	Q8TF61	875 aa		13.29	□□□□□ -0.28
MRPS18B-208	ENST00000472267	KIF1BP	Q96EK5	621 aa		13.29	□□□□□ -0.28
MRPS18B-208	ENST00000472267	SIL1	Q9H173	461 aa		13.29	□□□□□ -0.28
MRPS18B-208	ENST00000472267	NOP58	Q9Y2X3	529 aa	Known RBP	13.29	□□□□□ -0.28
MRPS18B-208	ENST00000472267	CNTNAP4	Q9C0A0	1308 aa		13.29	□□□□□ -0.28
MRPS18B-208	ENST00000472267	LY75	O60449	1722 aa		13.29	□□□□□ -0.28
MRPS18B-208	ENST00000472267	RXRB	P28702	533 aa		13.28	□□□□□ -0.28
MRPS18B-208	ENST00000472267	FOXO4	P98177	505 aa		13.28	□□□□□ -0.28
MRPS18B-208	ENST00000472267	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
MRPS18B-208	ENST00000472267	SMIM5	Q71RC9	77 aa		13.28	□□□□□ -0.28
MRPS18B-208	ENST00000472267	KLHDC4	Q8TBB5	520 aa		13.28	□□□□□ -0.28
MRPS18B-208	ENST00000472267	FAM89A	Q96GI7	184 aa		13.28	□□□□□ -0.28
MRPS18B-208	ENST00000472267	CAMTA2	O94983	1202 aa		13.28	□□□□□ -0.28
MRPS18B-208	ENST00000472267	PCCA	P05165	728 aa	Predicted RBP	13.28	□□□□□ -0.28
MRPS18B-208	ENST00000472267	RABL6	Q3YEC7	729 aa	Predicted RBP	13.28	□□□□□ -0.28
MRPS18B-208	ENST00000472267	BMP2KL	Q5H9B9	411 aa		13.28	□□□□□ -0.28
MRPS18B-208	ENST00000472267	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.28	□□□□□ -0.28
MRPS18B-208	ENST00000472267	FAM177B	A6PVY3	158 aa		13.27	□□□□□ -0.29
MRPS18B-208	ENST00000472267	GNPAT	O15228	680 aa		13.27	□□□□□ -0.29
MRPS18B-208	ENST00000472267	TTC22	Q5TAA0	569 aa		13.27	□□□□□ -0.29
MRPS18B-208	ENST00000472267	RC3H1	Q5TC82	1133 aa	Known RBP	13.27	□□□□□ -0.29
MRPS18B-208	ENST00000472267	NUTM1	Q86Y26	1132 aa		13.27	□□□□□ -0.29
MRPS18B-208	ENST00000472267	ERC1	Q8IUD2	1116 aa		13.27	□□□□□ -0.29
MRPS18B-208	ENST00000472267	TRMT112	Q9UI30	125 aa	Known RBP	13.27	□□□□□ -0.29
MRPS18B-208	ENST00000472267	TAF1L	Q8IZX4	1826 aa		13.27	□□□□□ -0.29
MRPS18B-208	ENST00000472267	GSPT1	P15170	499 aa	Known RBP	13.26	□□□□□ -0.29
MRPS18B-208	ENST00000472267	PDE1A	P54750	535 aa		13.26	□□□□□ -0.29
MRPS18B-208	ENST00000472267	TSHZ3	Q63HK5	1081 aa		13.26	□□□□□ -0.29
MRPS18B-208	ENST00000472267	ZNF34	Q8IZ26	560 aa		13.26	□□□□□ -0.29
MRPS18B-208	ENST00000472267	SYNE4	Q8N205	404 aa		13.26	□□□□□ -0.29
MRPS18B-208	ENST00000472267	UBN2	Q6ZU65	1347 aa		13.26	□□□□□ -0.29
MRPS18B-208	ENST00000472267	RPS6KA4	O75676	772 aa		13.25	□□□□□ -0.29
MRPS18B-208	ENST00000472267	SEC24B	O95487	1268 aa		13.25	□□□□□ -0.29
MRPS18B-208	ENST00000472267	MX1	P20591	662 aa		13.25	□□□□□ -0.29
MRPS18B-208	ENST00000472267	RFX5	P48382	616 aa	Predicted RBP	13.25	□□□□□ -0.29
MRPS18B-208	ENST00000472267	ZNF652	Q9Y2D9	606 aa		13.25	□□□□□ -0.29
MRPS18B-208	ENST00000472267	BCOR	Q6W2J9	1755 aa		13.24	□□□□□ -0.29
MRPS18B-208	ENST00000472267	PTPN12	Q05209	780 aa	Known RBP	13.24	□□□□□ -0.29
MRPS18B-208	ENST00000472267	CLASRP	Q8N2M8	674 aa	Known RBP	13.24	□□□□□ -0.29
MRPS18B-208	ENST00000472267	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.24	□□□□□ -0.29
MRPS18B-208	ENST00000472267	COPRS	Q9NQ92	184 aa		13.24	□□□□□ -0.29
MRPS18B-208	ENST00000472267	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
MRPS18B-208	ENST00000472267	RTCB	Q9Y3I0	505 aa	Known RBP	13.24	□□□□□ -0.29
MRPS18B-208	ENST00000472267	IRS4	O14654	1257 aa	Predicted RBP	13.24	□□□□□ -0.29
MRPS18B-208	ENST00000472267	MSH5	O43196	834 aa		13.24	□□□□□ -0.29
MRPS18B-208	ENST00000472267	SASH1	O94885	1247 aa		13.24	□□□□□ -0.29
MRPS18B-208	ENST00000472267	SUSD4	Q5VX71	490 aa		13.24	□□□□□ -0.29
MRPS18B-208	ENST00000472267	AK7	Q96M32	723 aa		13.24	□□□□□ -0.29
MRPS18B-208	ENST00000472267	LRRC4B	Q9NT99	713 aa		13.24	□□□□□ -0.29
MRPS18B-208	ENST00000472267	SALL3	Q9BXA9	1300 aa		13.24	□□□□□ -0.29
MRPS18B-208	ENST00000472267	CDHR2	Q9BYE9	1310 aa		13.24	□□□□□ -0.29
MRPS18B-208	ENST00000472267	C4B	P0C0L5	1744 aa		13.23	□□□□□ -0.29
MRPS18B-208	ENST00000472267	PHF14	O94880	888 aa		13.23	□□□□□ -0.29
MRPS18B-208	ENST00000472267	POTEA	Q6S8J7	498 aa		13.23	□□□□□ -0.29
MRPS18B-208	ENST00000472267	UTP14A	Q9BVJ6	771 aa	Known RBP	13.23	□□□□□ -0.29
MRPS18B-208	ENST00000472267	OSBPL3	Q9H4L5	887 aa		13.23	□□□□□ -0.29
MRPS18B-208	ENST00000472267	RGS17	Q9UGC6	210 aa	Predicted RBP	13.23	□□□□□ -0.29
MRPS18B-208	ENST00000472267	SRP68	Q9UHB9	627 aa	Known RBP	13.23	□□□□□ -0.29
MRPS18B-208	ENST00000472267	ZPR1	O75312	459 aa		13.22	□□□□□ -0.29
MRPS18B-208	ENST00000472267	IFIT2	P09913	472 aa	Known RBP	13.22	□□□□□ -0.29
MRPS18B-208	ENST00000472267	ANP32A	P39687	249 aa	Known RBP	13.22	□□□□□ -0.29
MRPS18B-208	ENST00000472267	CCDC57	Q2TAC2	916 aa		13.22	□□□□□ -0.29
MRPS18B-208	ENST00000472267	PARP10	Q53GL7	1025 aa		13.22	□□□□□ -0.29
MRPS18B-208	ENST00000472267	USPL1	Q5W0Q7	1092 aa		13.22	□□□□□ -0.29
MRPS18B-208	ENST00000472267	BICDL1	Q6ZP65	573 aa		13.22	□□□□□ -0.29
MRPS18B-208	ENST00000472267	AACS	Q86V21	672 aa		13.22	□□□□□ -0.29
MRPS18B-208	ENST00000472267	ZNF594	Q96JF6	807 aa	Predicted RBP	13.22	□□□□□ -0.29
MRPS18B-208	ENST00000472267	PLA2G12B	Q9BX93	195 aa		13.22	□□□□□ -0.29
MRPS18B-208	ENST00000472267	STAP2	Q9UGK3	403 aa		13.22	□□□□□ -0.29
MRPS18B-208	ENST00000472267	MYH3	P11055	1940 aa		13.22	□□□□□ -0.29
MRPS18B-208	ENST00000472267	CDC45	O75419	566 aa		13.21	□□□□□ -0.29
MRPS18B-208	ENST00000472267	SDS	P20132	328 aa		13.21	□□□□□ -0.29
MRPS18B-208	ENST00000472267	MFAP1	P55081	439 aa	Known RBP	13.21	□□□□□ -0.29
MRPS18B-208	ENST00000472267	TAF7L	Q5H9L4	462 aa		13.21	□□□□□ -0.29
MRPS18B-208	ENST00000472267	AMIGO3	Q86WK7	504 aa		13.21	□□□□□ -0.29
MRPS18B-208	ENST00000472267	NARF	Q9UHQ1	456 aa		13.21	□□□□□ -0.29
MRPS18B-208	ENST00000472267	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.21	□□□□□ -0.29
MRPS18B-208	ENST00000472267	TRIM6-TRIM34	B2RNG4	842 aa		13.21	□□□□□ -0.3
MRPS18B-208	ENST00000472267	PDE8A	O60658	829 aa		13.21	□□□□□ -0.3
MRPS18B-208	ENST00000472267	HCLS1	P14317	486 aa	Predicted RBP	13.21	□□□□□ -0.3
MRPS18B-208	ENST00000472267	CTSW	P56202	376 aa		13.21	□□□□□ -0.3
MRPS18B-208	ENST00000472267	SCN7A	Q01118	1682 aa		13.21	□□□□□ -0.3
MRPS18B-208	ENST00000472267	TFCP2	Q12800	502 aa		13.21	□□□□□ -0.3
MRPS18B-208	ENST00000472267	SLC27A3	Q5K4L6	730 aa		13.21	□□□□□ -0.3
MRPS18B-208	ENST00000472267	CLEC4G	Q6UXB4	293 aa		13.21	□□□□□ -0.3
MRPS18B-208	ENST00000472267	TBC1D9	Q6ZT07	1266 aa		13.21	□□□□□ -0.3
MRPS18B-208	ENST00000472267	SH3TC1	Q8TE82	1336 aa		13.21	□□□□□ -0.3
MRPS18B-208	ENST00000472267	ARHGEF1	Q92888	912 aa	Known RBP	13.21	□□□□□ -0.3
MRPS18B-208	ENST00000472267	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.21	□□□□□ -0.3
MRPS18B-208	ENST00000472267	UPF2	Q9HAU5	1272 aa	Known RBP	13.21	□□□□□ -0.3
MRPS18B-208	ENST00000472267	AOX1	Q06278	1338 aa		13.2	□□□□□ -0.3
MRPS18B-208	ENST00000472267	APBA3	O96018	575 aa		13.2	□□□□□ -0.3
MRPS18B-208	ENST00000472267	CSF1R	P07333	972 aa		13.2	□□□□□ -0.3
MRPS18B-208	ENST00000472267	IFIT5	Q13325	482 aa	Known RBP	13.2	□□□□□ -0.3
MRPS18B-208	ENST00000472267	TRAPPC3L	Q5T215	181 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms