RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 CCDC88AQ3V6T2 1871 aa19.51■□□□□ 0.71
CALD1-215ENST00000472096 ADCY9O60503 1353 aa19.5■□□□□ 0.71
CALD1-215ENST00000472096 ABCC12Q96J65 1359 aa19.5■□□□□ 0.71
CALD1-215ENST00000472096 FAM177BA6PVY3 158 aa19.5■□□□□ 0.71
CALD1-215ENST00000472096 ELL2O00472 640 aaPredicted RBP19.5■□□□□ 0.71
CALD1-215ENST00000472096 GPTP24298 496 aa19.5■□□□□ 0.71
CALD1-215ENST00000472096 TPTE2Q6XPS3 522 aa19.5■□□□□ 0.71
CALD1-215ENST00000472096 RIC1Q4ADV7 1423 aa19.5■□□□□ 0.71
CALD1-215ENST00000472096 FER1L6Q2WGJ9 1857 aa19.5■□□□□ 0.71
CALD1-215ENST00000472096 PRR29P0C7W0 189 aa19.49■□□□□ 0.71
CALD1-215ENST00000472096 AIMP1Q12904 312 aaKnown RBP19.49■□□□□ 0.71
CALD1-215ENST00000472096 ZNF34Q8IZ26 560 aa19.49■□□□□ 0.71
CALD1-215ENST00000472096 WDR63Q8IWG1 891 aa19.48■□□□□ 0.71
CALD1-215ENST00000472096 TSPYL6Q8N831 410 aa19.48■□□□□ 0.71
CALD1-215ENST00000472096 NYXQ9GZU5 481 aa19.48■□□□□ 0.71
CALD1-215ENST00000472096 FANCIQ9NVI1 1328 aa19.48■□□□□ 0.71
CALD1-215ENST00000472096 CCER2I3L3R5 266 aa19.47■□□□□ 0.71
CALD1-215ENST00000472096 TTLL6Q8N841 843 aa19.47■□□□□ 0.71
CALD1-215ENST00000472096 ZNF784Q8NCA9 323 aaPredicted RBP19.47■□□□□ 0.71
CALD1-215ENST00000472096 HYPKQ9NX55 129 aa19.47■□□□□ 0.71
CALD1-215ENST00000472096 TIAM2Q8IVF5 1701 aa19.46■□□□□ 0.71
CALD1-215ENST00000472096 DDX60Q8IY21 1712 aaKnown RBP19.46■□□□□ 0.71
CALD1-215ENST00000472096 NTSR2O95665 410 aa19.46■□□□□ 0.71
CALD1-215ENST00000472096 SRGNP10124 158 aa19.46■□□□□ 0.71
CALD1-215ENST00000472096 PARP10Q53GL7 1025 aa19.46■□□□□ 0.71
CALD1-215ENST00000472096 ARHGAP27Q6ZUM4 889 aa19.46■□□□□ 0.71
CALD1-215ENST00000472096 ZNF622Q969S3 477 aaKnown RBP eCLIP19.46■□□□□ 0.71
CALD1-215ENST00000472096 GTF2E1P29083 439 aaPredicted RBP19.45■□□□□ 0.7
CALD1-215ENST00000472096 HSP90AB3PQ58FF7 597 aa19.45■□□□□ 0.7
CALD1-215ENST00000472096 SUSD4Q5VX71 490 aa19.45■□□□□ 0.7
CALD1-215ENST00000472096 NUTM1Q86Y26 1132 aa19.45■□□□□ 0.7
CALD1-215ENST00000472096 PLBD2Q8NHP8 589 aa19.45■□□□□ 0.7
CALD1-215ENST00000472096 SPOCK2Q92563 424 aa19.45■□□□□ 0.7
CALD1-215ENST00000472096 DICER1Q9UPY3 1922 aaKnown RBP19.45■□□□□ 0.7
CALD1-215ENST00000472096 KLRG2A4D1S0 409 aaPredicted RBP19.44■□□□□ 0.7
CALD1-215ENST00000472096 ERFEQ4G0M1 354 aa19.44■□□□□ 0.7
CALD1-215ENST00000472096 CCDC30Q5VVM6 783 aa19.44■□□□□ 0.7
CALD1-215ENST00000472096 STYK1Q6J9G0 422 aa19.44■□□□□ 0.7
CALD1-215ENST00000472096 MASTLQ96GX5 879 aa19.44■□□□□ 0.7
CALD1-215ENST00000472096 TCIRG1Q13488 830 aa19.43■□□□□ 0.7
CALD1-215ENST00000472096 TWISTNBQ3B726 338 aaPredicted RBP19.43■□□□□ 0.7
CALD1-215ENST00000472096 PPP1R42Q7Z4L9 355 aa19.43■□□□□ 0.7
CALD1-215ENST00000472096 CHMP4AQ9BY43 222 aa19.43■□□□□ 0.7
CALD1-215ENST00000472096 ZNF521Q96K83 1311 aa19.43■□□□□ 0.7
CALD1-215ENST00000472096 ANKRD13DQ6ZTN6 518 aa19.42■□□□□ 0.7
CALD1-215ENST00000472096 CNKSR1Q969H4 720 aa19.42■□□□□ 0.7
CALD1-215ENST00000472096 PHAXQ9H814 394 aaKnown RBP19.42■□□□□ 0.7
CALD1-215ENST00000472096 RNF123Q5XPI4 1314 aa19.42■□□□□ 0.7
CALD1-215ENST00000472096 NPR1P16066 1061 aa19.41■□□□□ 0.7
CALD1-215ENST00000472096 PRPF40BQ6NWY9 871 aaKnown RBP19.41■□□□□ 0.7
CALD1-215ENST00000472096 NLRP10Q86W26 655 aa19.41■□□□□ 0.7
CALD1-215ENST00000472096 UTP14AQ9BVJ6 771 aaKnown RBP19.41■□□□□ 0.7
CALD1-215ENST00000472096 GOLGA2Q08379 1002 aa19.4■□□□□ 0.7
CALD1-215ENST00000472096 CRY2Q49AN0 593 aa19.4■□□□□ 0.7
CALD1-215ENST00000472096 RASSF7Q02833 373 aa19.39■□□□□ 0.69
CALD1-215ENST00000472096 DIEXFQ68CQ4 756 aaKnown RBP19.39■□□□□ 0.69
CALD1-215ENST00000472096 ISCA1Q9BUE6 129 aa19.39■□□□□ 0.69
CALD1-215ENST00000472096 C21orf2O43822 256 aa19.38■□□□□ 0.69
CALD1-215ENST00000472096 TAF1P21675 1872 aa19.38■□□□□ 0.69
CALD1-215ENST00000472096 EXOSC9Q06265 439 aaKnown RBP19.38■□□□□ 0.69
CALD1-215ENST00000472096 STK31Q9BXU1 1019 aa19.38■□□□□ 0.69
CALD1-215ENST00000472096 MYH16Q9H6N6 1097 aa19.38■□□□□ 0.69
CALD1-215ENST00000472096 NFKBIEO00221 500 aa19.37■□□□□ 0.69
CALD1-215ENST00000472096 TCERG1O14776 1098 aaKnown RBP19.37■□□□□ 0.69
CALD1-215ENST00000472096 C9orf131Q5VYM1 1079 aa19.37■□□□□ 0.69
CALD1-215ENST00000472096 RIC3Q7Z5B4 369 aa19.37■□□□□ 0.69
CALD1-215ENST00000472096 SH3TC1Q8TE82 1336 aa19.36■□□□□ 0.69
CALD1-215ENST00000472096 MYH3P11055 1940 aa19.36■□□□□ 0.69
CALD1-215ENST00000472096 ATP5J2-PTCD1G3V325 749 aa19.36■□□□□ 0.69
CALD1-215ENST00000472096 C3orf67Q6ZVT6 689 aa19.36■□□□□ 0.69
CALD1-215ENST00000472096 TRMT112Q9UI30 125 aaKnown RBP19.36■□□□□ 0.69
CALD1-215ENST00000472096 VAMP4O75379 141 aa19.35■□□□□ 0.69
CALD1-215ENST00000472096 DDX58O95786 925 aaKnown RBP19.35■□□□□ 0.69
CALD1-215ENST00000472096 SLC10A5Q5PT55 438 aa19.35■□□□□ 0.69
CALD1-215ENST00000472096 SOGA3Q5TF21 947 aa19.35■□□□□ 0.69
CALD1-215ENST00000472096 RPGRQ92834 1020 aaKnown RBP19.35■□□□□ 0.69
CALD1-215ENST00000472096 RNF181Q9P0P0 153 aa19.35■□□□□ 0.69
CALD1-215ENST00000472096 HOXA10P31260 410 aaPredicted RBP19.34■□□□□ 0.69
CALD1-215ENST00000472096 PRELPP51888 382 aa19.34■□□□□ 0.69
CALD1-215ENST00000472096 SYNE4Q8N205 404 aa19.34■□□□□ 0.69
CALD1-215ENST00000472096 C7orf43Q8WVR3 580 aa19.34■□□□□ 0.69
CALD1-215ENST00000472096 ZNF428Q96B54 188 aa19.34■□□□□ 0.69
CALD1-215ENST00000472096 CREBZFQ9NS37 354 aa19.34■□□□□ 0.69
CALD1-215ENST00000472096 SNED1Q8TER0 1413 aa19.34■□□□□ 0.69
CALD1-215ENST00000472096 LTBP3Q9NS15 1303 aa19.33■□□□□ 0.69
CALD1-215ENST00000472096 ALDH1B1P30837 517 aa19.33■□□□□ 0.68
CALD1-215ENST00000472096 TRIM28Q13263 835 aaKnown RBP19.33■□□□□ 0.68
CALD1-215ENST00000472096 G2E3Q7L622 706 aa19.33■□□□□ 0.68
CALD1-215ENST00000472096 NLRP3Q96P20 1036 aa19.33■□□□□ 0.68
CALD1-215ENST00000472096 MYD88Q99836 296 aa19.33■□□□□ 0.68
CALD1-215ENST00000472096 ZBTB47Q9UFB7 747 aaPredicted RBP19.33■□□□□ 0.68
CALD1-215ENST00000472096 LRRC37AA6NMS7 1700 aa19.33■□□□□ 0.68
CALD1-215ENST00000472096 HCLS1P14317 486 aaPredicted RBP19.32■□□□□ 0.68
CALD1-215ENST00000472096 LMNB1P20700 586 aa19.32■□□□□ 0.68
CALD1-215ENST00000472096 CCDC93Q567U6 631 aa19.32■□□□□ 0.68
CALD1-215ENST00000472096 ZNF526Q8TF50 670 aaPredicted RBP19.32■□□□□ 0.68
CALD1-215ENST00000472096 METTL22Q9BUU2 404 aaPredicted RBP19.32■□□□□ 0.68
CALD1-215ENST00000472096 TAOK3Q9H2K8 898 aa19.32■□□□□ 0.68
CALD1-215ENST00000472096 MAP3K2Q9Y2U5 619 aa19.32■□□□□ 0.68
CALD1-215ENST00000472096 KSR2Q6VAB6 950 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms