RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 ADCY9O60503 1353 aa19.27■□□□□ 0.68
SNX13-205ENST00000471744 MRPL50Q8N5N7 158 aaKnown RBP19.26■□□□□ 0.67
SNX13-205ENST00000471744 CCDC191Q8NCU4 936 aa19.26■□□□□ 0.67
SNX13-205ENST00000471744 DNAAF4Q8WXU2 420 aa19.26■□□□□ 0.67
SNX13-205ENST00000471744 MYD88Q99836 296 aa19.26■□□□□ 0.67
SNX13-205ENST00000471744 SMC4Q9NTJ3 1288 aa19.26■□□□□ 0.67
SNX13-205ENST00000471744 PTPRCP08575 1304 aa19.25■□□□□ 0.67
SNX13-205ENST00000471744 H0YIN7 160 aa19.25■□□□□ 0.67
SNX13-205ENST00000471744 DPEP1P16444 411 aa19.25■□□□□ 0.67
SNX13-205ENST00000471744 BRPF1P55201 1214 aaPredicted RBP19.25■□□□□ 0.67
SNX13-205ENST00000471744 POTEDQ86YR6 584 aa19.25■□□□□ 0.67
SNX13-205ENST00000471744 TRMT112Q9UI30 125 aaKnown RBP19.25■□□□□ 0.67
SNX13-205ENST00000471744 SH3TC1Q8TE82 1336 aa19.25■□□□□ 0.67
SNX13-205ENST00000471744 A0A0G2JLW4 131 aa19.24■□□□□ 0.67
SNX13-205ENST00000471744 ATP5J2-PTCD1G3V325 749 aa19.24■□□□□ 0.67
SNX13-205ENST00000471744 HSP90B1P14625 803 aaKnown RBP19.24■□□□□ 0.67
SNX13-205ENST00000471744 C2CD5Q86YS7 1000 aa19.24■□□□□ 0.67
SNX13-205ENST00000471744 PIM2Q9P1W9 311 aa19.24■□□□□ 0.67
SNX13-205ENST00000471744 RARSP54136 660 aaKnown RBP19.23■□□□□ 0.67
SNX13-205ENST00000471744 ERFEQ4G0M1 354 aa19.23■□□□□ 0.67
SNX13-205ENST00000471744 NUTM1Q86Y26 1132 aa19.23■□□□□ 0.67
SNX13-205ENST00000471744 CWC25Q9NXE8 425 aaPredicted RBP19.23■□□□□ 0.67
SNX13-205ENST00000471744 ARFGEF1Q9Y6D6 1849 aa19.23■□□□□ 0.67
SNX13-205ENST00000471744 KLRG2A4D1S0 409 aaPredicted RBP19.22■□□□□ 0.67
SNX13-205ENST00000471744 CHRNA5P30532 468 aa19.22■□□□□ 0.67
SNX13-205ENST00000471744 GPR162Q16538 588 aa19.22■□□□□ 0.67
SNX13-205ENST00000471744 SLC10A5Q5PT55 438 aa19.22■□□□□ 0.67
SNX13-205ENST00000471744 CCDC24Q8N4L8 307 aa19.22■□□□□ 0.67
SNX13-205ENST00000471744 COL11A2P13942 1736 aaPredicted RBP19.22■□□□□ 0.67
SNX13-205ENST00000471744 KIF16BQ96L93 1317 aa19.22■□□□□ 0.67
SNX13-205ENST00000471744 ABCC12Q96J65 1359 aa19.21■□□□□ 0.67
SNX13-205ENST00000471744 KCNA3P22001 575 aa19.21■□□□□ 0.67
SNX13-205ENST00000471744 ZBTB38Q8NAP3 1195 aaPredicted RBP19.21■□□□□ 0.67
SNX13-205ENST00000471744 LINS1Q8NG48 757 aa19.21■□□□□ 0.67
SNX13-205ENST00000471744 BCL2L13Q9BXK5 485 aa19.21■□□□□ 0.67
SNX13-205ENST00000471744 LAMB2P55268 1798 aa19.21■□□□□ 0.67
SNX13-205ENST00000471744 GRIN3BO60391 1043 aa19.2■□□□□ 0.66
SNX13-205ENST00000471744 PCCAP05165 728 aaPredicted RBP19.2■□□□□ 0.66
SNX13-205ENST00000471744 SRGNP10124 158 aa19.2■□□□□ 0.66
SNX13-205ENST00000471744 STYK1Q6J9G0 422 aa19.2■□□□□ 0.66
SNX13-205ENST00000471744 MASTLQ96GX5 879 aa19.2■□□□□ 0.66
SNX13-205ENST00000471744 NLRP3Q96P20 1036 aa19.2■□□□□ 0.66
SNX13-205ENST00000471744 TNRC6CQ9HCJ0 1690 aaKnown RBP19.2■□□□□ 0.66
SNX13-205ENST00000471744 NEURL1BA8MQ27 555 aa19.19■□□□□ 0.66
SNX13-205ENST00000471744 IGKV5-2P06315 115 aa19.19■□□□□ 0.66
SNX13-205ENST00000471744 NPR1P16066 1061 aa19.19■□□□□ 0.66
SNX13-205ENST00000471744 DALRD3Q5D0E6 543 aaKnown RBP19.19■□□□□ 0.66
SNX13-205ENST00000471744 PELP1Q8IZL8 1130 aaKnown RBP19.19■□□□□ 0.66
SNX13-205ENST00000471744 TTLL6Q8N841 843 aa19.19■□□□□ 0.66
SNX13-205ENST00000471744 CNKSR1Q969H4 720 aa19.19■□□□□ 0.66
SNX13-205ENST00000471744 DDX60Q8IY21 1712 aaKnown RBP19.19■□□□□ 0.66
SNX13-205ENST00000471744 F6X3S4 739 aa19.18■□□□□ 0.66
SNX13-205ENST00000471744 CRY2Q49AN0 593 aa19.18■□□□□ 0.66
SNX13-205ENST00000471744 ZNF622Q969S3 477 aaKnown RBP eCLIP19.18■□□□□ 0.66
SNX13-205ENST00000471744 CACNA1SQ13698 1873 aa19.18■□□□□ 0.66
SNX13-205ENST00000471744 MYH3P11055 1940 aa19.17■□□□□ 0.66
SNX13-205ENST00000471744 IPO8O15397 1037 aaKnown RBP19.17■□□□□ 0.66
SNX13-205ENST00000471744 ALDH1L1O75891 902 aa19.17■□□□□ 0.66
SNX13-205ENST00000471744 CWF19L2Q2TBE0 894 aaKnown RBP19.17■□□□□ 0.66
SNX13-205ENST00000471744 BEND3Q5T5X7 828 aa19.17■□□□□ 0.66
SNX13-205ENST00000471744 ARHGAP45Q92619 1136 aa19.17■□□□□ 0.66
SNX13-205ENST00000471744 FAM89AQ96GI7 184 aa19.17■□□□□ 0.66
SNX13-205ENST00000471744 API5Q9BZZ5 524 aaKnown RBP19.17■□□□□ 0.66
SNX13-205ENST00000471744 BCS1LQ9Y276 419 aa19.17■□□□□ 0.66
SNX13-205ENST00000471744 CDHR2Q9BYE9 1310 aa19.17■□□□□ 0.66
SNX13-205ENST00000471744 CHD4Q14839 1912 aa19.16■□□□□ 0.66
SNX13-205ENST00000471744 IRS4O14654 1257 aaPredicted RBP19.16■□□□□ 0.66
SNX13-205ENST00000471744 ALDH1B1P30837 517 aa19.16■□□□□ 0.66
SNX13-205ENST00000471744 GCKRQ14397 625 aa19.16■□□□□ 0.66
SNX13-205ENST00000471744 SLC4A10Q6U841 1118 aa19.16■□□□□ 0.66
SNX13-205ENST00000471744 RPGRQ92834 1020 aaKnown RBP19.16■□□□□ 0.66
SNX13-205ENST00000471744 SRCIN1Q9C0H9 1055 aa19.16■□□□□ 0.66
SNX13-205ENST00000471744 HCLS1P14317 486 aaPredicted RBP19.15■□□□□ 0.66
SNX13-205ENST00000471744 YBX3P16989 372 aaKnown RBP eCLIP19.15■□□□□ 0.66
SNX13-205ENST00000471744 NOB1Q9ULX3 412 aaKnown RBP19.15■□□□□ 0.66
SNX13-205ENST00000471744 HOXA10P31260 410 aaPredicted RBP19.14■□□□□ 0.65
SNX13-205ENST00000471744 SYNE4Q8N205 404 aa19.14■□□□□ 0.65
SNX13-205ENST00000471744 RBM17Q96I25 401 aaKnown RBP19.14■□□□□ 0.65
SNX13-205ENST00000471744 SLX4Q8IY92 1834 aa19.14■□□□□ 0.65
SNX13-205ENST00000471744 H7C1W4 665 aa19.13■□□□□ 0.65
SNX13-205ENST00000471744 PDE8AO60658 829 aa19.13■□□□□ 0.65
SNX13-205ENST00000471744 RTL5Q5HYW3 569 aaPredicted RBP19.13■□□□□ 0.65
SNX13-205ENST00000471744 YTHDC1Q96MU7 727 aaKnown RBP19.13■□□□□ 0.65
SNX13-205ENST00000471744 CRAMP1Q96RY5 1269 aa19.13■□□□□ 0.65
SNX13-205ENST00000471744 WWC3Q9ULE0 1092 aa19.13■□□□□ 0.65
SNX13-205ENST00000471744 NPM3O75607 178 aaKnown RBP19.12■□□□□ 0.65
SNX13-205ENST00000471744 SF3B3Q15393 1217 aaKnown RBP19.12■□□□□ 0.65
SNX13-205ENST00000471744 SOGA3Q5TF21 947 aa19.12■□□□□ 0.65
SNX13-205ENST00000471744 UBE3BQ7Z3V4 1068 aa19.12■□□□□ 0.65
SNX13-205ENST00000471744 BCAR3O75815 825 aa19.11■□□□□ 0.65
SNX13-205ENST00000471744 CCT4P50991 539 aaKnown RBP19.11■□□□□ 0.65
SNX13-205ENST00000471744 PRPF40BQ6NWY9 871 aaKnown RBP19.11■□□□□ 0.65
SNX13-205ENST00000471744 DDX46Q7L014 1031 aaKnown RBP19.11■□□□□ 0.65
SNX13-205ENST00000471744 GRM8O00222 908 aa19.1■□□□□ 0.65
SNX13-205ENST00000471744 C3orf67Q6ZVT6 689 aa19.1■□□□□ 0.65
SNX13-205ENST00000471744 PLA2G12BQ9BX93 195 aa19.1■□□□□ 0.65
SNX13-205ENST00000471744 C9orf78Q9NZ63 289 aaPredicted RBP19.1■□□□□ 0.65
SNX13-205ENST00000471744 CCDC152Q4G0S7 254 aa19.09■□□□□ 0.65
SNX13-205ENST00000471744 ZKSCAN2Q63HK3 967 aa19.09■□□□□ 0.65
SNX13-205ENST00000471744 ATF7IPQ6VMQ6 1270 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms