RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 NEURL1BA8MQ27 555 aa11.39□□□□□ -0.59
TOP3A-203ENST00000469739 HOXB7P09629 217 aa11.39□□□□□ -0.59
TOP3A-203ENST00000469739 LARP1Q6PKG0 1096 aaKnown RBP11.39□□□□□ -0.59
TOP3A-203ENST00000469739 ZDHHC9Q9Y397 364 aa11.39□□□□□ -0.59
TOP3A-203ENST00000469739 ADAMTS7Q9UKP4 1686 aa11.39□□□□□ -0.59
TOP3A-203ENST00000469739 KDM6AO15550 1401 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-203ENST00000469739 TNS3Q68CZ2 1445 aa11.39□□□□□ -0.59
TOP3A-203ENST00000469739 SNRPA1P09661 255 aaKnown RBP11.39□□□□□ -0.59
TOP3A-203ENST00000469739 NEUROD6Q96NK8 337 aa11.39□□□□□ -0.59
TOP3A-203ENST00000469739 ECHDC1Q9NTX5 307 aa11.39□□□□□ -0.59
TOP3A-203ENST00000469739 CIZ1Q9ULV3 898 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-203ENST00000469739 GOLGB1Q14789 3259 aaKnown RBP11.39□□□□□ -0.59
TOP3A-203ENST00000469739 PPFIA3O75145 1194 aa11.38□□□□□ -0.59
TOP3A-203ENST00000469739 CASTP20810 708 aaKnown RBP11.38□□□□□ -0.59
TOP3A-203ENST00000469739 GCKRQ14397 625 aa11.38□□□□□ -0.59
TOP3A-203ENST00000469739 FSD1Q9BTV5 496 aa11.38□□□□□ -0.59
TOP3A-203ENST00000469739 NSFL1CQ9UNZ2 370 aaKnown RBP11.38□□□□□ -0.59
TOP3A-203ENST00000469739 ADCK5Q3MIX3 580 aa11.38□□□□□ -0.59
TOP3A-203ENST00000469739 FMNL2Q96PY5 1086 aa11.38□□□□□ -0.59
TOP3A-203ENST00000469739 SGSM2O43147 1006 aa11.38□□□□□ -0.59
TOP3A-203ENST00000469739 TPM2P07951 284 aa11.38□□□□□ -0.59
TOP3A-203ENST00000469739 ZNF594Q96JF6 807 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-203ENST00000469739 OVOS2A0A0G2JMS6 1433 aa11.38□□□□□ -0.59
TOP3A-203ENST00000469739 ESPNB1AK53 854 aa11.37□□□□□ -0.59
TOP3A-203ENST00000469739 GLRX3O76003 335 aaKnown RBP11.37□□□□□ -0.59
TOP3A-203ENST00000469739 DCAF5Q96JK2 942 aa11.37□□□□□ -0.59
TOP3A-203ENST00000469739 JAKMIP1Q96N16 626 aaKnown RBP11.37□□□□□ -0.59
TOP3A-203ENST00000469739 SNX14Q9Y5W7 946 aa11.37□□□□□ -0.59
TOP3A-203ENST00000469739 TAF6LQ9Y6J9 622 aa11.37□□□□□ -0.59
TOP3A-203ENST00000469739 PXDNLA1KZ92 1463 aa11.37□□□□□ -0.59
TOP3A-203ENST00000469739 ALDH1L1O75891 902 aa11.37□□□□□ -0.59
TOP3A-203ENST00000469739 TFCP2Q12800 502 aa11.37□□□□□ -0.59
TOP3A-203ENST00000469739 HSP90AB4PQ58FF6 505 aa11.37□□□□□ -0.59
TOP3A-203ENST00000469739 LMBR1LQ6UX01 489 aa11.37□□□□□ -0.59
TOP3A-203ENST00000469739 ZCRB1Q8TBF4 217 aaKnown RBP11.37□□□□□ -0.59
TOP3A-203ENST00000469739 GRPEL1Q9HAV7 217 aa11.37□□□□□ -0.59
TOP3A-203ENST00000469739 SLAIN2Q9P270 581 aa11.37□□□□□ -0.59
TOP3A-203ENST00000469739 SPATA31A3Q5VYP0 1347 aa11.37□□□□□ -0.59
TOP3A-203ENST00000469739 NECAB1Q8N987 351 aa11.36□□□□□ -0.59
TOP3A-203ENST00000469739 PRDM4Q9UKN5 801 aa11.36□□□□□ -0.59
TOP3A-203ENST00000469739 SCN11AQ9UI33 1791 aa11.36□□□□□ -0.59
TOP3A-203ENST00000469739 ABCC6O95255 1503 aa11.36□□□□□ -0.59
TOP3A-203ENST00000469739 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
TOP3A-203ENST00000469739 NUCB2P80303 420 aa11.36□□□□□ -0.59
TOP3A-203ENST00000469739 NMIQ13287 307 aaPredicted RBP11.36□□□□□ -0.59
TOP3A-203ENST00000469739 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
TOP3A-203ENST00000469739 NBPF10Q6P3W6 841 aaKnown RBP11.36□□□□□ -0.59
TOP3A-203ENST00000469739 CCDC129Q6ZRS4 1044 aa11.36□□□□□ -0.59
TOP3A-203ENST00000469739 NBPF15Q8N660 670 aa11.36□□□□□ -0.59
TOP3A-203ENST00000469739 FAM177BA6PVY3 158 aa11.36□□□□□ -0.59
TOP3A-203ENST00000469739 LARGE1O95461 756 aa11.36□□□□□ -0.59
TOP3A-203ENST00000469739 AK2P54819 239 aa11.36□□□□□ -0.59
TOP3A-203ENST00000469739 DDX46Q7L014 1031 aaKnown RBP11.36□□□□□ -0.59
TOP3A-203ENST00000469739 SEC62Q99442 399 aaKnown RBP11.36□□□□□ -0.59
TOP3A-203ENST00000469739 METTL22Q9BUU2 404 aaPredicted RBP11.36□□□□□ -0.59
TOP3A-203ENST00000469739 TIMM10P62072 90 aa11.35□□□□□ -0.59
TOP3A-203ENST00000469739 STK3Q13188 491 aa11.35□□□□□ -0.59
TOP3A-203ENST00000469739 CCDC83Q8IWF9 413 aa11.35□□□□□ -0.59
TOP3A-203ENST00000469739 LSG1Q9H089 658 aaKnown RBP11.35□□□□□ -0.59
TOP3A-203ENST00000469739 A0A0D9SFI3 127 aa11.35□□□□□ -0.59
TOP3A-203ENST00000469739 KDM4FA0A1W2PPD8 638 aa11.35□□□□□ -0.59
TOP3A-203ENST00000469739 RNF214Q8ND24 703 aa11.35□□□□□ -0.59
TOP3A-203ENST00000469739 GPATCH3Q96I76 525 aa11.35□□□□□ -0.59
TOP3A-203ENST00000469739 DBNDD2Q9BQY9 259 aa11.35□□□□□ -0.59
TOP3A-203ENST00000469739 GPTP24298 496 aa11.34□□□□□ -0.59
TOP3A-203ENST00000469739 HSPA4P34932 840 aa11.34□□□□□ -0.59
TOP3A-203ENST00000469739 MRE11P49959 708 aa11.34□□□□□ -0.59
TOP3A-203ENST00000469739 SYNE4Q8N205 404 aa11.34□□□□□ -0.59
TOP3A-203ENST00000469739 MPNDQ8N594 471 aa11.34□□□□□ -0.59
TOP3A-203ENST00000469739 PKD1L3Q7Z443 1732 aa11.34□□□□□ -0.59
TOP3A-203ENST00000469739 ABCA3Q99758 1704 aa11.34□□□□□ -0.59
TOP3A-203ENST00000469739 FOSBP53539 338 aa11.33□□□□□ -0.6
TOP3A-203ENST00000469739 ZNF589Q86UQ0 364 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-203ENST00000469739 LRRC2Q9BYS8 371 aa11.33□□□□□ -0.6
TOP3A-203ENST00000469739 SNRKQ9NRH2 765 aa11.33□□□□□ -0.6
TOP3A-203ENST00000469739 LMBRD1Q9NUN5 540 aa11.33□□□□□ -0.6
TOP3A-203ENST00000469739 DBNLQ9UJU6 430 aaKnown RBP11.33□□□□□ -0.6
TOP3A-203ENST00000469739 ASAP1Q9ULH1 1129 aa11.33□□□□□ -0.6
TOP3A-203ENST00000469739 ERBB4Q15303 1308 aa11.33□□□□□ -0.6
TOP3A-203ENST00000469739 RAD50Q92878 1312 aa11.33□□□□□ -0.6
TOP3A-203ENST00000469739 GPT2Q8TD30 523 aa11.33□□□□□ -0.6
TOP3A-203ENST00000469739 RBM8AQ9Y5S9 174 aaKnown RBP11.33□□□□□ -0.6
TOP3A-203ENST00000469739 C5P01031 1676 aa11.33□□□□□ -0.6
TOP3A-203ENST00000469739 FGD1P98174 961 aa11.32□□□□□ -0.6
TOP3A-203ENST00000469739 RUFY3Q7L099 469 aa11.32□□□□□ -0.6
TOP3A-203ENST00000469739 FERMT3Q86UX7 667 aa11.32□□□□□ -0.6
TOP3A-203ENST00000469739 BTG4Q9NY30 223 aa11.32□□□□□ -0.6
TOP3A-203ENST00000469739 NAP1L2Q9ULW6 460 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-203ENST00000469739 SYCE3A1L190 88 aa11.32□□□□□ -0.6
TOP3A-203ENST00000469739 GADD45BO75293 160 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-203ENST00000469739 PTPN12Q05209 780 aaKnown RBP11.32□□□□□ -0.6
TOP3A-203ENST00000469739 HSP90AB3PQ58FF7 597 aa11.32□□□□□ -0.6
TOP3A-203ENST00000469739 ERC1Q8IUD2 1116 aa11.32□□□□□ -0.6
TOP3A-203ENST00000469739 PUS3Q9BZE2 481 aaKnown RBP11.32□□□□□ -0.6
TOP3A-203ENST00000469739 HEG1Q9ULI3 1381 aa11.32□□□□□ -0.6
TOP3A-203ENST00000469739 MTX1Q13505 466 aa11.32□□□□□ -0.6
TOP3A-203ENST00000469739 LRRC24Q50LG9 513 aa11.32□□□□□ -0.6
TOP3A-203ENST00000469739 FAM173BQ6P4H8 233 aa11.32□□□□□ -0.6
TOP3A-203ENST00000469739 TRIM44Q96DX7 344 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-203ENST00000469739 FAM89AQ96GI7 184 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 186.4 ms