RNA–Protein interactions for RNA: ENST00000469672.5

ABCD4-205, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-205ENST00000469672 ARFGEF2Q9Y6D5 1785 aa16.84■□□□□ 0.29
ABCD4-205ENST00000469672 POTECB2RU33 542 aa16.83■□□□□ 0.28
ABCD4-205ENST00000469672 CALD1Q05682 793 aaKnown RBP16.83■□□□□ 0.28
ABCD4-205ENST00000469672 AIMP1Q12904 312 aaKnown RBP16.83■□□□□ 0.28
ABCD4-205ENST00000469672 TCIRG1Q13488 830 aa16.83■□□□□ 0.28
ABCD4-205ENST00000469672 RNF123Q5XPI4 1314 aa16.83■□□□□ 0.28
ABCD4-205ENST00000469672 RPGRQ92834 1020 aaKnown RBP16.83■□□□□ 0.28
ABCD4-205ENST00000469672 CRAMP1Q96RY5 1269 aa16.83■□□□□ 0.28
ABCD4-205ENST00000469672 DBF4Q9UBU7 674 aaPredicted RBP16.83■□□□□ 0.28
ABCD4-205ENST00000469672 TNRC6CQ9HCJ0 1690 aaKnown RBP16.82■□□□□ 0.28
ABCD4-205ENST00000469672 GRIPAP1Q4V328 841 aa16.82■□□□□ 0.28
ABCD4-205ENST00000469672 HDGFL1Q5TGJ6 251 aa16.82■□□□□ 0.28
ABCD4-205ENST00000469672 SMC1BQ8NDV3 1235 aa16.82■□□□□ 0.28
ABCD4-205ENST00000469672 NLRP3Q96P20 1036 aa16.82■□□□□ 0.28
ABCD4-205ENST00000469672 MBIPQ9NS73 344 aa16.82■□□□□ 0.28
ABCD4-205ENST00000469672 IFT57Q9NWB7 429 aa16.82■□□□□ 0.28
ABCD4-205ENST00000469672 CHPF2Q9P2E5 772 aa16.82■□□□□ 0.28
ABCD4-205ENST00000469672 DICER1Q9UPY3 1922 aaKnown RBP16.82■□□□□ 0.28
ABCD4-205ENST00000469672 GNAI1P63096 354 aa16.81■□□□□ 0.28
ABCD4-205ENST00000469672 DUSP27Q5VZP5 1158 aa16.81■□□□□ 0.28
ABCD4-205ENST00000469672 OLFM4Q6UX06 510 aa16.81■□□□□ 0.28
ABCD4-205ENST00000469672 NLRP10Q86W26 655 aa16.81■□□□□ 0.28
ABCD4-205ENST00000469672 RBM17Q96I25 401 aaKnown RBP16.81■□□□□ 0.28
ABCD4-205ENST00000469672 SYNE4Q8N205 404 aa16.8■□□□□ 0.28
ABCD4-205ENST00000469672 DNAJC5GQ8N7S2 189 aa16.8■□□□□ 0.28
ABCD4-205ENST00000469672 PLBD2Q8NHP8 589 aa16.8■□□□□ 0.28
ABCD4-205ENST00000469672 PSMD1Q99460 953 aa16.8■□□□□ 0.28
ABCD4-205ENST00000469672 ZNF277Q9NRM2 450 aaPredicted RBP16.8■□□□□ 0.28
ABCD4-205ENST00000469672 HYPKQ9NX55 129 aa16.8■□□□□ 0.28
ABCD4-205ENST00000469672 DDNO94850 711 aaPredicted RBP16.79■□□□□ 0.28
ABCD4-205ENST00000469672 ANKRD13DQ6ZTN6 518 aa16.79■□□□□ 0.28
ABCD4-205ENST00000469672 CACNA1SQ13698 1873 aa16.79■□□□□ 0.28
ABCD4-205ENST00000469672 TIAM2Q8IVF5 1701 aa16.79■□□□□ 0.28
ABCD4-205ENST00000469672 CCDC184Q52MB2 194 aa16.78■□□□□ 0.28
ABCD4-205ENST00000469672 C3orf67Q6ZVT6 689 aa16.78■□□□□ 0.28
ABCD4-205ENST00000469672 WDR90Q96KV7 1748 aa16.78■□□□□ 0.28
ABCD4-205ENST00000469672 SNED1Q8TER0 1413 aa16.78■□□□□ 0.28
ABCD4-205ENST00000469672 ZNF316A6NFI3 1004 aaPredicted RBP16.77■□□□□ 0.28
ABCD4-205ENST00000469672 IARSP41252 1262 aaKnown RBP16.77■□□□□ 0.28
ABCD4-205ENST00000469672 L3MBTL3Q96JM7 780 aaPredicted RBP16.77■□□□□ 0.28
ABCD4-205ENST00000469672 CHMP4AQ9BY43 222 aa16.77■□□□□ 0.28
ABCD4-205ENST00000469672 TRMT112Q9UI30 125 aaKnown RBP16.77■□□□□ 0.28
ABCD4-205ENST00000469672 SH3TC1Q8TE82 1336 aa16.76■□□□□ 0.27
ABCD4-205ENST00000469672 FZD9O00144 591 aa16.76■□□□□ 0.27
ABCD4-205ENST00000469672 TRIM28Q13263 835 aaKnown RBP16.76■□□□□ 0.27
ABCD4-205ENST00000469672 CCDC27Q2M243 656 aa16.76■□□□□ 0.27
ABCD4-205ENST00000469672 ISCA1Q9BUE6 129 aa16.76■□□□□ 0.27
ABCD4-205ENST00000469672 IQCA1LA6NCM1 817 aa16.75■□□□□ 0.27
ABCD4-205ENST00000469672 PPEF1O14829 653 aaPredicted RBP16.75■□□□□ 0.27
ABCD4-205ENST00000469672 BBOX1O75936 387 aa16.75■□□□□ 0.27
ABCD4-205ENST00000469672 HCLS1P14317 486 aaPredicted RBP16.75■□□□□ 0.27
ABCD4-205ENST00000469672 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
ABCD4-205ENST00000469672 TMX4Q9H1E5 349 aaPredicted RBP16.75■□□□□ 0.27
ABCD4-205ENST00000469672 ATP6V0A2Q9Y487 856 aa16.75■□□□□ 0.27
ABCD4-205ENST00000469672 ELL2O00472 640 aaPredicted RBP16.74■□□□□ 0.27
ABCD4-205ENST00000469672 JDP2Q8WYK2 163 aa16.74■□□□□ 0.27
ABCD4-205ENST00000469672 VPS33BQ9H267 617 aa16.74■□□□□ 0.27
ABCD4-205ENST00000469672 ANP32CO43423 234 aa16.73■□□□□ 0.27
ABCD4-205ENST00000469672 C8orf58Q8NAV2 365 aa16.73■□□□□ 0.27
ABCD4-205ENST00000469672 ABCC4O15439 1325 aa16.72■□□□□ 0.27
ABCD4-205ENST00000469672 ZNF541Q9H0D2 1346 aa16.72■□□□□ 0.27
ABCD4-205ENST00000469672 TCERG1O14776 1098 aaKnown RBP16.72■□□□□ 0.27
ABCD4-205ENST00000469672 CHADLQ6NUI6 762 aa16.72■□□□□ 0.27
ABCD4-205ENST00000469672 WWC1Q8IX03 1113 aa16.72■□□□□ 0.27
ABCD4-205ENST00000469672 SP8Q8IXZ3 490 aa16.72■□□□□ 0.27
ABCD4-205ENST00000469672 GPC2Q8N158 579 aa16.72■□□□□ 0.27
ABCD4-205ENST00000469672 TAF1DQ9H5J8 278 aaPredicted RBP16.72■□□□□ 0.27
ABCD4-205ENST00000469672 ATP5J2-PTCD1G3V325 749 aa16.71■□□□□ 0.27
ABCD4-205ENST00000469672 HTRA3P83110 453 aa16.71■□□□□ 0.27
ABCD4-205ENST00000469672 CCDC30Q5VVM6 783 aa16.71■□□□□ 0.27
ABCD4-205ENST00000469672 DDX46Q7L014 1031 aaKnown RBP16.71■□□□□ 0.27
ABCD4-205ENST00000469672 RIC3Q7Z5B4 369 aa16.71■□□□□ 0.27
ABCD4-205ENST00000469672 LARGE2Q8N3Y3 721 aa16.71■□□□□ 0.27
ABCD4-205ENST00000469672 KLRG1Q96E93 195 aa16.71■□□□□ 0.27
ABCD4-205ENST00000469672 RTFDC1Q9BY42 306 aaPredicted RBP16.71■□□□□ 0.27
ABCD4-205ENST00000469672 PHAXQ9H814 394 aaKnown RBP16.71■□□□□ 0.27
ABCD4-205ENST00000469672 MRS2Q9HD23 443 aa16.71■□□□□ 0.27
ABCD4-205ENST00000469672 ANKRD36CQ5JPF3 1778 aa16.7■□□□□ 0.26
ABCD4-205ENST00000469672 EIF6P56537 245 aaKnown RBP16.7■□□□□ 0.26
ABCD4-205ENST00000469672 GOLGA2Q08379 1002 aa16.7■□□□□ 0.26
ABCD4-205ENST00000469672 GRAPQ13588 217 aa16.7■□□□□ 0.26
ABCD4-205ENST00000469672 SF3B3Q15393 1217 aaKnown RBP16.7■□□□□ 0.26
ABCD4-205ENST00000469672 TMC4Q7Z404 712 aa16.7■□□□□ 0.26
ABCD4-205ENST00000469672 SUPT20HQ8NEM7 779 aa16.7■□□□□ 0.26
ABCD4-205ENST00000469672 GRAPLQ8TC17 118 aaPredicted RBP16.7■□□□□ 0.26
ABCD4-205ENST00000469672 FAM89AQ96GI7 184 aa16.7■□□□□ 0.26
ABCD4-205ENST00000469672 HACL1Q9UJ83 578 aa16.7■□□□□ 0.26
ABCD4-205ENST00000469672 LDHDQ86WU2 507 aa16.69■□□□□ 0.26
ABCD4-205ENST00000469672 TSPYL6Q8N831 410 aa16.69■□□□□ 0.26
ABCD4-205ENST00000469672 IL16Q14005 1332 aa16.69■□□□□ 0.26
ABCD4-205ENST00000469672 SCN4AP35499 1836 aa16.68■□□□□ 0.26
ABCD4-205ENST00000469672 POTEIP0CG38 1075 aa16.68■□□□□ 0.26
ABCD4-205ENST00000469672 POTEJP0CG39 1038 aa16.68■□□□□ 0.26
ABCD4-205ENST00000469672 SLC51AQ86UW1 340 aa16.68■□□□□ 0.26
ABCD4-205ENST00000469672 PNMA8AQ86V59 439 aaPredicted RBP16.68■□□□□ 0.26
ABCD4-205ENST00000469672 MPNDQ8N594 471 aa16.68■□□□□ 0.26
ABCD4-205ENST00000469672 JMYQ8N9B5 988 aa16.68■□□□□ 0.26
ABCD4-205ENST00000469672 PPIP5K2O43314 1243 aa16.67■□□□□ 0.26
ABCD4-205ENST00000469672 DDX58O95786 925 aaKnown RBP16.67■□□□□ 0.26
ABCD4-205ENST00000469672 HSP90B1P14625 803 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms