RNA–Protein interactions for RNA: ENST00000468704.1

TMEM50A-202, Transcript of transmembrane protein 50A, humanhuman

TSL 3

Gene TMEM50A, Length 799 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-202ENST00000468704 TAOK3Q9H2K8 898 aa22.29■■□□□ 1.16
TMEM50A-202ENST00000468704 PRELPP51888 382 aa22.28■■□□□ 1.16
TMEM50A-202ENST00000468704 HYPKQ9NX55 129 aa22.28■■□□□ 1.16
TMEM50A-202ENST00000468704 SENP3-EIF4A1A0A087X0R7 540 aa22.27■■□□□ 1.16
TMEM50A-202ENST00000468704 ALDH1B1P30837 517 aa22.27■■□□□ 1.16
TMEM50A-202ENST00000468704 CCDC93Q567U6 631 aa22.27■■□□□ 1.16
TMEM50A-202ENST00000468704 RPGRQ92834 1020 aaKnown RBP22.27■■□□□ 1.16
TMEM50A-202ENST00000468704 WDR90Q96KV7 1748 aa22.27■■□□□ 1.16
TMEM50A-202ENST00000468704 UTP14AQ9BVJ6 771 aaKnown RBP22.27■■□□□ 1.16
TMEM50A-202ENST00000468704 NMRK2Q9NPI5 230 aa22.27■■□□□ 1.16
TMEM50A-202ENST00000468704 TAF1P21675 1872 aa22.26■■□□□ 1.15
TMEM50A-202ENST00000468704 NCBP3Q53F19 620 aaKnown RBP22.26■■□□□ 1.15
TMEM50A-202ENST00000468704 PLBD2Q8NHP8 589 aa22.26■■□□□ 1.15
TMEM50A-202ENST00000468704 TCIRG1Q13488 830 aa22.25■■□□□ 1.15
TMEM50A-202ENST00000468704 WWC1Q8IX03 1113 aa22.25■■□□□ 1.15
TMEM50A-202ENST00000468704 C7orf43Q8WVR3 580 aa22.25■■□□□ 1.15
TMEM50A-202ENST00000468704 NLRP10Q86W26 655 aa22.24■■□□□ 1.15
TMEM50A-202ENST00000468704 CHMP4AQ9BY43 222 aa22.24■■□□□ 1.15
TMEM50A-202ENST00000468704 IL16Q14005 1332 aa22.24■■□□□ 1.15
TMEM50A-202ENST00000468704 MYH3P11055 1940 aa22.23■■□□□ 1.15
TMEM50A-202ENST00000468704 ELL2O00472 640 aaPredicted RBP22.23■■□□□ 1.15
TMEM50A-202ENST00000468704 HOXA10P31260 410 aaPredicted RBP22.23■■□□□ 1.15
TMEM50A-202ENST00000468704 ANKRD13DQ6ZTN6 518 aa22.23■■□□□ 1.15
TMEM50A-202ENST00000468704 C8orf58Q8NAV2 365 aa22.23■■□□□ 1.15
TMEM50A-202ENST00000468704 LRRC37AA6NMS7 1700 aa22.22■■□□□ 1.15
TMEM50A-202ENST00000468704 SCN4AP35499 1836 aa22.22■■□□□ 1.15
TMEM50A-202ENST00000468704 SNED1Q8TER0 1413 aa22.22■■□□□ 1.15
TMEM50A-202ENST00000468704 RTKN2Q8IZC4 609 aa22.21■■□□□ 1.15
TMEM50A-202ENST00000468704 TSR2Q969E8 191 aaKnown RBP22.21■■□□□ 1.15
TMEM50A-202ENST00000468704 RBM17Q96I25 401 aaKnown RBP22.21■■□□□ 1.15
TMEM50A-202ENST00000468704 NLRP3Q96P20 1036 aa22.21■■□□□ 1.15
TMEM50A-202ENST00000468704 SH3TC1Q8TE82 1336 aa22.21■■□□□ 1.15
TMEM50A-202ENST00000468704 GLTPD2A6NH11 291 aa22.2■■□□□ 1.14
TMEM50A-202ENST00000468704 TOMM70O94826 608 aa22.2■■□□□ 1.14
TMEM50A-202ENST00000468704 FKBP4Q02790 459 aaKnown RBP eCLIP22.2■■□□□ 1.14
TMEM50A-202ENST00000468704 GOLGA2Q08379 1002 aa22.2■■□□□ 1.14
TMEM50A-202ENST00000468704 SLC10A5Q5PT55 438 aa22.2■■□□□ 1.14
TMEM50A-202ENST00000468704 CCDC30Q5VVM6 783 aa22.2■■□□□ 1.14
TMEM50A-202ENST00000468704 CRAMP1Q96RY5 1269 aa22.2■■□□□ 1.14
TMEM50A-202ENST00000468704 TRMT112Q9UI30 125 aaKnown RBP22.2■■□□□ 1.14
TMEM50A-202ENST00000468704 C3orf67Q6ZVT6 689 aa22.19■■□□□ 1.14
TMEM50A-202ENST00000468704 C16orf71Q8IYS4 520 aaPredicted RBP22.19■■□□□ 1.14
TMEM50A-202ENST00000468704 CC2D2BQ6DHV5 1058 aa22.18■■□□□ 1.14
TMEM50A-202ENST00000468704 OLFM4Q6UX06 510 aa22.18■■□□□ 1.14
TMEM50A-202ENST00000468704 ISCA1Q9BUE6 129 aa22.18■■□□□ 1.14
TMEM50A-202ENST00000468704 PPEF1O14829 653 aaPredicted RBP22.17■■□□□ 1.14
TMEM50A-202ENST00000468704 TSPYL6Q8N831 410 aa22.17■■□□□ 1.14
TMEM50A-202ENST00000468704 PHAXQ9H814 394 aaKnown RBP22.17■■□□□ 1.14
TMEM50A-202ENST00000468704 RRAGCQ9HB90 399 aa22.17■■□□□ 1.14
TMEM50A-202ENST00000468704 DPY19L2Q6NUT2 758 aa22.16■■□□□ 1.14
TMEM50A-202ENST00000468704 RIC3Q7Z5B4 369 aa22.16■■□□□ 1.14
TMEM50A-202ENST00000468704 FAM9BQ8IZU0 186 aa22.16■■□□□ 1.14
TMEM50A-202ENST00000468704 RBM46Q8TBY0 533 aaKnown RBP22.16■■□□□ 1.14
TMEM50A-202ENST00000468704 ABCC4O15439 1325 aa22.15■■□□□ 1.14
TMEM50A-202ENST00000468704 FANCIQ9NVI1 1328 aa22.15■■□□□ 1.14
TMEM50A-202ENST00000468704 ATP5J2-PTCD1G3V325 749 aa22.15■■□□□ 1.14
TMEM50A-202ENST00000468704 DDX58O95786 925 aaKnown RBP22.15■■□□□ 1.14
TMEM50A-202ENST00000468704 HCLS1P14317 486 aaPredicted RBP22.15■■□□□ 1.14
TMEM50A-202ENST00000468704 HSPA6P17066 643 aa22.15■■□□□ 1.14
TMEM50A-202ENST00000468704 GRIPAP1Q4V328 841 aa22.15■■□□□ 1.14
TMEM50A-202ENST00000468704 WDR63Q8IWG1 891 aa22.15■■□□□ 1.14
TMEM50A-202ENST00000468704 PSMD1Q99460 953 aa22.15■■□□□ 1.14
TMEM50A-202ENST00000468704 ZNF277Q9NRM2 450 aaPredicted RBP22.15■■□□□ 1.14
TMEM50A-202ENST00000468704 TRIM28Q13263 835 aaKnown RBP22.14■■□□□ 1.13
TMEM50A-202ENST00000468704 TWISTNBQ3B726 338 aaPredicted RBP22.14■■□□□ 1.13
TMEM50A-202ENST00000468704 SYNE4Q8N205 404 aa22.14■■□□□ 1.13
TMEM50A-202ENST00000468704 STK31Q9BXU1 1019 aa22.14■■□□□ 1.13
TMEM50A-202ENST00000468704 SALL2Q9Y467 1007 aaPredicted RBP22.14■■□□□ 1.13
TMEM50A-202ENST00000468704 VEGFAP15692 232 aaPredicted RBP22.13■■□□□ 1.13
TMEM50A-202ENST00000468704 CEP350Q5VT06 3117 aa22.13■■□□□ 1.13
TMEM50A-202ENST00000468704 SPEF2Q9C093 1822 aa22.13■■□□□ 1.13
TMEM50A-202ENST00000468704 IARSP41252 1262 aaKnown RBP22.12■■□□□ 1.13
TMEM50A-202ENST00000468704 ZNF428Q96B54 188 aa22.12■■□□□ 1.13
TMEM50A-202ENST00000468704 FAM89AQ96GI7 184 aa22.11■■□□□ 1.13
TMEM50A-202ENST00000468704 MYD88Q99836 296 aa22.11■■□□□ 1.13
TMEM50A-202ENST00000468704 TMX4Q9H1E5 349 aaPredicted RBP22.11■■□□□ 1.13
TMEM50A-202ENST00000468704 COL4A5P29400 1685 aa22.11■■□□□ 1.13
TMEM50A-202ENST00000468704 DDX46Q7L014 1031 aaKnown RBP22.1■■□□□ 1.13
TMEM50A-202ENST00000468704 ATP6V0A2Q9Y487 856 aa22.1■■□□□ 1.13
TMEM50A-202ENST00000468704 LTBP1Q14766 1721 aa22.09■■□□□ 1.13
TMEM50A-202ENST00000468704 TCERG1O14776 1098 aaKnown RBP22.09■■□□□ 1.13
TMEM50A-202ENST00000468704 FSTL1Q12841 308 aa22.09■■□□□ 1.13
TMEM50A-202ENST00000468704 METTL22Q9BUU2 404 aaPredicted RBP22.09■■□□□ 1.13
TMEM50A-202ENST00000468704 BBOX1O75936 387 aa22.08■■□□□ 1.13
TMEM50A-202ENST00000468704 GRAPQ13588 217 aa22.08■■□□□ 1.13
TMEM50A-202ENST00000468704 CCDC191Q8NCU4 936 aa22.08■■□□□ 1.13
TMEM50A-202ENST00000468704 GRAPLQ8TC17 118 aaPredicted RBP22.08■■□□□ 1.13
TMEM50A-202ENST00000468704 DUOX1Q9NRD9 1551 aa22.08■■□□□ 1.12
TMEM50A-202ENST00000468704 COL4A1P02462 1669 aa22.07■■□□□ 1.12
TMEM50A-202ENST00000468704 ZNF541Q9H0D2 1346 aa22.07■■□□□ 1.12
TMEM50A-202ENST00000468704 DDNO94850 711 aaPredicted RBP22.07■■□□□ 1.12
TMEM50A-202ENST00000468704 HSP90B1P14625 803 aaKnown RBP22.07■■□□□ 1.12
TMEM50A-202ENST00000468704 RTL5Q5HYW3 569 aaPredicted RBP22.07■■□□□ 1.12
TMEM50A-202ENST00000468704 KSR2Q6VAB6 950 aa22.07■■□□□ 1.12
TMEM50A-202ENST00000468704 TMC4Q7Z404 712 aa22.07■■□□□ 1.12
TMEM50A-202ENST00000468704 SLC51AQ86UW1 340 aa22.07■■□□□ 1.12
TMEM50A-202ENST00000468704 ZBTB38Q8NAP3 1195 aaPredicted RBP22.07■■□□□ 1.12
TMEM50A-202ENST00000468704 SMC1BQ8NDV3 1235 aa22.07■■□□□ 1.12
TMEM50A-202ENST00000468704 CWC25Q9NXE8 425 aaPredicted RBP22.07■■□□□ 1.12
TMEM50A-202ENST00000468704 MAP3K2Q9Y2U5 619 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms