RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 TIAM2Q8IVF5 1701 aa19.6■□□□□ 0.73
ATG4B-215ENST00000468018 SLC10A5Q5PT55 438 aa19.6■□□□□ 0.73
ATG4B-215ENST00000468018 CCDC30Q5VVM6 783 aa19.6■□□□□ 0.73
ATG4B-215ENST00000468018 PPP1R42Q7Z4L9 355 aa19.6■□□□□ 0.73
ATG4B-215ENST00000468018 C7orf43Q8WVR3 580 aa19.6■□□□□ 0.73
ATG4B-215ENST00000468018 ISCA1Q9BUE6 129 aa19.6■□□□□ 0.73
ATG4B-215ENST00000468018 CHMP4AQ9BY43 222 aa19.6■□□□□ 0.73
ATG4B-215ENST00000468018 PHAXQ9H814 394 aaKnown RBP19.6■□□□□ 0.73
ATG4B-215ENST00000468018 NFKBIEO00221 500 aa19.59■□□□□ 0.73
ATG4B-215ENST00000468018 PRELPP51888 382 aa19.59■□□□□ 0.73
ATG4B-215ENST00000468018 TWISTNBQ3B726 338 aaPredicted RBP19.59■□□□□ 0.73
ATG4B-215ENST00000468018 PRPF40BQ6NWY9 871 aaKnown RBP19.59■□□□□ 0.73
ATG4B-215ENST00000468018 SALL2Q9Y467 1007 aaPredicted RBP19.59■□□□□ 0.73
ATG4B-215ENST00000468018 SNED1Q8TER0 1413 aa19.59■□□□□ 0.73
ATG4B-215ENST00000468018 GTF2E1P29083 439 aaPredicted RBP19.58■□□□□ 0.72
ATG4B-215ENST00000468018 UTP14AQ9BVJ6 771 aaKnown RBP19.58■□□□□ 0.72
ATG4B-215ENST00000468018 HOXA10P31260 410 aaPredicted RBP19.57■□□□□ 0.72
ATG4B-215ENST00000468018 TRIM28Q13263 835 aaKnown RBP19.57■□□□□ 0.72
ATG4B-215ENST00000468018 C9orf131Q5VYM1 1079 aa19.57■□□□□ 0.72
ATG4B-215ENST00000468018 LTBP3Q9NS15 1303 aa19.56■□□□□ 0.72
ATG4B-215ENST00000468018 C21orf2O43822 256 aa19.56■□□□□ 0.72
ATG4B-215ENST00000468018 RASSF7Q02833 373 aa19.56■□□□□ 0.72
ATG4B-215ENST00000468018 C3orf67Q6ZVT6 689 aa19.56■□□□□ 0.72
ATG4B-215ENST00000468018 TAF1P21675 1872 aa19.56■□□□□ 0.72
ATG4B-215ENST00000468018 ZC3H4Q9UPT8 1303 aaKnown RBP19.55■□□□□ 0.72
ATG4B-215ENST00000468018 VAMP4O75379 141 aa19.55■□□□□ 0.72
ATG4B-215ENST00000468018 LMNB1P20700 586 aa19.54■□□□□ 0.72
ATG4B-215ENST00000468018 ALDH1B1P30837 517 aa19.54■□□□□ 0.72
ATG4B-215ENST00000468018 SOGA3Q5TF21 947 aa19.54■□□□□ 0.72
ATG4B-215ENST00000468018 SH3TC1Q8TE82 1336 aa19.53■□□□□ 0.72
ATG4B-215ENST00000468018 EXOSC9Q06265 439 aaKnown RBP19.53■□□□□ 0.72
ATG4B-215ENST00000468018 GOLGA2Q08379 1002 aa19.53■□□□□ 0.72
ATG4B-215ENST00000468018 SYNE4Q8N205 404 aa19.53■□□□□ 0.72
ATG4B-215ENST00000468018 RNF181Q9P0P0 153 aa19.53■□□□□ 0.72
ATG4B-215ENST00000468018 ATP5J2-PTCD1G3V325 749 aa19.52■□□□□ 0.72
ATG4B-215ENST00000468018 RIC3Q7Z5B4 369 aa19.52■□□□□ 0.72
ATG4B-215ENST00000468018 NLRP3Q96P20 1036 aa19.52■□□□□ 0.72
ATG4B-215ENST00000468018 CRAMP1Q96RY5 1269 aa19.52■□□□□ 0.72
ATG4B-215ENST00000468018 TRMT112Q9UI30 125 aaKnown RBP19.52■□□□□ 0.72
ATG4B-215ENST00000468018 MYH3P11055 1940 aa19.52■□□□□ 0.72
ATG4B-215ENST00000468018 LRRC37AA6NMS7 1700 aa19.51■□□□□ 0.71
ATG4B-215ENST00000468018 METTL22Q9BUU2 404 aaPredicted RBP19.51■□□□□ 0.71
ATG4B-215ENST00000468018 STK31Q9BXU1 1019 aa19.51■□□□□ 0.71
ATG4B-215ENST00000468018 MYH16Q9H6N6 1097 aa19.51■□□□□ 0.71
ATG4B-215ENST00000468018 GPBP1L1Q9HC44 474 aaPredicted RBP19.51■□□□□ 0.71
ATG4B-215ENST00000468018 CCDC93Q567U6 631 aa19.5■□□□□ 0.71
ATG4B-215ENST00000468018 KSR2Q6VAB6 950 aa19.5■□□□□ 0.71
ATG4B-215ENST00000468018 G2E3Q7L622 706 aa19.5■□□□□ 0.71
ATG4B-215ENST00000468018 TAOK3Q9H2K8 898 aa19.5■□□□□ 0.71
ATG4B-215ENST00000468018 ZNF219Q9P2Y4 722 aaPredicted RBP19.5■□□□□ 0.71
ATG4B-215ENST00000468018 TCERG1O14776 1098 aaKnown RBP19.49■□□□□ 0.71
ATG4B-215ENST00000468018 DDX58O95786 925 aaKnown RBP19.49■□□□□ 0.71
ATG4B-215ENST00000468018 HCLS1P14317 486 aaPredicted RBP19.49■□□□□ 0.71
ATG4B-215ENST00000468018 RPGRQ92834 1020 aaKnown RBP19.49■□□□□ 0.71
ATG4B-215ENST00000468018 RBM17Q96I25 401 aaKnown RBP19.49■□□□□ 0.71
ATG4B-215ENST00000468018 PI4KAP2A4QPH2 592 aa19.48■□□□□ 0.71
ATG4B-215ENST00000468018 SLC4A2P04920 1241 aa19.48■□□□□ 0.71
ATG4B-215ENST00000468018 OLFM4Q6UX06 510 aa19.48■□□□□ 0.71
ATG4B-215ENST00000468018 PI4KAP1Q8N8J0 262 aa19.48■□□□□ 0.71
ATG4B-215ENST00000468018 CCDC191Q8NCU4 936 aa19.48■□□□□ 0.71
ATG4B-215ENST00000468018 MYD88Q99836 296 aa19.48■□□□□ 0.71
ATG4B-215ENST00000468018 MAP3K2Q9Y2U5 619 aa19.48■□□□□ 0.71
ATG4B-215ENST00000468018 COL4A1P02462 1669 aa19.48■□□□□ 0.71
ATG4B-215ENST00000468018 ABCC4O15439 1325 aa19.48■□□□□ 0.71
ATG4B-215ENST00000468018 KIF3CO14782 793 aa19.47■□□□□ 0.71
ATG4B-215ENST00000468018 FLIIQ13045 1269 aa19.47■□□□□ 0.71
ATG4B-215ENST00000468018 DIEXFQ68CQ4 756 aaKnown RBP19.47■□□□□ 0.71
ATG4B-215ENST00000468018 ZBTB38Q8NAP3 1195 aaPredicted RBP19.47■□□□□ 0.71
ATG4B-215ENST00000468018 FAM89AQ96GI7 184 aa19.47■□□□□ 0.71
ATG4B-215ENST00000468018 WDR90Q96KV7 1748 aa19.47■□□□□ 0.71
ATG4B-215ENST00000468018 IGKV5-2P06315 115 aa19.46■□□□□ 0.71
ATG4B-215ENST00000468018 FKBP4Q02790 459 aaKnown RBP eCLIP19.46■□□□□ 0.71
ATG4B-215ENST00000468018 SF3B3Q15393 1217 aaKnown RBP19.46■□□□□ 0.71
ATG4B-215ENST00000468018 CC2D2BQ6DHV5 1058 aa19.46■□□□□ 0.71
ATG4B-215ENST00000468018 RTKN2Q8IZC4 609 aa19.46■□□□□ 0.71
ATG4B-215ENST00000468018 ZNF526Q8TF50 670 aaPredicted RBP19.46■□□□□ 0.71
ATG4B-215ENST00000468018 PCCAP05165 728 aaPredicted RBP19.45■□□□□ 0.7
ATG4B-215ENST00000468018 SLFN5Q08AF3 891 aa19.45■□□□□ 0.7
ATG4B-215ENST00000468018 ZNF428Q96B54 188 aa19.45■□□□□ 0.7
ATG4B-215ENST00000468018 PSMD1Q99460 953 aa19.45■□□□□ 0.7
ATG4B-215ENST00000468018 LTBP1Q14766 1721 aa19.45■□□□□ 0.7
ATG4B-215ENST00000468018 E9PSI1 815 aa19.44■□□□□ 0.7
ATG4B-215ENST00000468018 PPEF1O14829 653 aaPredicted RBP19.44■□□□□ 0.7
ATG4B-215ENST00000468018 C1QTNF8P60827 252 aa19.44■□□□□ 0.7
ATG4B-215ENST00000468018 GRIPAP1Q4V328 841 aa19.44■□□□□ 0.7
ATG4B-215ENST00000468018 SLC51AQ86UW1 340 aa19.44■□□□□ 0.7
ATG4B-215ENST00000468018 TRMT2AQ8IZ69 625 aaKnown RBP19.44■□□□□ 0.7
ATG4B-215ENST00000468018 CWC25Q9NXE8 425 aaPredicted RBP19.44■□□□□ 0.7
ATG4B-215ENST00000468018 IRS4O14654 1257 aaPredicted RBP19.43■□□□□ 0.7
ATG4B-215ENST00000468018 MIER1Q8N108 512 aa19.43■□□□□ 0.7
ATG4B-215ENST00000468018 ATP6V0A2Q9Y487 856 aa19.43■□□□□ 0.7
ATG4B-215ENST00000468018 CDHR2Q9BYE9 1310 aa19.43■□□□□ 0.7
ATG4B-215ENST00000468018 COL4A5P29400 1685 aa19.43■□□□□ 0.7
ATG4B-215ENST00000468018 DUOX1Q9NRD9 1551 aa19.42■□□□□ 0.7
ATG4B-215ENST00000468018 GLTPD2A6NH11 291 aa19.42■□□□□ 0.7
ATG4B-215ENST00000468018 NEURL1BA8MQ27 555 aa19.42■□□□□ 0.7
ATG4B-215ENST00000468018 BBOX1O75936 387 aa19.42■□□□□ 0.7
ATG4B-215ENST00000468018 GRAPQ13588 217 aa19.42■□□□□ 0.7
ATG4B-215ENST00000468018 GRAPLQ8TC17 118 aaPredicted RBP19.42■□□□□ 0.7
ATG4B-215ENST00000468018 NMRK2Q9NPI5 230 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms