RNA–Protein interactions for RNA: ENST00000467931.1

COL1A2-204, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 713 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-204ENST00000467931 RNF123Q5XPI4 1314 aa24.89■■□□□ 1.58
COL1A2-204ENST00000467931 TCERG1O14776 1098 aaKnown RBP24.89■■□□□ 1.58
COL1A2-204ENST00000467931 GIGYF2Q6Y7W6 1299 aaKnown RBP24.89■■□□□ 1.58
COL1A2-204ENST00000467931 TNS4Q8IZW8 715 aa24.89■■□□□ 1.58
COL1A2-204ENST00000467931 RBM17Q96I25 401 aaKnown RBP24.89■■□□□ 1.58
COL1A2-204ENST00000467931 LAMB2P55268 1798 aa24.88■■□□□ 1.57
COL1A2-204ENST00000467931 EPHX2P34913 555 aa24.88■■□□□ 1.57
COL1A2-204ENST00000467931 PPP1R42Q7Z4L9 355 aa24.88■■□□□ 1.57
COL1A2-204ENST00000467931 ZNF34Q8IZ26 560 aa24.88■■□□□ 1.57
COL1A2-204ENST00000467931 PSMD1Q99460 953 aa24.88■■□□□ 1.57
COL1A2-204ENST00000467931 ADAMTSL1Q8N6G6 1762 aa24.88■■□□□ 1.57
COL1A2-204ENST00000467931 FZD9O00144 591 aa24.87■■□□□ 1.57
COL1A2-204ENST00000467931 CAPN15O75808 1086 aa24.87■■□□□ 1.57
COL1A2-204ENST00000467931 NTSR2O95665 410 aa24.87■■□□□ 1.57
COL1A2-204ENST00000467931 LMOD3Q0VAK6 560 aa24.87■■□□□ 1.57
COL1A2-204ENST00000467931 RALBP1Q15311 655 aa24.87■■□□□ 1.57
COL1A2-204ENST00000467931 CC2D2BQ6DHV5 1058 aa24.87■■□□□ 1.57
COL1A2-204ENST00000467931 SNED1Q8TER0 1413 aa24.86■■□□□ 1.57
COL1A2-204ENST00000467931 PPEF1O14829 653 aaPredicted RBP24.86■■□□□ 1.57
COL1A2-204ENST00000467931 ANXA1P04083 346 aa24.86■■□□□ 1.57
COL1A2-204ENST00000467931 EIF6P56537 245 aaKnown RBP24.86■■□□□ 1.57
COL1A2-204ENST00000467931 PARP10Q53GL7 1025 aa24.86■■□□□ 1.57
COL1A2-204ENST00000467931 NECTIN2Q92692 538 aa24.86■■□□□ 1.57
COL1A2-204ENST00000467931 GJA3Q9Y6H8 435 aa24.86■■□□□ 1.57
COL1A2-204ENST00000467931 HOXA10P31260 410 aaPredicted RBP24.85■■□□□ 1.57
COL1A2-204ENST00000467931 GPC2Q8N158 579 aa24.85■■□□□ 1.57
COL1A2-204ENST00000467931 PASKQ96RG2 1323 aa24.85■■□□□ 1.57
COL1A2-204ENST00000467931 COL4A5P29400 1685 aa24.85■■□□□ 1.57
COL1A2-204ENST00000467931 TMPOP42166 694 aaKnown RBP24.84■■□□□ 1.57
COL1A2-204ENST00000467931 NEUROD2Q15784 382 aa24.84■■□□□ 1.57
COL1A2-204ENST00000467931 PNMA8AQ86V59 439 aaPredicted RBP24.84■■□□□ 1.57
COL1A2-204ENST00000467931 LARGE2Q8N3Y3 721 aa24.84■■□□□ 1.57
COL1A2-204ENST00000467931 TMX4Q9H1E5 349 aaPredicted RBP24.84■■□□□ 1.57
COL1A2-204ENST00000467931 PROSER3Q2NL68 480 aa24.83■■□□□ 1.57
COL1A2-204ENST00000467931 C3orf67Q6ZVT6 689 aa24.83■■□□□ 1.57
COL1A2-204ENST00000467931 NLRP3Q96P20 1036 aa24.83■■□□□ 1.57
COL1A2-204ENST00000467931 CRAMP1Q96RY5 1269 aa24.83■■□□□ 1.57
COL1A2-204ENST00000467931 UTP14AQ9BVJ6 771 aaKnown RBP24.83■■□□□ 1.57
COL1A2-204ENST00000467931 CNTNAP1P78357 1384 aa24.82■■□□□ 1.56
COL1A2-204ENST00000467931 LMOD1P29536 600 aaPredicted RBP24.82■■□□□ 1.56
COL1A2-204ENST00000467931 AIMP1Q12904 312 aaKnown RBP24.82■■□□□ 1.56
COL1A2-204ENST00000467931 PDIA6Q15084 440 aa24.82■■□□□ 1.56
COL1A2-204ENST00000467931 GRIPAP1Q4V328 841 aa24.82■■□□□ 1.56
COL1A2-204ENST00000467931 SLC51AQ86UW1 340 aa24.82■■□□□ 1.56
COL1A2-204ENST00000467931 CCDC146Q8IYE0 955 aa24.82■■□□□ 1.56
COL1A2-204ENST00000467931 TMEM88BA6NKF7 163 aa24.81■■□□□ 1.56
COL1A2-204ENST00000467931 BABAM1Q9NWV8 329 aa24.81■■□□□ 1.56
COL1A2-204ENST00000467931 LAS1LQ9Y4W2 734 aaKnown RBP24.81■■□□□ 1.56
COL1A2-204ENST00000467931 LTBP1Q14766 1721 aa24.81■■□□□ 1.56
COL1A2-204ENST00000467931 ITGBL1O95965 494 aaPredicted RBP24.8■■□□□ 1.56
COL1A2-204ENST00000467931 MAP1SQ66K74 1059 aaPredicted RBP24.8■■□□□ 1.56
COL1A2-204ENST00000467931 LRP10Q7Z4F1 713 aa24.8■■□□□ 1.56
COL1A2-204ENST00000467931 TAF1P21675 1872 aa24.79■■□□□ 1.56
COL1A2-204ENST00000467931 NIM1KQ8IY84 436 aa24.79■■□□□ 1.56
COL1A2-204ENST00000467931 MYBBP1AQ9BQG0 1328 aaKnown RBP24.79■■□□□ 1.56
COL1A2-204ENST00000467931 PPIP5K2O43314 1243 aa24.78■■□□□ 1.56
COL1A2-204ENST00000467931 DDX10Q13206 875 aaKnown RBP24.78■■□□□ 1.56
COL1A2-204ENST00000467931 HSP90AB3PQ58FF7 597 aa24.78■■□□□ 1.56
COL1A2-204ENST00000467931 COPS6Q7L5N1 327 aa24.78■■□□□ 1.56
COL1A2-204ENST00000467931 CNTROBQ8N137 903 aa24.78■■□□□ 1.56
COL1A2-204ENST00000467931 XAGE3Q8WTP9 111 aa24.78■■□□□ 1.56
COL1A2-204ENST00000467931 WDR43Q15061 677 aaKnown RBP eCLIP24.77■■□□□ 1.56
COL1A2-204ENST00000467931 ABCC4O15439 1325 aa24.77■■□□□ 1.56
COL1A2-204ENST00000467931 TRPM7Q96QT4 1865 aa24.77■■□□□ 1.56
COL1A2-204ENST00000467931 AOC3Q16853 763 aa24.76■■□□□ 1.55
COL1A2-204ENST00000467931 HCLS1P14317 486 aaPredicted RBP24.75■■□□□ 1.55
COL1A2-204ENST00000467931 VEGFBP49765 207 aa24.75■■□□□ 1.55
COL1A2-204ENST00000467931 KRT24Q2M2I5 525 aa24.75■■□□□ 1.55
COL1A2-204ENST00000467931 ATP6V0A2Q9Y487 856 aa24.75■■□□□ 1.55
COL1A2-204ENST00000467931 SLC10A5Q5PT55 438 aa24.74■■□□□ 1.55
COL1A2-204ENST00000467931 NLRP10Q86W26 655 aa24.74■■□□□ 1.55
COL1A2-204ENST00000467931 AIDAQ96BJ3 306 aa24.74■■□□□ 1.55
COL1A2-204ENST00000467931 TRMT112Q9UI30 125 aaKnown RBP24.74■■□□□ 1.55
COL1A2-204ENST00000467931 DDX60Q8IY21 1712 aaKnown RBP24.74■■□□□ 1.55
COL1A2-204ENST00000467931 EPS15P42566 896 aa24.73■■□□□ 1.55
COL1A2-204ENST00000467931 SCNN1DP51172 638 aa24.73■■□□□ 1.55
COL1A2-204ENST00000467931 SUPT20HQ8NEM7 779 aa24.73■■□□□ 1.55
COL1A2-204ENST00000467931 ZNF428Q96B54 188 aa24.73■■□□□ 1.55
COL1A2-204ENST00000467931 RUNDC1Q96C34 613 aa24.73■■□□□ 1.55
COL1A2-204ENST00000467931 DDX21Q9NR30 783 aaKnown RBP eCLIP24.73■■□□□ 1.55
COL1A2-204ENST00000467931 ABT1Q9ULW3 272 aaKnown RBP24.73■■□□□ 1.55
COL1A2-204ENST00000467931 CHPF2Q9P2E5 772 aa24.72■■□□□ 1.55
COL1A2-204ENST00000467931 SH3TC1Q8TE82 1336 aa24.71■■□□□ 1.55
COL1A2-204ENST00000467931 FOXN1O15353 648 aa24.71■■□□□ 1.55
COL1A2-204ENST00000467931 TCIRG1Q13488 830 aa24.71■■□□□ 1.55
COL1A2-204ENST00000467931 DPP8Q6V1X1 898 aaPredicted RBP24.71■■□□□ 1.55
COL1A2-204ENST00000467931 DDX46Q7L014 1031 aaKnown RBP24.71■■□□□ 1.55
COL1A2-204ENST00000467931 CHL1O00533 1208 aa24.7■■□□□ 1.54
COL1A2-204ENST00000467931 DEFB115Q30KQ5 88 aa24.7■■□□□ 1.54
COL1A2-204ENST00000467931 HDGFL1Q5TGJ6 251 aa24.7■■□□□ 1.54
COL1A2-204ENST00000467931 BBOX1O75936 387 aa24.69■■□□□ 1.54
COL1A2-204ENST00000467931 MPNDQ8N594 471 aa24.69■■□□□ 1.54
COL1A2-204ENST00000467931 VPS33BQ9H267 617 aa24.69■■□□□ 1.54
COL1A2-204ENST00000467931 TRIM35Q9UPQ4 493 aa24.69■■□□□ 1.54
COL1A2-204ENST00000467931 USP50Q70EL3 339 aaPredicted RBP24.68■■□□□ 1.54
COL1A2-204ENST00000467931 SP8Q8IXZ3 490 aa24.68■■□□□ 1.54
COL1A2-204ENST00000467931 ZNRF3Q9ULT6 936 aa24.68■■□□□ 1.54
COL1A2-204ENST00000467931 LRRC37AA6NMS7 1700 aa24.67■■□□□ 1.54
COL1A2-204ENST00000467931 RASSF10A6NK89 507 aa24.67■■□□□ 1.54
COL1A2-204ENST00000467931 GRAPQ13588 217 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms