RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 ROBO2Q9HCK4 1378 aa16.16■□□□□ 0.18
BRAT1-203ENST00000467558 UNC13BO14795 1591 aa16.16■□□□□ 0.18
BRAT1-203ENST00000467558 DZIP3Q86Y13 1208 aaKnown RBP16.16■□□□□ 0.18
BRAT1-203ENST00000467558 POLR3DP05423 398 aaPredicted RBP16.16■□□□□ 0.18
BRAT1-203ENST00000467558 TMX3Q96JJ7 454 aa16.16■□□□□ 0.18
BRAT1-203ENST00000467558 MAP3K11Q16584 847 aa16.16■□□□□ 0.18
BRAT1-203ENST00000467558 TRMT2AQ8IZ69 625 aaKnown RBP16.16■□□□□ 0.18
BRAT1-203ENST00000467558 CDCA7Q9BWT1 371 aaPredicted RBP16.16■□□□□ 0.18
BRAT1-203ENST00000467558 DACH1Q9UI36 760 aa16.16■□□□□ 0.18
BRAT1-203ENST00000467558 SLC12A7Q9Y666 1083 aa16.16■□□□□ 0.18
BRAT1-203ENST00000467558 IFIT3O14879 490 aaKnown RBP16.15■□□□□ 0.18
BRAT1-203ENST00000467558 STX6O43752 255 aa16.15■□□□□ 0.18
BRAT1-203ENST00000467558 LARP6Q9BRS8 491 aaKnown RBP16.15■□□□□ 0.18
BRAT1-203ENST00000467558 CEP57L1Q8IYX8 460 aa16.15■□□□□ 0.18
BRAT1-203ENST00000467558 PDILTQ8N807 584 aa16.15■□□□□ 0.18
BRAT1-203ENST00000467558 CTCFLQ8NI51 663 aaPredicted RBP16.15■□□□□ 0.18
BRAT1-203ENST00000467558 C8orf37Q96NL8 207 aa16.15■□□□□ 0.18
BRAT1-203ENST00000467558 RBM8AQ9Y5S9 174 aaKnown RBP16.15■□□□□ 0.18
BRAT1-203ENST00000467558 TSPOAP1O95153 1857 aa16.15■□□□□ 0.18
BRAT1-203ENST00000467558 GOLGA8BA8MQT2 603 aa16.15■□□□□ 0.18
BRAT1-203ENST00000467558 MCMDC2Q4G0Z9 681 aa16.15■□□□□ 0.18
BRAT1-203ENST00000467558 SLF2Q8IX21 1173 aa16.15■□□□□ 0.18
BRAT1-203ENST00000467558 USP19O94966 1318 aa16.15■□□□□ 0.18
BRAT1-203ENST00000467558 RANBP6O60518 1105 aaKnown RBP16.14■□□□□ 0.17
BRAT1-203ENST00000467558 PLBD2Q8NHP8 589 aa16.14■□□□□ 0.17
BRAT1-203ENST00000467558 NIP7Q9Y221 180 aaKnown RBP eCLIP16.14■□□□□ 0.17
BRAT1-203ENST00000467558 SYCE3A1L190 88 aa16.14■□□□□ 0.17
BRAT1-203ENST00000467558 LDHCP07864 332 aa16.14■□□□□ 0.17
BRAT1-203ENST00000467558 EIF4A1P60842 406 aaKnown RBP16.14■□□□□ 0.17
BRAT1-203ENST00000467558 CCDC70Q6NSX1 233 aa16.14■□□□□ 0.17
BRAT1-203ENST00000467558 ANKRD18AQ8IVF6 992 aa16.14■□□□□ 0.17
BRAT1-203ENST00000467558 METTL22Q9BUU2 404 aaPredicted RBP16.14■□□□□ 0.17
BRAT1-203ENST00000467558 BICC1Q9H694 974 aaKnown RBP16.14■□□□□ 0.17
BRAT1-203ENST00000467558 CEP131Q9UPN4 1083 aa16.14■□□□□ 0.17
BRAT1-203ENST00000467558 LMTK3Q96Q04 1460 aa16.14■□□□□ 0.17
BRAT1-203ENST00000467558 DHX8Q14562 1220 aaKnown RBP16.14■□□□□ 0.17
BRAT1-203ENST00000467558 GOLGA6L1Q8N7Z2 621 aa16.14■□□□□ 0.17
BRAT1-203ENST00000467558 NCOA7Q8NI08 942 aa16.14■□□□□ 0.17
BRAT1-203ENST00000467558 SETDB2Q96T68 719 aa16.14■□□□□ 0.17
BRAT1-203ENST00000467558 ANO8Q9HCE9 1232 aaPredicted RBP16.14■□□□□ 0.17
BRAT1-203ENST00000467558 TMOD2Q9NZR1 351 aa16.14■□□□□ 0.17
BRAT1-203ENST00000467558 GJB2P29033 226 aa16.14■□□□□ 0.17
BRAT1-203ENST00000467558 NLRP3Q96P20 1036 aa16.14■□□□□ 0.17
BRAT1-203ENST00000467558 CLASP1Q7Z460 1538 aa16.14■□□□□ 0.17
BRAT1-203ENST00000467558 ZNF521Q96K83 1311 aa16.13■□□□□ 0.17
BRAT1-203ENST00000467558 BAG4O95429 457 aaKnown RBP16.13■□□□□ 0.17
BRAT1-203ENST00000467558 CCT2P78371 535 aaKnown RBP16.13■□□□□ 0.17
BRAT1-203ENST00000467558 IL17REQ8NFR9 667 aa16.13■□□□□ 0.17
BRAT1-203ENST00000467558 UTP14AQ9BVJ6 771 aaKnown RBP16.13■□□□□ 0.17
BRAT1-203ENST00000467558 HAND2P61296 217 aa16.13■□□□□ 0.17
BRAT1-203ENST00000467558 KIF24Q5T7B8 1368 aa16.12■□□□□ 0.17
BRAT1-203ENST00000467558 A0A0U1RQG5 324 aaPredicted RBP16.12■□□□□ 0.17
BRAT1-203ENST00000467558 BCORL1Q5H9F3 1711 aa16.12■□□□□ 0.17
BRAT1-203ENST00000467558 C6orf229H3BNL8 230 aa16.12■□□□□ 0.17
BRAT1-203ENST00000467558 ZNF444Q8N0Y2 327 aaPredicted RBP16.12■□□□□ 0.17
BRAT1-203ENST00000467558 CROCC2H7BZ55 1655 aa16.12■□□□□ 0.17
BRAT1-203ENST00000467558 SERPINC1P01008 464 aa16.12■□□□□ 0.17
BRAT1-203ENST00000467558 CHMLP26374 656 aa16.12■□□□□ 0.17
BRAT1-203ENST00000467558 SPTY2D1Q68D10 685 aaPredicted RBP16.12■□□□□ 0.17
BRAT1-203ENST00000467558 CCAR1Q8IX12 1150 aaKnown RBP16.12■□□□□ 0.17
BRAT1-203ENST00000467558 GOLGA8AA7E2F4 631 aa16.12■□□□□ 0.17
BRAT1-203ENST00000467558 USP6P35125 1406 aa16.12■□□□□ 0.17
BRAT1-203ENST00000467558 CCDC183Q5T5S1 534 aa16.12■□□□□ 0.17
BRAT1-203ENST00000467558 PAG1Q9NWQ8 432 aa16.12■□□□□ 0.17
BRAT1-203ENST00000467558 USP16Q9Y5T5 823 aa16.12■□□□□ 0.17
BRAT1-203ENST00000467558 IRS4O14654 1257 aaPredicted RBP16.11■□□□□ 0.17
BRAT1-203ENST00000467558 MCM5P33992 734 aa16.11■□□□□ 0.17
BRAT1-203ENST00000467558 STIM1Q13586 685 aa16.11■□□□□ 0.17
BRAT1-203ENST00000467558 DDX17Q92841 729 aaKnown RBP16.11■□□□□ 0.17
BRAT1-203ENST00000467558 MAP3K4Q9Y6R4 1608 aa16.11■□□□□ 0.17
BRAT1-203ENST00000467558 PRR36Q9H6K5 1346 aa16.11■□□□□ 0.17
BRAT1-203ENST00000467558 CLTCL1P53675 1640 aa16.11■□□□□ 0.17
BRAT1-203ENST00000467558 MAGEC2Q9UBF1 373 aaPredicted RBP16.11■□□□□ 0.17
BRAT1-203ENST00000467558 SEC24BO95487 1268 aa16.11■□□□□ 0.17
BRAT1-203ENST00000467558 MFSD6Q6ZSS7 791 aa16.11■□□□□ 0.17
BRAT1-203ENST00000467558 BRF1Q92994 677 aa16.11■□□□□ 0.17
BRAT1-203ENST00000467558 ZNF496Q96IT1 587 aaPredicted RBP16.11■□□□□ 0.17
BRAT1-203ENST00000467558 ABCC4O15439 1325 aa16.11■□□□□ 0.17
BRAT1-203ENST00000467558 BAG3O95817 575 aa16.1■□□□□ 0.17
BRAT1-203ENST00000467558 EPS15P42566 896 aa16.1■□□□□ 0.17
BRAT1-203ENST00000467558 SPC24Q8NBT2 197 aa16.1■□□□□ 0.17
BRAT1-203ENST00000467558 CCDC191Q8NCU4 936 aa16.1■□□□□ 0.17
BRAT1-203ENST00000467558 PIBF1Q8WXW3 757 aa16.1■□□□□ 0.17
BRAT1-203ENST00000467558 KRT18P05783 430 aaKnown RBP16.1■□□□□ 0.17
BRAT1-203ENST00000467558 GUCY1B3Q02153 619 aa16.1■□□□□ 0.17
BRAT1-203ENST00000467558 TFCP2Q12800 502 aa16.1■□□□□ 0.17
BRAT1-203ENST00000467558 NMIQ13287 307 aaPredicted RBP16.1■□□□□ 0.17
BRAT1-203ENST00000467558 TMEM67Q5HYA8 995 aa16.1■□□□□ 0.17
BRAT1-203ENST00000467558 HSP90AA2PQ14568 343 aaPredicted RBP16.1■□□□□ 0.17
BRAT1-203ENST00000467558 CATIPQ7Z7H3 387 aa16.1■□□□□ 0.17
BRAT1-203ENST00000467558 CCDC82Q8N4S0 544 aa16.1■□□□□ 0.17
BRAT1-203ENST00000467558 OFD1O75665 1012 aa16.09■□□□□ 0.17
BRAT1-203ENST00000467558 IARSP41252 1262 aaKnown RBP16.09■□□□□ 0.17
BRAT1-203ENST00000467558 RNF17Q9BXT8 1623 aaKnown RBP16.09■□□□□ 0.17
BRAT1-203ENST00000467558 NPHP4O75161 1426 aaPredicted RBP16.09■□□□□ 0.17
BRAT1-203ENST00000467558 RAD50Q92878 1312 aa16.09■□□□□ 0.17
BRAT1-203ENST00000467558 SLC9C2Q5TAH2 1124 aa16.09■□□□□ 0.17
BRAT1-203ENST00000467558 SSRP1Q08945 709 aaKnown RBP16.09■□□□□ 0.17
BRAT1-203ENST00000467558 ORC3Q9UBD5 711 aaPredicted RBP16.09■□□□□ 0.17
BRAT1-203ENST00000467558 ABCA9Q8IUA7 1624 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms