RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 KRT222Q8N1A0 295 aa21.47■■□□□ 1.03
SNAPC3-205ENST00000467062 RAB11FIP3O75154 756 aa21.47■■□□□ 1.03
SNAPC3-205ENST00000467062 GOLGA6L6A8MZA4 724 aa21.45■■□□□ 1.03
SNAPC3-205ENST00000467062 KDM4AO75164 1064 aa21.45■■□□□ 1.03
SNAPC3-205ENST00000467062 HOXB7P09629 217 aa21.45■■□□□ 1.03
SNAPC3-205ENST00000467062 CPA1P15085 419 aa21.45■■□□□ 1.03
SNAPC3-205ENST00000467062 TEX2Q8IWB9 1127 aa21.45■■□□□ 1.03
SNAPC3-205ENST00000467062 CHD2O14647 1828 aaKnown RBP21.45■■□□□ 1.02
SNAPC3-205ENST00000467062 TPRNQ4KMQ1 711 aa21.45■■□□□ 1.02
SNAPC3-205ENST00000467062 NFATC2IPQ8NCF5 419 aa21.45■■□□□ 1.02
SNAPC3-205ENST00000467062 KLHDC4Q8TBB5 520 aa21.45■■□□□ 1.02
SNAPC3-205ENST00000467062 KIF18AQ8NI77 898 aa21.44■■□□□ 1.02
SNAPC3-205ENST00000467062 DDX54Q8TDD1 881 aaKnown RBP21.44■■□□□ 1.02
SNAPC3-205ENST00000467062 SIL1Q9H173 461 aa21.44■■□□□ 1.02
SNAPC3-205ENST00000467062 SMTNL1A8MU46 457 aa21.44■■□□□ 1.02
SNAPC3-205ENST00000467062 BRD1O95696 1058 aa21.44■■□□□ 1.02
SNAPC3-205ENST00000467062 MAPK8IP2Q13387 824 aaPredicted RBP21.44■■□□□ 1.02
SNAPC3-205ENST00000467062 CHRNA2Q15822 529 aa21.44■■□□□ 1.02
SNAPC3-205ENST00000467062 KSR2Q6VAB6 950 aa21.44■■□□□ 1.02
SNAPC3-205ENST00000467062 RASEFQ8IZ41 740 aa21.44■■□□□ 1.02
SNAPC3-205ENST00000467062 PYCARDQ9ULZ3 195 aa21.43■■□□□ 1.02
SNAPC3-205ENST00000467062 NPHP4O75161 1426 aaPredicted RBP21.43■■□□□ 1.02
SNAPC3-205ENST00000467062 CAPN2P17655 700 aa21.43■■□□□ 1.02
SNAPC3-205ENST00000467062 SUCLG2Q96I99 432 aa21.43■■□□□ 1.02
SNAPC3-205ENST00000467062 PXDNLA1KZ92 1463 aa21.42■■□□□ 1.02
SNAPC3-205ENST00000467062 SGSM2O43147 1006 aa21.42■■□□□ 1.02
SNAPC3-205ENST00000467062 CCDC183Q5T5S1 534 aa21.42■■□□□ 1.02
SNAPC3-205ENST00000467062 KAZALD1Q96I82 304 aa21.42■■□□□ 1.02
SNAPC3-205ENST00000467062 CHMP4AQ9BY43 222 aa21.42■■□□□ 1.02
SNAPC3-205ENST00000467062 GDPD2Q9HCC8 539 aa21.42■■□□□ 1.02
SNAPC3-205ENST00000467062 BICC1Q9H694 974 aaKnown RBP21.41■■□□□ 1.02
SNAPC3-205ENST00000467062 ERBB3P21860 1342 aa21.41■■□□□ 1.02
SNAPC3-205ENST00000467062 HSPA4P34932 840 aa21.41■■□□□ 1.02
SNAPC3-205ENST00000467062 CNTROBQ8N137 903 aa21.41■■□□□ 1.02
SNAPC3-205ENST00000467062 KLHL34Q8N239 644 aa21.41■■□□□ 1.02
SNAPC3-205ENST00000467062 CLASRPQ8N2M8 674 aaKnown RBP21.41■■□□□ 1.02
SNAPC3-205ENST00000467062 TRIM34Q9BYJ4 488 aa21.41■■□□□ 1.02
SNAPC3-205ENST00000467062 CCDC8Q9H0W5 538 aaPredicted RBP21.41■■□□□ 1.02
SNAPC3-205ENST00000467062 KCNF1Q9H3M0 494 aa21.41■■□□□ 1.02
SNAPC3-205ENST00000467062 CSB-PGBD3P0DP91 1061 aa21.4■■□□□ 1.02
SNAPC3-205ENST00000467062 PDIA6Q15084 440 aa21.4■■□□□ 1.02
SNAPC3-205ENST00000467062 RAPGEF4Q8WZA2 1011 aa21.4■■□□□ 1.02
SNAPC3-205ENST00000467062 AACSQ86V21 672 aa21.4■■□□□ 1.02
SNAPC3-205ENST00000467062 ZNF790Q6PG37 636 aa21.39■■□□□ 1.01
SNAPC3-205ENST00000467062 RIC3Q7Z5B4 369 aa21.39■■□□□ 1.01
SNAPC3-205ENST00000467062 ZFP91Q96JP5 570 aaPredicted RBP21.39■■□□□ 1.01
SNAPC3-205ENST00000467062 PAXBP1Q9Y5B6 917 aa21.39■■□□□ 1.01
SNAPC3-205ENST00000467062 SNX14Q9Y5W7 946 aa21.39■■□□□ 1.01
SNAPC3-205ENST00000467062 CHRM1P11229 460 aaPredicted RBP21.39■■□□□ 1.01
SNAPC3-205ENST00000467062 HCLS1P14317 486 aaPredicted RBP21.39■■□□□ 1.01
SNAPC3-205ENST00000467062 ANAPC15P60006 121 aa21.39■■□□□ 1.01
SNAPC3-205ENST00000467062 LSG1Q9H089 658 aaKnown RBP21.39■■□□□ 1.01
SNAPC3-205ENST00000467062 GRM8O00222 908 aa21.38■■□□□ 1.01
SNAPC3-205ENST00000467062 IFIT2P09913 472 aaKnown RBP21.38■■□□□ 1.01
SNAPC3-205ENST00000467062 PTH1RQ03431 593 aa21.38■■□□□ 1.01
SNAPC3-205ENST00000467062 MED1Q15648 1581 aaPredicted RBP21.38■■□□□ 1.01
SNAPC3-205ENST00000467062 TLR7Q9NYK1 1049 aaKnown RBP21.38■■□□□ 1.01
SNAPC3-205ENST00000467062 AOX1Q06278 1338 aa21.38■■□□□ 1.01
SNAPC3-205ENST00000467062 ERICH4A6NGS2 130 aa21.38■■□□□ 1.01
SNAPC3-205ENST00000467062 IGKV5-2P06315 115 aa21.38■■□□□ 1.01
SNAPC3-205ENST00000467062 CUL4AQ13619 759 aa21.38■■□□□ 1.01
SNAPC3-205ENST00000467062 RGS22Q8NE09 1264 aa21.38■■□□□ 1.01
SNAPC3-205ENST00000467062 C19orf44Q9H6X5 657 aa21.38■■□□□ 1.01
SNAPC3-205ENST00000467062 MCM2P49736 904 aa21.37■■□□□ 1.01
SNAPC3-205ENST00000467062 ZNF496Q96IT1 587 aaPredicted RBP21.37■■□□□ 1.01
SNAPC3-205ENST00000467062 HYPKQ9NX55 129 aa21.37■■□□□ 1.01
SNAPC3-205ENST00000467062 USP16Q9Y5T5 823 aa21.37■■□□□ 1.01
SNAPC3-205ENST00000467062 SASH1O94885 1247 aa21.37■■□□□ 1.01
SNAPC3-205ENST00000467062 PLCB2Q00722 1185 aa21.37■■□□□ 1.01
SNAPC3-205ENST00000467062 COPS6Q7L5N1 327 aa21.37■■□□□ 1.01
SNAPC3-205ENST00000467062 ZNF397Q8NF99 534 aaPredicted RBP21.37■■□□□ 1.01
SNAPC3-205ENST00000467062 HSP90AB4PQ58FF6 505 aa21.36■■□□□ 1.01
SNAPC3-205ENST00000467062 XAGE3Q8WTP9 111 aa21.36■■□□□ 1.01
SNAPC3-205ENST00000467062 EAF2Q96CJ1 260 aaPredicted RBP21.36■■□□□ 1.01
SNAPC3-205ENST00000467062 DDX21Q9NR30 783 aaKnown RBP eCLIP21.36■■□□□ 1.01
SNAPC3-205ENST00000467062 CCDC112Q8NEF3 446 aa21.36■■□□□ 1.01
SNAPC3-205ENST00000467062 LINS1Q8NG48 757 aa21.36■■□□□ 1.01
SNAPC3-205ENST00000467062 RAD50Q92878 1312 aa21.36■■□□□ 1.01
SNAPC3-205ENST00000467062 USP54Q70EL1 1684 aa21.35■■□□□ 1.01
SNAPC3-205ENST00000467062 GADD45BO75293 160 aaPredicted RBP21.35■■□□□ 1.01
SNAPC3-205ENST00000467062 ALDH1L1O75891 902 aa21.35■■□□□ 1.01
SNAPC3-205ENST00000467062 GLRX3O76003 335 aaKnown RBP21.35■■□□□ 1.01
SNAPC3-205ENST00000467062 COL9A3Q14050 684 aaPredicted RBP21.35■■□□□ 1.01
SNAPC3-205ENST00000467062 EPHA10Q5JZY3 1008 aa21.35■■□□□ 1.01
SNAPC3-205ENST00000467062 ECHDC1Q9NTX5 307 aa21.35■■□□□ 1.01
SNAPC3-205ENST00000467062 MTX1Q13505 466 aa21.35■■□□□ 1.01
SNAPC3-205ENST00000467062 ADCK5Q3MIX3 580 aa21.35■■□□□ 1.01
SNAPC3-205ENST00000467062 USP48Q86UV5 1035 aa21.35■■□□□ 1.01
SNAPC3-205ENST00000467062 MYD88Q99836 296 aa21.35■■□□□ 1.01
SNAPC3-205ENST00000467062 FAM53CQ9NYF3 392 aa21.35■■□□□ 1.01
SNAPC3-205ENST00000467062 HEG1Q9ULI3 1381 aa21.35■■□□□ 1.01
SNAPC3-205ENST00000467062 AK2P54819 239 aa21.34■■□□□ 1.01
SNAPC3-205ENST00000467062 SLC52A2Q9HAB3 445 aa21.34■■□□□ 1.01
SNAPC3-205ENST00000467062 CACNA1FO60840 1977 aa21.34■■□□□ 1.01
SNAPC3-205ENST00000467062 NPHP3Q7Z494 1330 aa21.34■■□□□ 1.01
SNAPC3-205ENST00000467062 PRPF40BQ6NWY9 871 aaKnown RBP21.34■■□□□ 1.01
SNAPC3-205ENST00000467062 FAM227BQ96M60 508 aa21.34■■□□□ 1.01
SNAPC3-205ENST00000467062 BOLA2Q9H3K6 86 aa21.34■■□□□ 1.01
SNAPC3-205ENST00000467062 EFCC1Q9HA90 598 aa21.34■■□□□ 1.01
SNAPC3-205ENST00000467062 C1orf167Q5SNV9 1468 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms