RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 MED1Q15648 1581 aaPredicted RBP15.46■□□□□ 0.07
PDZRN3-205ENST00000466780 ELP1O95163 1332 aa15.46■□□□□ 0.07
PDZRN3-205ENST00000466780 KCNA6P17658 529 aa15.46■□□□□ 0.07
PDZRN3-205ENST00000466780 CBX1P83916 185 aa15.46■□□□□ 0.07
PDZRN3-205ENST00000466780 EVI5LQ96CN4 794 aa15.46■□□□□ 0.07
PDZRN3-205ENST00000466780 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.46■□□□□ 0.07
PDZRN3-205ENST00000466780 CHD2O14647 1828 aaKnown RBP15.46■□□□□ 0.07
PDZRN3-205ENST00000466780 GOLGA6L6A8MZA4 724 aa15.45■□□□□ 0.06
PDZRN3-205ENST00000466780 ZKSCAN1P17029 563 aaPredicted RBP15.45■□□□□ 0.06
PDZRN3-205ENST00000466780 DMTNQ08495 405 aa15.45■□□□□ 0.06
PDZRN3-205ENST00000466780 ABTB2Q8N961 1025 aa15.45■□□□□ 0.06
PDZRN3-205ENST00000466780 MAP4K1Q92918 833 aa15.45■□□□□ 0.06
PDZRN3-205ENST00000466780 HOXB7P09629 217 aa15.45■□□□□ 0.06
PDZRN3-205ENST00000466780 SLC27A2O14975 620 aa15.45■□□□□ 0.06
PDZRN3-205ENST00000466780 CTIFO43310 598 aaKnown RBP15.45■□□□□ 0.06
PDZRN3-205ENST00000466780 IFIT2P09913 472 aaKnown RBP15.45■□□□□ 0.06
PDZRN3-205ENST00000466780 NMIQ13287 307 aaPredicted RBP15.45■□□□□ 0.06
PDZRN3-205ENST00000466780 CKAP2LQ8IYA6 745 aa15.45■□□□□ 0.06
PDZRN3-205ENST00000466780 ANKRD7Q92527 254 aa15.45■□□□□ 0.06
PDZRN3-205ENST00000466780 TCEANC2Q96MN5 208 aa15.45■□□□□ 0.06
PDZRN3-205ENST00000466780 TAF6LQ9Y6J9 622 aa15.45■□□□□ 0.06
PDZRN3-205ENST00000466780 KDM3BQ7LBC6 1761 aa15.44■□□□□ 0.06
PDZRN3-205ENST00000466780 UTP14CQ5TAP6 766 aaKnown RBP15.44■□□□□ 0.06
PDZRN3-205ENST00000466780 CBX8Q9HC52 389 aa15.44■□□□□ 0.06
PDZRN3-205ENST00000466780 DACT1Q9NYF0 836 aa15.44■□□□□ 0.06
PDZRN3-205ENST00000466780 AACSQ86V21 672 aa15.44■□□□□ 0.06
PDZRN3-205ENST00000466780 LRMPQ12912 555 aa15.43■□□□□ 0.06
PDZRN3-205ENST00000466780 CHAF1AQ13111 956 aaPredicted RBP15.43■□□□□ 0.06
PDZRN3-205ENST00000466780 ANO6Q4KMQ2 910 aa15.43■□□□□ 0.06
PDZRN3-205ENST00000466780 PDCL2Q8N4E4 241 aa15.43■□□□□ 0.06
PDZRN3-205ENST00000466780 GPATCH3Q96I76 525 aa15.43■□□□□ 0.06
PDZRN3-205ENST00000466780 NPHP4O75161 1426 aaPredicted RBP15.43■□□□□ 0.06
PDZRN3-205ENST00000466780 KCNJ4P48050 445 aa15.43■□□□□ 0.06
PDZRN3-205ENST00000466780 CCDC186Q7Z3E2 898 aa15.43■□□□□ 0.06
PDZRN3-205ENST00000466780 TNMDQ9H2S6 317 aa15.43■□□□□ 0.06
PDZRN3-205ENST00000466780 SNRKQ9NRH2 765 aa15.43■□□□□ 0.06
PDZRN3-205ENST00000466780 TFIP11Q9UBB9 837 aaKnown RBP15.43■□□□□ 0.06
PDZRN3-205ENST00000466780 NRBP1Q9UHY1 535 aa15.43■□□□□ 0.06
PDZRN3-205ENST00000466780 LARP1Q6PKG0 1096 aaKnown RBP15.42■□□□□ 0.06
PDZRN3-205ENST00000466780 RBM43Q6ZSC3 357 aaKnown RBP15.42■□□□□ 0.06
PDZRN3-205ENST00000466780 RBM33Q96EV2 1170 aaKnown RBP15.42■□□□□ 0.06
PDZRN3-205ENST00000466780 ZHX1Q9UKY1 873 aaPredicted RBP15.42■□□□□ 0.06
PDZRN3-205ENST00000466780 A0A0D9SFI3 127 aa15.42■□□□□ 0.06
PDZRN3-205ENST00000466780 SASH1O94885 1247 aa15.42■□□□□ 0.06
PDZRN3-205ENST00000466780 TOB2Q14106 344 aaPredicted RBP15.42■□□□□ 0.06
PDZRN3-205ENST00000466780 ERC1Q8IUD2 1116 aa15.42■□□□□ 0.06
PDZRN3-205ENST00000466780 EAF2Q96CJ1 260 aaPredicted RBP15.42■□□□□ 0.06
PDZRN3-205ENST00000466780 MAP3K2Q9Y2U5 619 aa15.42■□□□□ 0.06
PDZRN3-205ENST00000466780 SLIT1O75093 1534 aa15.42■□□□□ 0.06
PDZRN3-205ENST00000466780 ARHGAP23Q9P227 1491 aa15.41■□□□□ 0.06
PDZRN3-205ENST00000466780 PDCP20941 246 aa15.41■□□□□ 0.06
PDZRN3-205ENST00000466780 LEO1Q8WVC0 666 aaPredicted RBP15.41■□□□□ 0.06
PDZRN3-205ENST00000466780 C9orf78Q9NZ63 289 aaPredicted RBP15.41■□□□□ 0.06
PDZRN3-205ENST00000466780 PSMA5P28066 241 aa15.41■□□□□ 0.06
PDZRN3-205ENST00000466780 PROSER3Q2NL68 480 aa15.41■□□□□ 0.06
PDZRN3-205ENST00000466780 CWF19L2Q2TBE0 894 aaKnown RBP15.41■□□□□ 0.06
PDZRN3-205ENST00000466780 BLOC1S2Q6QNY1 142 aa15.41■□□□□ 0.06
PDZRN3-205ENST00000466780 PLA2G4DQ86XP0 818 aa15.41■□□□□ 0.06
PDZRN3-205ENST00000466780 SCAND2PQ9GZW5 306 aaPredicted RBP15.41■□□□□ 0.06
PDZRN3-205ENST00000466780 TLR7Q9NYK1 1049 aaKnown RBP15.41■□□□□ 0.06
PDZRN3-205ENST00000466780 ALDH1L1O75891 902 aa15.4■□□□□ 0.06
PDZRN3-205ENST00000466780 PDIA4P13667 645 aaKnown RBP15.4■□□□□ 0.06
PDZRN3-205ENST00000466780 RPS6KB1P23443 525 aa15.4■□□□□ 0.06
PDZRN3-205ENST00000466780 ZNF75DP51815 510 aa15.4■□□□□ 0.06
PDZRN3-205ENST00000466780 NBPF6Q5VWK0 638 aa15.4■□□□□ 0.06
PDZRN3-205ENST00000466780 KAZALD1Q96I82 304 aa15.4■□□□□ 0.06
PDZRN3-205ENST00000466780 SPATA32Q96LK8 384 aa15.4■□□□□ 0.06
PDZRN3-205ENST00000466780 NBPF4Q96M43 638 aa15.4■□□□□ 0.06
PDZRN3-205ENST00000466780 CLSTN2Q9H4D0 955 aa15.4■□□□□ 0.06
PDZRN3-205ENST00000466780 NPHP3Q7Z494 1330 aa15.4■□□□□ 0.06
PDZRN3-205ENST00000466780 ADGRL3Q9HAR2 1447 aa15.4■□□□□ 0.06
PDZRN3-205ENST00000466780 USP54Q70EL1 1684 aa15.4■□□□□ 0.06
PDZRN3-205ENST00000466780 SPDYE4A6NLX3 237 aa15.4■□□□□ 0.06
PDZRN3-205ENST00000466780 PGBD1Q96JS3 809 aa15.4■□□□□ 0.06
PDZRN3-205ENST00000466780 CCDC8Q9H0W5 538 aaPredicted RBP15.4■□□□□ 0.06
PDZRN3-205ENST00000466780 U2AF2P26368 475 aaKnown RBP eCLIP15.39■□□□□ 0.05
PDZRN3-205ENST00000466780 TDRD7Q8NHU6 1098 aaKnown RBP15.39■□□□□ 0.05
PDZRN3-205ENST00000466780 ALDH8A1Q9H2A2 487 aaPredicted RBP15.39■□□□□ 0.05
PDZRN3-205ENST00000466780 DDX19AQ9NUU7 478 aaKnown RBP15.39■□□□□ 0.05
PDZRN3-205ENST00000466780 DBF4Q9UBU7 674 aaPredicted RBP15.39■□□□□ 0.05
PDZRN3-205ENST00000466780 MED23Q9ULK4 1368 aa15.39■□□□□ 0.05
PDZRN3-205ENST00000466780 BTBD11A6QL63 1104 aa15.39■□□□□ 0.05
PDZRN3-205ENST00000466780 HIP1O00291 1037 aa15.39■□□□□ 0.05
PDZRN3-205ENST00000466780 NR1I2O75469 434 aa15.39■□□□□ 0.05
PDZRN3-205ENST00000466780 ZSCAN25Q6NSZ9 544 aa15.39■□□□□ 0.05
PDZRN3-205ENST00000466780 STK3Q13188 491 aa15.38■□□□□ 0.05
PDZRN3-205ENST00000466780 ANKRD1Q15327 319 aa15.38■□□□□ 0.05
PDZRN3-205ENST00000466780 SUCLG2Q96I99 432 aa15.38■□□□□ 0.05
PDZRN3-205ENST00000466780 TRIM5Q9C035 493 aa15.38■□□□□ 0.05
PDZRN3-205ENST00000466780 GOLGA6L4A6NEF3 574 aa15.38■□□□□ 0.05
PDZRN3-205ENST00000466780 NCBP1Q09161 790 aaKnown RBP15.38■□□□□ 0.05
PDZRN3-205ENST00000466780 KSR2Q6VAB6 950 aa15.38■□□□□ 0.05
PDZRN3-205ENST00000466780 ZNF589Q86UQ0 364 aaPredicted RBP15.38■□□□□ 0.05
PDZRN3-205ENST00000466780 C16orf45Q96MC5 204 aaPredicted RBP15.38■□□□□ 0.05
PDZRN3-205ENST00000466780 CHMP4AQ9BY43 222 aa15.38■□□□□ 0.05
PDZRN3-205ENST00000466780 BOLA2Q9H3K6 86 aa15.38■□□□□ 0.05
PDZRN3-205ENST00000466780 DRC7Q8IY82 874 aa15.37■□□□□ 0.05
PDZRN3-205ENST00000466780 DNAJC25Q9H1X3 360 aa15.37■□□□□ 0.05
PDZRN3-205ENST00000466780 JCADQ9P266 1359 aa15.37■□□□□ 0.05
PDZRN3-205ENST00000466780 JAK2O60674 1132 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms