RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.7□□□□□ -1.18
SIK3-207ENST00000465421 NCKAP5LQ9HCH0 1330 aa7.7□□□□□ -1.18
SIK3-207ENST00000465421 TRIM6-TRIM34B2RNG4 842 aa7.7□□□□□ -1.18
SIK3-207ENST00000465421 NYAP1Q6ZVC0 841 aa7.7□□□□□ -1.18
SIK3-207ENST00000465421 IL25Q9H293 177 aa7.7□□□□□ -1.18
SIK3-207ENST00000465421 NECTIN2Q92692 538 aa7.69□□□□□ -1.18
SIK3-207ENST00000465421 MEIS3Q99687 375 aa7.69□□□□□ -1.18
SIK3-207ENST00000465421 ST7Q9NRC1 585 aa7.69□□□□□ -1.18
SIK3-207ENST00000465421 COL18A1P39060 1754 aa7.69□□□□□ -1.18
SIK3-207ENST00000465421 ZNF75DP51815 510 aa7.69□□□□□ -1.18
SIK3-207ENST00000465421 RBM43Q6ZSC3 357 aaKnown RBP7.69□□□□□ -1.18
SIK3-207ENST00000465421 BABAM1Q9NWV8 329 aa7.69□□□□□ -1.18
SIK3-207ENST00000465421 PARP4Q9UKK3 1724 aaKnown RBP7.69□□□□□ -1.18
SIK3-207ENST00000465421 FIBPO43427 364 aa7.69□□□□□ -1.18
SIK3-207ENST00000465421 CEP135Q66GS9 1140 aa7.69□□□□□ -1.18
SIK3-207ENST00000465421 LUZP1Q86V48 1076 aa7.69□□□□□ -1.18
SIK3-207ENST00000465421 CACTINQ8WUQ7 758 aaKnown RBP7.69□□□□□ -1.18
SIK3-207ENST00000465421 ANO2Q9NQ90 1003 aa7.69□□□□□ -1.18
SIK3-207ENST00000465421 ZNF215Q9UL58 517 aaPredicted RBP7.69□□□□□ -1.18
SIK3-207ENST00000465421 MAP4K4O95819 1239 aaPredicted RBP7.68□□□□□ -1.18
SIK3-207ENST00000465421 CDC25BP30305 580 aa7.68□□□□□ -1.18
SIK3-207ENST00000465421 TYRO3Q06418 890 aa7.68□□□□□ -1.18
SIK3-207ENST00000465421 TDRD7Q8NHU6 1098 aaKnown RBP7.68□□□□□ -1.18
SIK3-207ENST00000465421 DDX54Q8TDD1 881 aaKnown RBP7.68□□□□□ -1.18
SIK3-207ENST00000465421 FEZ2Q9UHY8 353 aaPredicted RBP7.68□□□□□ -1.18
SIK3-207ENST00000465421 DNM1Q05193 864 aaKnown RBP7.68□□□□□ -1.18
SIK3-207ENST00000465421 CCDC144BQ3MJ40 725 aa7.68□□□□□ -1.18
SIK3-207ENST00000465421 RUFY3Q7L099 469 aa7.68□□□□□ -1.18
SIK3-207ENST00000465421 CCDC144CPQ8IYA2 1237 aa7.68□□□□□ -1.18
SIK3-207ENST00000465421 TSPYL1Q9H0U9 437 aa7.68□□□□□ -1.18
SIK3-207ENST00000465421 CBX8Q9HC52 389 aa7.68□□□□□ -1.18
SIK3-207ENST00000465421 KCND1Q9NSA2 647 aa7.68□□□□□ -1.18
SIK3-207ENST00000465421 MIS18AQ9NYP9 233 aa7.68□□□□□ -1.18
SIK3-207ENST00000465421 STAP2Q9UGK3 403 aa7.68□□□□□ -1.18
SIK3-207ENST00000465421 MTMR6Q9Y217 621 aa7.68□□□□□ -1.18
SIK3-207ENST00000465421 ATP6V1DQ9Y5K8 247 aa7.68□□□□□ -1.18
SIK3-207ENST00000465421 RAD50Q92878 1312 aa7.68□□□□□ -1.18
SIK3-207ENST00000465421 STRCP1A6NGW2 1772 aa7.68□□□□□ -1.18
SIK3-207ENST00000465421 USP27XA6NNY8 438 aa7.68□□□□□ -1.18
SIK3-207ENST00000465421 H2AFXP16104 143 aaPredicted RBP7.68□□□□□ -1.18
SIK3-207ENST00000465421 ERO1AQ96HE7 468 aa7.68□□□□□ -1.18
SIK3-207ENST00000465421 PTPRCP08575 1304 aa7.68□□□□□ -1.18
SIK3-207ENST00000465421 ERICH4A6NGS2 130 aa7.67□□□□□ -1.18
SIK3-207ENST00000465421 HNRNPH2P55795 449 aaKnown RBP7.67□□□□□ -1.18
SIK3-207ENST00000465421 PKD1L3Q7Z443 1732 aa7.67□□□□□ -1.18
SIK3-207ENST00000465421 UNC5CLQ8IV45 518 aa7.67□□□□□ -1.18
SIK3-207ENST00000465421 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.67□□□□□ -1.18
SIK3-207ENST00000465421 FHOD1Q9Y613 1164 aa7.67□□□□□ -1.18
SIK3-207ENST00000465421 MAP3K19Q56UN5 1328 aa7.67□□□□□ -1.18
SIK3-207ENST00000465421 CCDC171Q6TFL3 1326 aa7.67□□□□□ -1.18
SIK3-207ENST00000465421 MAFGO15525 162 aa7.67□□□□□ -1.18
SIK3-207ENST00000465421 AK2P54819 239 aa7.67□□□□□ -1.18
SIK3-207ENST00000465421 TPD52L1Q16890 204 aaPredicted RBP7.67□□□□□ -1.18
SIK3-207ENST00000465421 NFATC2IPQ8NCF5 419 aa7.67□□□□□ -1.18
SIK3-207ENST00000465421 RGS22Q8NE09 1264 aa7.67□□□□□ -1.18
SIK3-207ENST00000465421 SLC26A8Q96RN1 970 aa7.67□□□□□ -1.18
SIK3-207ENST00000465421 EXOC6BQ9Y2D4 811 aa7.67□□□□□ -1.18
SIK3-207ENST00000465421 ELP1O95163 1332 aa7.66□□□□□ -1.18
SIK3-207ENST00000465421 PSEN1P49768 467 aa7.66□□□□□ -1.18
SIK3-207ENST00000465421 RRS1Q15050 365 aaKnown RBP7.66□□□□□ -1.18
SIK3-207ENST00000465421 ELF2Q15723 593 aa7.66□□□□□ -1.18
SIK3-207ENST00000465421 MAP3K11Q16584 847 aa7.66□□□□□ -1.18
SIK3-207ENST00000465421 SNX14Q9Y5W7 946 aa7.66□□□□□ -1.18
SIK3-207ENST00000465421 SCN11AQ9UI33 1791 aa7.66□□□□□ -1.18
SIK3-207ENST00000465421 HMMRO75330 724 aa7.66□□□□□ -1.18
SIK3-207ENST00000465421 ANO6Q4KMQ2 910 aa7.66□□□□□ -1.18
SIK3-207ENST00000465421 LRRC8AQ8IWT6 810 aa7.66□□□□□ -1.18
SIK3-207ENST00000465421 CNPY4Q8N129 248 aa7.66□□□□□ -1.18
SIK3-207ENST00000465421 LIMCH1Q9UPQ0 1083 aa7.66□□□□□ -1.18
SIK3-207ENST00000465421 XIRP1Q702N8 1843 aaKnown RBP7.66□□□□□ -1.18
SIK3-207ENST00000465421 F6X3S4 739 aa7.66□□□□□ -1.18
SIK3-207ENST00000465421 LARGE1O95461 756 aa7.66□□□□□ -1.18
SIK3-207ENST00000465421 LIG1P18858 919 aa7.66□□□□□ -1.18
SIK3-207ENST00000465421 SETQ01105 290 aaPredicted RBP7.66□□□□□ -1.18
SIK3-207ENST00000465421 RAD51AP2Q09MP3 1159 aa7.66□□□□□ -1.18
SIK3-207ENST00000465421 TTC6Q86TZ1 520 aa7.66□□□□□ -1.18
SIK3-207ENST00000465421 NOL10Q9BSC4 688 aaKnown RBP7.66□□□□□ -1.18
SIK3-207ENST00000465421 TRIM34Q9BYJ4 488 aa7.66□□□□□ -1.18
SIK3-207ENST00000465421 AOX1Q06278 1338 aa7.65□□□□□ -1.18
SIK3-207ENST00000465421 NUTM2FA1L443 756 aa7.65□□□□□ -1.18
SIK3-207ENST00000465421 ST3GAL1Q11201 340 aa7.65□□□□□ -1.18
SIK3-207ENST00000465421 ZNF592Q92610 1267 aa7.65□□□□□ -1.18
SIK3-207ENST00000465421 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.65□□□□□ -1.18
SIK3-207ENST00000465421 V9GYY5 206 aaPredicted RBP7.65□□□□□ -1.18
SIK3-207ENST00000465421 CEMIPQ8WUJ3 1361 aa7.65□□□□□ -1.18
SIK3-207ENST00000465421 NPHP1O15259 732 aa7.65□□□□□ -1.18
SIK3-207ENST00000465421 SARM1Q6SZW1 724 aa7.65□□□□□ -1.18
SIK3-207ENST00000465421 DRC7Q8IY82 874 aa7.65□□□□□ -1.18
SIK3-207ENST00000465421 NUP62CLQ9H1M0 184 aa7.65□□□□□ -1.18
SIK3-207ENST00000465421 L2HGDHQ9H9P8 463 aa7.65□□□□□ -1.18
SIK3-207ENST00000465421 CLIP2Q9UDT6 1046 aa7.65□□□□□ -1.18
SIK3-207ENST00000465421 GJB2P29033 226 aa7.65□□□□□ -1.19
SIK3-207ENST00000465421 PLA2G4AP47712 749 aa7.65□□□□□ -1.19
SIK3-207ENST00000465421 CCZ1BP86790 482 aa7.65□□□□□ -1.19
SIK3-207ENST00000465421 CCZ1P86791 482 aaPredicted RBP7.65□□□□□ -1.19
SIK3-207ENST00000465421 BMS1Q14692 1282 aaKnown RBP7.65□□□□□ -1.19
SIK3-207ENST00000465421 MUM1L1Q5H9M0 696 aa7.65□□□□□ -1.19
SIK3-207ENST00000465421 RNF20Q5VTR2 975 aa7.65□□□□□ -1.19
SIK3-207ENST00000465421 RASEFQ8IZ41 740 aa7.65□□□□□ -1.19
SIK3-207ENST00000465421 UBXN6Q9BZV1 441 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms