RNA–Protein interactions for RNA: ENST00000464787.1

UBP1-206, Transcript of upstream binding protein 1, humanhuman

TSL 3

Gene UBP1, Length 536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-206ENST00000464787 CNGB1Q14028 1251 aaPredicted RBP7.23□□□□□ -1.25
UBP1-206ENST00000464787 EZH2Q15910 746 aaKnown RBP7.23□□□□□ -1.25
UBP1-206ENST00000464787 CC2D1BQ5T0F9 858 aaKnown RBP7.23□□□□□ -1.25
UBP1-206ENST00000464787 MORC1Q86VD1 984 aa7.23□□□□□ -1.25
UBP1-206ENST00000464787 TRAIPQ9BWF2 469 aa7.23□□□□□ -1.25
UBP1-206ENST00000464787 OVOS2A0A0G2JMS6 1433 aa7.23□□□□□ -1.25
UBP1-206ENST00000464787 SHANK3Q9BYB0 1731 aa7.23□□□□□ -1.25
UBP1-206ENST00000464787 SPTLC1O15269 473 aa7.22□□□□□ -1.25
UBP1-206ENST00000464787 APBA3O96018 575 aa7.22□□□□□ -1.25
UBP1-206ENST00000464787 SF3B2Q13435 895 aaKnown RBP7.22□□□□□ -1.25
UBP1-206ENST00000464787 EIF4A2Q14240 407 aaKnown RBP7.22□□□□□ -1.25
UBP1-206ENST00000464787 TUSC1Q2TAM9 212 aa7.22□□□□□ -1.25
UBP1-206ENST00000464787 PACS2Q86VP3 889 aa7.22□□□□□ -1.25
UBP1-206ENST00000464787 ACSBG1Q96GR2 724 aa7.22□□□□□ -1.25
UBP1-206ENST00000464787 CAMKK2Q96RR4 588 aa7.22□□□□□ -1.25
UBP1-206ENST00000464787 EYA1Q99502 592 aa7.22□□□□□ -1.25
UBP1-206ENST00000464787 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.22□□□□□ -1.25
UBP1-206ENST00000464787 BCL9O00512 1426 aa7.21□□□□□ -1.25
UBP1-206ENST00000464787 NCAPD2Q15021 1401 aa7.21□□□□□ -1.25
UBP1-206ENST00000464787 SMG6Q86US8 1419 aaKnown RBP7.21□□□□□ -1.25
UBP1-206ENST00000464787 NBPF26B4DH59 902 aa7.21□□□□□ -1.26
UBP1-206ENST00000464787 SMAPO00193 183 aa7.21□□□□□ -1.26
UBP1-206ENST00000464787 CD46P15529 392 aa7.21□□□□□ -1.26
UBP1-206ENST00000464787 DNAJB2P25686 324 aa7.21□□□□□ -1.26
UBP1-206ENST00000464787 BAG6P46379 1132 aa7.21□□□□□ -1.26
UBP1-206ENST00000464787 RDH13Q8NBN7 331 aa7.21□□□□□ -1.26
UBP1-206ENST00000464787 ZCRB1Q8TBF4 217 aaKnown RBP7.21□□□□□ -1.26
UBP1-206ENST00000464787 DDX54Q8TDD1 881 aaKnown RBP7.21□□□□□ -1.26
UBP1-206ENST00000464787 TSKSQ9UJT2 592 aa7.21□□□□□ -1.26
UBP1-206ENST00000464787 LCE2BO14633 110 aa7.2□□□□□ -1.26
UBP1-206ENST00000464787 RSBN1LQ6PCB5 846 aaPredicted RBP7.2□□□□□ -1.26
UBP1-206ENST00000464787 NUDT18Q6ZVK8 323 aa7.2□□□□□ -1.26
UBP1-206ENST00000464787 NECTIN2Q92692 538 aa7.2□□□□□ -1.26
UBP1-206ENST00000464787 LRCH3Q96II8 777 aa7.2□□□□□ -1.26
UBP1-206ENST00000464787 TSR3Q9UJK0 312 aaKnown RBP7.2□□□□□ -1.26
UBP1-206ENST00000464787 MOXD2PA6NHM9 499 aa7.19□□□□□ -1.26
UBP1-206ENST00000464787 CYP27B1O15528 508 aa7.19□□□□□ -1.26
UBP1-206ENST00000464787 GJA5P36382 358 aa7.19□□□□□ -1.26
UBP1-206ENST00000464787 MTHFSP49914 203 aa7.19□□□□□ -1.26
UBP1-206ENST00000464787 RAPGEF4Q8WZA2 1011 aa7.19□□□□□ -1.26
UBP1-206ENST00000464787 PNMA3Q9UL41 463 aa7.19□□□□□ -1.26
UBP1-206ENST00000464787 NPC1L1Q9UHC9 1359 aa7.19□□□□□ -1.26
UBP1-206ENST00000464787 NHSQ6T4R5 1651 aa7.19□□□□□ -1.26
UBP1-206ENST00000464787 RREB1Q92766 1687 aa7.19□□□□□ -1.26
UBP1-206ENST00000464787 BTAF1O14981 1849 aa7.18□□□□□ -1.26
UBP1-206ENST00000464787 C3orf80F5H4A9 247 aa7.18□□□□□ -1.26
UBP1-206ENST00000464787 TATP17735 454 aaPredicted RBP7.18□□□□□ -1.26
UBP1-206ENST00000464787 IL13P35225 146 aa7.18□□□□□ -1.26
UBP1-206ENST00000464787 NYAP1Q6ZVC0 841 aa7.18□□□□□ -1.26
UBP1-206ENST00000464787 MTMR14Q8NCE2 650 aa7.18□□□□□ -1.26
UBP1-206ENST00000464787 IGSF1Q8N6C5 1336 aa7.18□□□□□ -1.26
UBP1-206ENST00000464787 NUP188Q5SRE5 1749 aa7.18□□□□□ -1.26
UBP1-206ENST00000464787 PKD1L3Q7Z443 1732 aa7.18□□□□□ -1.26
UBP1-206ENST00000464787 DOT1LQ8TEK3 1739 aa7.18□□□□□ -1.26
UBP1-206ENST00000464787 PLSCR1O15162 318 aa7.17□□□□□ -1.26
UBP1-206ENST00000464787 NDUFV2P19404 249 aa7.17□□□□□ -1.26
UBP1-206ENST00000464787 R3HDM1Q15032 1099 aaKnown RBP7.17□□□□□ -1.26
UBP1-206ENST00000464787 TATDN2Q93075 761 aa7.17□□□□□ -1.26
UBP1-206ENST00000464787 FAM198AQ9UFP1 575 aa7.17□□□□□ -1.26
UBP1-206ENST00000464787 TOGARAM1Q9Y4F4 1720 aa7.17□□□□□ -1.26
UBP1-206ENST00000464787 COL3A1P02461 1466 aaPredicted RBP7.17□□□□□ -1.26
UBP1-206ENST00000464787 RGPD3A6NKT7 1758 aaPredicted RBP7.16□□□□□ -1.26
UBP1-206ENST00000464787 RGPD4Q7Z3J3 1758 aa7.16□□□□□ -1.26
UBP1-206ENST00000464787 LILRB3O75022 631 aa7.16□□□□□ -1.26
UBP1-206ENST00000464787 KDM4AO75164 1064 aa7.16□□□□□ -1.26
UBP1-206ENST00000464787 TXNRD1Q16881 649 aa7.16□□□□□ -1.26
UBP1-206ENST00000464787 PRPF38BQ5VTL8 546 aaKnown RBP7.16□□□□□ -1.26
UBP1-206ENST00000464787 SAMD7Q7Z3H4 446 aa7.16□□□□□ -1.26
UBP1-206ENST00000464787 RETREG2Q8NC44 543 aa7.16□□□□□ -1.26
UBP1-206ENST00000464787 GLMNQ92990 594 aa7.16□□□□□ -1.26
UBP1-206ENST00000464787 SYTL4Q96C24 671 aaPredicted RBP7.16□□□□□ -1.26
UBP1-206ENST00000464787 ZBTB3Q9H5J0 574 aa7.16□□□□□ -1.26
UBP1-206ENST00000464787 TBC1D2BQ9UPU7 963 aa7.16□□□□□ -1.26
UBP1-206ENST00000464787 PCDH11XQ9BZA7 1347 aa7.16□□□□□ -1.26
UBP1-206ENST00000464787 PCDH11YQ9BZA8 1340 aa7.16□□□□□ -1.26
UBP1-206ENST00000464787 UTRNP46939 3433 aa7.16□□□□□ -1.26
UBP1-206ENST00000464787 PARD3Q8TEW0 1356 aa7.16□□□□□ -1.26
UBP1-206ENST00000464787 GFRA3O60609 400 aa7.15□□□□□ -1.26
UBP1-206ENST00000464787 USP17L8P0C7I0 530 aa7.15□□□□□ -1.26
UBP1-206ENST00000464787 PPP2R1AP30153 589 aa7.15□□□□□ -1.26
UBP1-206ENST00000464787 SLC4A3P48751 1232 aa7.15□□□□□ -1.26
UBP1-206ENST00000464787 KCNQ4P56696 695 aa7.15□□□□□ -1.26
UBP1-206ENST00000464787 PPP4CP60510 307 aa7.15□□□□□ -1.26
UBP1-206ENST00000464787 USP46P62068 366 aa7.15□□□□□ -1.26
UBP1-206ENST00000464787 DDX10Q13206 875 aaKnown RBP7.15□□□□□ -1.26
UBP1-206ENST00000464787 QPCTQ16769 361 aa7.15□□□□□ -1.26
UBP1-206ENST00000464787 RTL5Q5HYW3 569 aaPredicted RBP7.15□□□□□ -1.26
UBP1-206ENST00000464787 SULT6B1Q6IMI4 303 aa7.15□□□□□ -1.26
UBP1-206ENST00000464787 TMEM134Q9H6X4 195 aa7.15□□□□□ -1.26
UBP1-206ENST00000464787 LRRC4BQ9NT99 713 aa7.15□□□□□ -1.26
UBP1-206ENST00000464787 NDUFB9Q9Y6M9 179 aa7.15□□□□□ -1.26
UBP1-206ENST00000464787 KDRP35968 1356 aa7.15□□□□□ -1.26
UBP1-206ENST00000464787 ITGB4P16144 1822 aa7.15□□□□□ -1.27
UBP1-206ENST00000464787 DIAPH1O60610 1272 aaKnown RBP7.14□□□□□ -1.27
UBP1-206ENST00000464787 HMOX1P09601 288 aa7.14□□□□□ -1.27
UBP1-206ENST00000464787 PHKG2P15735 406 aa7.14□□□□□ -1.27
UBP1-206ENST00000464787 WASHC4Q2M389 1173 aa7.14□□□□□ -1.27
UBP1-206ENST00000464787 TSC1Q92574 1164 aa7.14□□□□□ -1.27
UBP1-206ENST00000464787 PDGFDQ9GZP0 370 aaPredicted RBP7.14□□□□□ -1.27
UBP1-206ENST00000464787 SPG7Q9UQ90 795 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms