RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 TNS1Q9HBL0 1735 aaKnown RBP19.22■□□□□ 0.67
GYPC-205ENST00000464053 APBA3O96018 575 aa19.22■□□□□ 0.67
GYPC-205ENST00000464053 SLC27A3Q5K4L6 730 aa19.22■□□□□ 0.67
GYPC-205ENST00000464053 ZNF34Q8IZ26 560 aa19.22■□□□□ 0.67
GYPC-205ENST00000464053 APBB1O00213 710 aa19.21■□□□□ 0.67
GYPC-205ENST00000464053 TXNRD1Q16881 649 aa19.21■□□□□ 0.67
GYPC-205ENST00000464053 RTCBQ9Y3I0 505 aaKnown RBP19.21■□□□□ 0.67
GYPC-205ENST00000464053 ILDR1Q86SU0 546 aaPredicted RBP19.2■□□□□ 0.66
GYPC-205ENST00000464053 SYNE4Q8N205 404 aa19.2■□□□□ 0.66
GYPC-205ENST00000464053 FAM89AQ96GI7 184 aa19.2■□□□□ 0.66
GYPC-205ENST00000464053 PLSCR1O15162 318 aa19.19■□□□□ 0.66
GYPC-205ENST00000464053 SMARCA5O60264 1052 aaPredicted RBP19.19■□□□□ 0.66
GYPC-205ENST00000464053 PCCAP05165 728 aaPredicted RBP19.19■□□□□ 0.66
GYPC-205ENST00000464053 FOXO4P98177 505 aa19.19■□□□□ 0.66
GYPC-205ENST00000464053 AK7Q96M32 723 aa19.19■□□□□ 0.66
GYPC-205ENST00000464053 SCN7AQ01118 1682 aa19.19■□□□□ 0.66
GYPC-205ENST00000464053 RABL6Q3YEC7 729 aaPredicted RBP19.18■□□□□ 0.66
GYPC-205ENST00000464053 ZBTB38Q8NAP3 1195 aaPredicted RBP19.18■□□□□ 0.66
GYPC-205ENST00000464053 ARHGEF1Q92888 912 aaKnown RBP19.18■□□□□ 0.66
GYPC-205ENST00000464053 SRP68Q9UHB9 627 aaKnown RBP19.18■□□□□ 0.66
GYPC-205ENST00000464053 C4AP0C0L4 1744 aa19.18■□□□□ 0.66
GYPC-205ENST00000464053 UBR3Q6ZT12 1888 aa19.18■□□□□ 0.66
GYPC-205ENST00000464053 PHF14O94880 888 aa19.18■□□□□ 0.66
GYPC-205ENST00000464053 BCL2L12Q9HB09 334 aa19.18■□□□□ 0.66
GYPC-205ENST00000464053 NARFQ9UHQ1 456 aa19.18■□□□□ 0.66
GYPC-205ENST00000464053 SURF6O75683 361 aaKnown RBP19.17■□□□□ 0.66
GYPC-205ENST00000464053 SUSD4Q5VX71 490 aa19.17■□□□□ 0.66
GYPC-205ENST00000464053 USPL1Q5W0Q7 1092 aa19.17■□□□□ 0.66
GYPC-205ENST00000464053 BCL11AQ9H165 835 aa19.17■□□□□ 0.66
GYPC-205ENST00000464053 PA2G4Q9UQ80 394 aaKnown RBP19.17■□□□□ 0.66
GYPC-205ENST00000464053 LMBR1LQ6UX01 489 aa19.16■□□□□ 0.66
GYPC-205ENST00000464053 CLEC4GQ6UXB4 293 aa19.16■□□□□ 0.66
GYPC-205ENST00000464053 TRMT112Q9UI30 125 aaKnown RBP19.16■□□□□ 0.66
GYPC-205ENST00000464053 NIP7Q9Y221 180 aaKnown RBP eCLIP19.16■□□□□ 0.66
GYPC-205ENST00000464053 C16orf71Q8IYS4 520 aaPredicted RBP19.16■□□□□ 0.66
GYPC-205ENST00000464053 ZNF652Q9Y2D9 606 aa19.16■□□□□ 0.66
GYPC-205ENST00000464053 FAM177BA6PVY3 158 aa19.15■□□□□ 0.66
GYPC-205ENST00000464053 TRAPPC3LQ5T215 181 aa19.15■□□□□ 0.66
GYPC-205ENST00000464053 KLHDC4Q8TBB5 520 aa19.15■□□□□ 0.66
GYPC-205ENST00000464053 NOP58Q9Y2X3 529 aaKnown RBP19.15■□□□□ 0.66
GYPC-205ENST00000464053 RFX5P48382 616 aaPredicted RBP19.14■□□□□ 0.65
GYPC-205ENST00000464053 CDHR2Q9BYE9 1310 aa19.14■□□□□ 0.65
GYPC-205ENST00000464053 ZPR1O75312 459 aa19.14■□□□□ 0.65
GYPC-205ENST00000464053 TBC1D9BQ66K14 1250 aa19.14■□□□□ 0.65
GYPC-205ENST00000464053 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.13■□□□□ 0.65
GYPC-205ENST00000464053 RFC4P35249 363 aa19.13■□□□□ 0.65
GYPC-205ENST00000464053 PARP10Q53GL7 1025 aa19.13■□□□□ 0.65
GYPC-205ENST00000464053 OTUD7AQ8TE49 926 aaPredicted RBP19.13■□□□□ 0.65
GYPC-205ENST00000464053 PLA2G12BQ9BX93 195 aa19.13■□□□□ 0.65
GYPC-205ENST00000464053 LRRCC1Q9C099 1032 aa19.13■□□□□ 0.65
GYPC-205ENST00000464053 CHMP3Q9Y3E7 222 aa19.13■□□□□ 0.65
GYPC-205ENST00000464053 USP42Q9H9J4 1324 aaKnown RBP19.13■□□□□ 0.65
GYPC-205ENST00000464053 IRS4O14654 1257 aaPredicted RBP19.12■□□□□ 0.65
GYPC-205ENST00000464053 RGL2O15211 777 aa19.12■□□□□ 0.65
GYPC-205ENST00000464053 BICDL1Q6ZP65 573 aa19.12■□□□□ 0.65
GYPC-205ENST00000464053 UTP14AQ9BVJ6 771 aaKnown RBP19.12■□□□□ 0.65
GYPC-205ENST00000464053 RGPD3A6NKT7 1758 aaPredicted RBP19.12■□□□□ 0.65
GYPC-205ENST00000464053 RGPD4Q7Z3J3 1758 aa19.12■□□□□ 0.65
GYPC-205ENST00000464053 RAB11FIP3O75154 756 aa19.11■□□□□ 0.65
GYPC-205ENST00000464053 NTSR2O95665 410 aa19.11■□□□□ 0.65
GYPC-205ENST00000464053 ZNF827Q17R98 1081 aa19.11■□□□□ 0.65
GYPC-205ENST00000464053 ZBTB47Q9UFB7 747 aaPredicted RBP19.11■□□□□ 0.65
GYPC-205ENST00000464053 ADRA2BP18089 450 aa19.11■□□□□ 0.65
GYPC-205ENST00000464053 PTPN12Q05209 780 aaKnown RBP19.11■□□□□ 0.65
GYPC-205ENST00000464053 RHPN1Q8TCX5 695 aa19.11■□□□□ 0.65
GYPC-205ENST00000464053 SIL1Q9H173 461 aa19.11■□□□□ 0.65
GYPC-205ENST00000464053 TSHZ2Q9NRE2 1034 aa19.11■□□□□ 0.65
GYPC-205ENST00000464053 MYH3P11055 1940 aa19.11■□□□□ 0.65
GYPC-205ENST00000464053 PLEKHM2Q8IWE5 1019 aa19.1■□□□□ 0.65
GYPC-205ENST00000464053 CCDC85AQ96PX6 553 aaPredicted RBP19.1■□□□□ 0.65
GYPC-205ENST00000464053 IL1RAPL2Q9NP60 686 aa19.1■□□□□ 0.65
GYPC-205ENST00000464053 DDX60Q8IY21 1712 aaKnown RBP19.1■□□□□ 0.65
GYPC-205ENST00000464053 CSF1RP07333 972 aa19.09■□□□□ 0.65
GYPC-205ENST00000464053 SSFA2P28290 1259 aa19.09■□□□□ 0.65
GYPC-205ENST00000464053 OS9Q13438 667 aaPredicted RBP19.09■□□□□ 0.65
GYPC-205ENST00000464053 HSP90AB4PQ58FF6 505 aa19.09■□□□□ 0.65
GYPC-205ENST00000464053 NUTM1Q86Y26 1132 aa19.09■□□□□ 0.65
GYPC-205ENST00000464053 AKT1S1Q96B36 256 aa19.09■□□□□ 0.65
GYPC-205ENST00000464053 COPRSQ9NQ92 184 aa19.09■□□□□ 0.65
GYPC-205ENST00000464053 SH3TC1Q8TE82 1336 aa19.09■□□□□ 0.65
GYPC-205ENST00000464053 TUBGCP6Q96RT7 1819 aa19.09■□□□□ 0.65
GYPC-205ENST00000464053 HCLS1P14317 486 aaPredicted RBP19.09■□□□□ 0.65
GYPC-205ENST00000464053 EN1Q05925 392 aaPredicted RBP19.09■□□□□ 0.65
GYPC-205ENST00000464053 KIF1BPQ96EK5 621 aa19.09■□□□□ 0.65
GYPC-205ENST00000464053 COL24A1Q17RW2 1714 aa19.08■□□□□ 0.64
GYPC-205ENST00000464053 PDE8AO60658 829 aa19.08■□□□□ 0.64
GYPC-205ENST00000464053 SASH1O94885 1247 aa19.08■□□□□ 0.64
GYPC-205ENST00000464053 EZH2Q15910 746 aaKnown RBP19.08■□□□□ 0.64
GYPC-205ENST00000464053 FAM161AQ3B820 660 aa19.08■□□□□ 0.64
GYPC-205ENST00000464053 TTLL11Q8NHH1 800 aa19.08■□□□□ 0.64
GYPC-205ENST00000464053 CAMKK2Q96RR4 588 aa19.08■□□□□ 0.64
GYPC-205ENST00000464053 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.08■□□□□ 0.64
GYPC-205ENST00000464053 CTSWP56202 376 aa19.07■□□□□ 0.64
GYPC-205ENST00000464053 G3BP1Q13283 466 aaKnown RBP eCLIP19.07■□□□□ 0.64
GYPC-205ENST00000464053 ZNF594Q96JF6 807 aaPredicted RBP19.07■□□□□ 0.64
GYPC-205ENST00000464053 SETDB2Q96T68 719 aa19.07■□□□□ 0.64
GYPC-205ENST00000464053 TFCP2L1Q9NZI6 479 aa19.07■□□□□ 0.64
GYPC-205ENST00000464053 LAMB2P55268 1798 aa19.06■□□□□ 0.64
GYPC-205ENST00000464053 SALL3Q9BXA9 1300 aa19.06■□□□□ 0.64
GYPC-205ENST00000464053 ERFEQ4G0M1 354 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms