RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 ALDH1B1P30837 517 aa25.05■■□□□ 1.6
CCHCR1-210ENST00000464012 CALD1Q05682 793 aaKnown RBP25.05■■□□□ 1.6
CCHCR1-210ENST00000464012 C7orf43Q8WVR3 580 aa25.05■■□□□ 1.6
CCHCR1-210ENST00000464012 IFT57Q9NWB7 429 aa25.05■■□□□ 1.6
CCHCR1-210ENST00000464012 ZNF853P0CG23 659 aa25.04■■□□□ 1.6
CCHCR1-210ENST00000464012 GNAI1P63096 354 aa25.04■■□□□ 1.6
CCHCR1-210ENST00000464012 CRY2Q49AN0 593 aa25.04■■□□□ 1.6
CCHCR1-210ENST00000464012 MRS2Q9HD23 443 aa25.04■■□□□ 1.6
CCHCR1-210ENST00000464012 WDR90Q96KV7 1748 aa25.03■■□□□ 1.6
CCHCR1-210ENST00000464012 HSP90AB3PQ58FF7 597 aa25.03■■□□□ 1.6
CCHCR1-210ENST00000464012 UTP14AQ9BVJ6 771 aaKnown RBP25.03■■□□□ 1.6
CCHCR1-210ENST00000464012 DBF4Q9UBU7 674 aaPredicted RBP25.03■■□□□ 1.6
CCHCR1-210ENST00000464012 ELL2O00472 640 aaPredicted RBP25.02■■□□□ 1.6
CCHCR1-210ENST00000464012 C3orf67Q6ZVT6 689 aa25.02■■□□□ 1.6
CCHCR1-210ENST00000464012 ZNF428Q96B54 188 aa25.02■■□□□ 1.6
CCHCR1-210ENST00000464012 FKBP4Q02790 459 aaKnown RBP eCLIP25.01■■□□□ 1.59
CCHCR1-210ENST00000464012 RBM46Q8TBY0 533 aaKnown RBP25.01■■□□□ 1.59
CCHCR1-210ENST00000464012 DPY19L2Q6NUT2 758 aa25■■□□□ 1.59
CCHCR1-210ENST00000464012 DDX60Q8IY21 1712 aaKnown RBP25■■□□□ 1.59
CCHCR1-210ENST00000464012 TAF1P21675 1872 aa24.99■■□□□ 1.59
CCHCR1-210ENST00000464012 TCIRG1Q13488 830 aa24.99■■□□□ 1.59
CCHCR1-210ENST00000464012 NLRP10Q86W26 655 aa24.99■■□□□ 1.59
CCHCR1-210ENST00000464012 RBM17Q96I25 401 aaKnown RBP24.99■■□□□ 1.59
CCHCR1-210ENST00000464012 NLRP3Q96P20 1036 aa24.99■■□□□ 1.59
CCHCR1-210ENST00000464012 ZNF277Q9NRM2 450 aaPredicted RBP24.99■■□□□ 1.59
CCHCR1-210ENST00000464012 TCERG1O14776 1098 aaKnown RBP24.98■■□□□ 1.59
CCHCR1-210ENST00000464012 RTKN2Q8IZC4 609 aa24.98■■□□□ 1.59
CCHCR1-210ENST00000464012 PLBD2Q8NHP8 589 aa24.98■■□□□ 1.59
CCHCR1-210ENST00000464012 HYPKQ9NX55 129 aa24.98■■□□□ 1.59
CCHCR1-210ENST00000464012 VEGFAP15692 232 aaPredicted RBP24.97■■□□□ 1.59
CCHCR1-210ENST00000464012 HOXA10P31260 410 aaPredicted RBP24.97■■□□□ 1.59
CCHCR1-210ENST00000464012 SLC51AQ86UW1 340 aa24.97■■□□□ 1.59
CCHCR1-210ENST00000464012 TRMT112Q9UI30 125 aaKnown RBP24.97■■□□□ 1.59
CCHCR1-210ENST00000464012 RNF123Q5XPI4 1314 aa24.96■■□□□ 1.59
CCHCR1-210ENST00000464012 PPEF1O14829 653 aaPredicted RBP24.96■■□□□ 1.59
CCHCR1-210ENST00000464012 ANKRD13DQ6ZTN6 518 aa24.96■■□□□ 1.59
CCHCR1-210ENST00000464012 SYNE4Q8N205 404 aa24.96■■□□□ 1.59
CCHCR1-210ENST00000464012 SNED1Q8TER0 1413 aa24.95■■□□□ 1.59
CCHCR1-210ENST00000464012 HCLS1P14317 486 aaPredicted RBP24.95■■□□□ 1.58
CCHCR1-210ENST00000464012 C8orf58Q8NAV2 365 aa24.95■■□□□ 1.58
CCHCR1-210ENST00000464012 TSR2Q969E8 191 aaKnown RBP24.95■■□□□ 1.58
CCHCR1-210ENST00000464012 CRAMP1Q96RY5 1269 aa24.95■■□□□ 1.58
CCHCR1-210ENST00000464012 SH3TC1Q8TE82 1336 aa24.94■■□□□ 1.58
CCHCR1-210ENST00000464012 ATP5J2-PTCD1G3V325 749 aa24.94■■□□□ 1.58
CCHCR1-210ENST00000464012 DDNO94850 711 aaPredicted RBP24.94■■□□□ 1.58
CCHCR1-210ENST00000464012 PHAXQ9H814 394 aaKnown RBP24.94■■□□□ 1.58
CCHCR1-210ENST00000464012 IARSP41252 1262 aaKnown RBP24.93■■□□□ 1.58
CCHCR1-210ENST00000464012 SLC10A5Q5PT55 438 aa24.93■■□□□ 1.58
CCHCR1-210ENST00000464012 ABCC4O15439 1325 aa24.92■■□□□ 1.58
CCHCR1-210ENST00000464012 POTECB2RU33 542 aa24.92■■□□□ 1.58
CCHCR1-210ENST00000464012 APLP1P51693 650 aa24.92■■□□□ 1.58
CCHCR1-210ENST00000464012 GOLGA2Q08379 1002 aa24.92■■□□□ 1.58
CCHCR1-210ENST00000464012 FSTL1Q12841 308 aa24.92■■□□□ 1.58
CCHCR1-210ENST00000464012 WWC1Q8IX03 1113 aa24.92■■□□□ 1.58
CCHCR1-210ENST00000464012 SMC1BQ8NDV3 1235 aa24.92■■□□□ 1.58
CCHCR1-210ENST00000464012 CCDC27Q2M243 656 aa24.91■■□□□ 1.58
CCHCR1-210ENST00000464012 CC2D2BQ6DHV5 1058 aa24.91■■□□□ 1.58
CCHCR1-210ENST00000464012 RIC3Q7Z5B4 369 aa24.91■■□□□ 1.58
CCHCR1-210ENST00000464012 TSPYL6Q8N831 410 aa24.91■■□□□ 1.58
CCHCR1-210ENST00000464012 SALL2Q9Y467 1007 aaPredicted RBP24.91■■□□□ 1.58
CCHCR1-210ENST00000464012 SCN4AP35499 1836 aa24.91■■□□□ 1.58
CCHCR1-210ENST00000464012 ZNF541Q9H0D2 1346 aa24.9■■□□□ 1.58
CCHCR1-210ENST00000464012 PSMD1Q99460 953 aa24.9■■□□□ 1.58
CCHCR1-210ENST00000464012 ISCA1Q9BUE6 129 aa24.9■■□□□ 1.58
CCHCR1-210ENST00000464012 COL4A5P29400 1685 aa24.9■■□□□ 1.58
CCHCR1-210ENST00000464012 RTL5Q5HYW3 569 aaPredicted RBP24.89■■□□□ 1.58
CCHCR1-210ENST00000464012 CCDC30Q5VVM6 783 aa24.88■■□□□ 1.57
CCHCR1-210ENST00000464012 FAM89AQ96GI7 184 aa24.88■■□□□ 1.57
CCHCR1-210ENST00000464012 TMX4Q9H1E5 349 aaPredicted RBP24.88■■□□□ 1.57
CCHCR1-210ENST00000464012 CEP350Q5VT06 3117 aa24.88■■□□□ 1.57
CCHCR1-210ENST00000464012 HTRA3P83110 453 aa24.86■■□□□ 1.57
CCHCR1-210ENST00000464012 DDX46Q7L014 1031 aaKnown RBP24.86■■□□□ 1.57
CCHCR1-210ENST00000464012 MYD88Q99836 296 aa24.86■■□□□ 1.57
CCHCR1-210ENST00000464012 FAM9BQ8IZU0 186 aa24.85■■□□□ 1.57
CCHCR1-210ENST00000464012 JDP2Q8WYK2 163 aa24.85■■□□□ 1.57
CCHCR1-210ENST00000464012 ATP6V0A2Q9Y487 856 aa24.85■■□□□ 1.57
CCHCR1-210ENST00000464012 LRRC37AA6NMS7 1700 aa24.85■■□□□ 1.57
CCHCR1-210ENST00000464012 GRIPAP1Q4V328 841 aa24.84■■□□□ 1.57
CCHCR1-210ENST00000464012 LARGE2Q8N3Y3 721 aa24.84■■□□□ 1.57
CCHCR1-210ENST00000464012 IL16Q14005 1332 aa24.84■■□□□ 1.57
CCHCR1-210ENST00000464012 COL4A1P02462 1669 aa24.83■■□□□ 1.57
CCHCR1-210ENST00000464012 FZD9O00144 591 aa24.83■■□□□ 1.57
CCHCR1-210ENST00000464012 GRAPQ13588 217 aa24.83■■□□□ 1.57
CCHCR1-210ENST00000464012 TWISTNBQ3B726 338 aaPredicted RBP24.83■■□□□ 1.57
CCHCR1-210ENST00000464012 GRAPLQ8TC17 118 aaPredicted RBP24.83■■□□□ 1.57
CCHCR1-210ENST00000464012 CHMP4AQ9BY43 222 aa24.83■■□□□ 1.57
CCHCR1-210ENST00000464012 IQCA1LA6NCM1 817 aa24.82■■□□□ 1.56
CCHCR1-210ENST00000464012 DDX58O95786 925 aaKnown RBP24.82■■□□□ 1.56
CCHCR1-210ENST00000464012 POTEIP0CG38 1075 aa24.82■■□□□ 1.56
CCHCR1-210ENST00000464012 POTEJP0CG39 1038 aa24.82■■□□□ 1.56
CCHCR1-210ENST00000464012 L3MBTL3Q96JM7 780 aaPredicted RBP24.82■■□□□ 1.56
CCHCR1-210ENST00000464012 STK31Q9BXU1 1019 aa24.82■■□□□ 1.56
CCHCR1-210ENST00000464012 IRS4O14654 1257 aaPredicted RBP24.81■■□□□ 1.56
CCHCR1-210ENST00000464012 PPIP5K2O43314 1243 aa24.81■■□□□ 1.56
CCHCR1-210ENST00000464012 BBOX1O75936 387 aa24.81■■□□□ 1.56
CCHCR1-210ENST00000464012 AOC3Q16853 763 aa24.81■■□□□ 1.56
CCHCR1-210ENST00000464012 FANCIQ9NVI1 1328 aa24.81■■□□□ 1.56
CCHCR1-210ENST00000464012 CACNA1FO60840 1977 aa24.8■■□□□ 1.56
CCHCR1-210ENST00000464012 EIF6P56537 245 aaKnown RBP24.8■■□□□ 1.56
CCHCR1-210ENST00000464012 TRIM28Q13263 835 aaKnown RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms