RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 GTF2E1P29083 439 aaPredicted RBP14.48□□□□□ -0.09
CBX3-205ENST00000462165 LBX1P52954 281 aa14.48□□□□□ -0.09
CBX3-205ENST00000462165 DCTN1Q14203 1278 aa14.48□□□□□ -0.09
CBX3-205ENST00000462165 CRY2Q49AN0 593 aa14.48□□□□□ -0.09
CBX3-205ENST00000462165 MAP1SQ66K74 1059 aaPredicted RBP14.48□□□□□ -0.09
CBX3-205ENST00000462165 CC2D2BQ6DHV5 1058 aa14.48□□□□□ -0.09
CBX3-205ENST00000462165 JDP2Q8WYK2 163 aa14.48□□□□□ -0.09
CBX3-205ENST00000462165 THSD7BQ9C0I4 1608 aa14.48□□□□□ -0.09
CBX3-205ENST00000462165 WDR33Q9C0J8 1336 aaKnown RBP14.47□□□□□ -0.09
CBX3-205ENST00000462165 COL4A5P29400 1685 aa14.47□□□□□ -0.09
CBX3-205ENST00000462165 U2AF1L5P0DN76 240 aaPredicted RBP14.47□□□□□ -0.09
CBX3-205ENST00000462165 U2AF1Q01081 240 aaKnown RBP eCLIP14.47□□□□□ -0.09
CBX3-205ENST00000462165 TAF7Q15545 349 aaPredicted RBP14.47□□□□□ -0.09
CBX3-205ENST00000462165 NYXQ9GZU5 481 aa14.47□□□□□ -0.09
CBX3-205ENST00000462165 RIC1Q4ADV7 1423 aa14.47□□□□□ -0.09
CBX3-205ENST00000462165 ABCC12Q96J65 1359 aa14.47□□□□□ -0.09
CBX3-205ENST00000462165 ERVV-1B6SEH8 477 aa14.46□□□□□ -0.09
CBX3-205ENST00000462165 HSPA8P11142 646 aaKnown RBP14.46□□□□□ -0.09
CBX3-205ENST00000462165 EIF6P56537 245 aaKnown RBP14.46□□□□□ -0.09
CBX3-205ENST00000462165 MAP2K1Q02750 393 aaPredicted RBP14.46□□□□□ -0.09
CBX3-205ENST00000462165 SPINK5Q9NQ38 1064 aaPredicted RBP14.46□□□□□ -0.09
CBX3-205ENST00000462165 HOXA10P31260 410 aaPredicted RBP14.45□□□□□ -0.1
CBX3-205ENST00000462165 GRIPAP1Q4V328 841 aa14.45□□□□□ -0.1
CBX3-205ENST00000462165 DDX21Q9NR30 783 aaKnown RBP eCLIP14.45□□□□□ -0.1
CBX3-205ENST00000462165 IBTKQ9P2D0 1353 aaPredicted RBP14.45□□□□□ -0.1
CBX3-205ENST00000462165 MAP3K15Q6ZN16 1313 aa14.44□□□□□ -0.1
CBX3-205ENST00000462165 LMOD1P29536 600 aaPredicted RBP14.44□□□□□ -0.1
CBX3-205ENST00000462165 NUTM1Q86Y26 1132 aa14.44□□□□□ -0.1
CBX3-205ENST00000462165 ABT1Q9ULW3 272 aaKnown RBP14.44□□□□□ -0.1
CBX3-205ENST00000462165 GJA3Q9Y6H8 435 aa14.44□□□□□ -0.1
CBX3-205ENST00000462165 PPP2R1AP30153 589 aa14.43□□□□□ -0.1
CBX3-205ENST00000462165 SCNN1DP51172 638 aa14.43□□□□□ -0.1
CBX3-205ENST00000462165 RPGRQ92834 1020 aaKnown RBP14.43□□□□□ -0.1
CBX3-205ENST00000462165 MIS18AQ9NYP9 233 aa14.43□□□□□ -0.1
CBX3-205ENST00000462165 UBN2Q6ZU65 1347 aa14.42□□□□□ -0.1
CBX3-205ENST00000462165 EPS15P42566 896 aa14.42□□□□□ -0.1
CBX3-205ENST00000462165 TTLL7Q6ZT98 887 aa14.42□□□□□ -0.1
CBX3-205ENST00000462165 USP50Q70EL3 339 aaPredicted RBP14.42□□□□□ -0.1
CBX3-205ENST00000462165 LARGE2Q8N3Y3 721 aa14.42□□□□□ -0.1
CBX3-205ENST00000462165 NGEFQ8N5V2 710 aa14.42□□□□□ -0.1
CBX3-205ENST00000462165 ABHD8Q96I13 439 aa14.42□□□□□ -0.1
CBX3-205ENST00000462165 CRAMP1Q96RY5 1269 aa14.42□□□□□ -0.1
CBX3-205ENST00000462165 ECE1P42892 770 aa14.41□□□□□ -0.1
CBX3-205ENST00000462165 KIF6Q6ZMV9 814 aa14.41□□□□□ -0.1
CBX3-205ENST00000462165 PNISRQ8TF01 805 aaKnown RBP14.41□□□□□ -0.1
CBX3-205ENST00000462165 PPEF1O14829 653 aaPredicted RBP14.4□□□□□ -0.1
CBX3-205ENST00000462165 GPTP24298 496 aa14.4□□□□□ -0.1
CBX3-205ENST00000462165 DSG3P32926 999 aa14.4□□□□□ -0.1
CBX3-205ENST00000462165 EIF4A1P60842 406 aaKnown RBP14.4□□□□□ -0.1
CBX3-205ENST00000462165 FMR1Q06787 632 aaKnown RBP eCLIP14.4□□□□□ -0.1
CBX3-205ENST00000462165 SUSD4Q5VX71 490 aa14.4□□□□□ -0.1
CBX3-205ENST00000462165 ZNF34Q8IZ26 560 aa14.4□□□□□ -0.1
CBX3-205ENST00000462165 RBM17Q96I25 401 aaKnown RBP14.4□□□□□ -0.1
CBX3-205ENST00000462165 CAPNS2Q96L46 248 aa14.4□□□□□ -0.1
CBX3-205ENST00000462165 RRP7AQ9Y3A4 280 aaKnown RBP14.4□□□□□ -0.1
CBX3-205ENST00000462165 NTSR2O95665 410 aa14.39□□□□□ -0.11
CBX3-205ENST00000462165 CST9Q5W186 159 aa14.39□□□□□ -0.11
CBX3-205ENST00000462165 CYP4F22Q6NT55 531 aa14.39□□□□□ -0.11
CBX3-205ENST00000462165 NIM1KQ8IY84 436 aa14.39□□□□□ -0.11
CBX3-205ENST00000462165 VPS33BQ9H267 617 aa14.39□□□□□ -0.11
CBX3-205ENST00000462165 TLL2Q9Y6L7 1015 aa14.39□□□□□ -0.11
CBX3-205ENST00000462165 LAMB2P55268 1798 aa14.38□□□□□ -0.11
CBX3-205ENST00000462165 PPIP5K2O43314 1243 aa14.38□□□□□ -0.11
CBX3-205ENST00000462165 MYL6BP14649 208 aa14.38□□□□□ -0.11
CBX3-205ENST00000462165 GIGYF2Q6Y7W6 1299 aaKnown RBP14.38□□□□□ -0.11
CBX3-205ENST00000462165 SLC51AQ86UW1 340 aa14.38□□□□□ -0.11
CBX3-205ENST00000462165 GPR101Q96P66 508 aaPredicted RBP14.38□□□□□ -0.11
CBX3-205ENST00000462165 BEGAINQ9BUH8 593 aa14.38□□□□□ -0.11
CBX3-205ENST00000462165 ZBTB3Q9H5J0 574 aa14.38□□□□□ -0.11
CBX3-205ENST00000462165 ADARB2Q9NS39 739 aaKnown RBP14.38□□□□□ -0.11
CBX3-205ENST00000462165 ANKRD36CQ5JPF3 1778 aa14.37□□□□□ -0.11
CBX3-205ENST00000462165 TRAF5O00463 557 aa14.37□□□□□ -0.11
CBX3-205ENST00000462165 SLC4A2P04920 1241 aa14.37□□□□□ -0.11
CBX3-205ENST00000462165 NEFMP07197 916 aa14.37□□□□□ -0.11
CBX3-205ENST00000462165 C3orf67Q6ZVT6 689 aa14.37□□□□□ -0.11
CBX3-205ENST00000462165 PAXIP1Q6ZW49 1069 aaPredicted RBP14.37□□□□□ -0.11
CBX3-205ENST00000462165 PPP1R42Q7Z4L9 355 aa14.37□□□□□ -0.11
CBX3-205ENST00000462165 NLRP3Q96P20 1036 aa14.37□□□□□ -0.11
CBX3-205ENST00000462165 ERBB4Q15303 1308 aa14.37□□□□□ -0.11
CBX3-205ENST00000462165 TCERG1O14776 1098 aaKnown RBP14.36□□□□□ -0.11
CBX3-205ENST00000462165 MAP2K2P36507 400 aa14.36□□□□□ -0.11
CBX3-205ENST00000462165 AOC3Q16853 763 aa14.36□□□□□ -0.11
CBX3-205ENST00000462165 FAM161AQ3B820 660 aa14.36□□□□□ -0.11
CBX3-205ENST00000462165 PARP10Q53GL7 1025 aa14.36□□□□□ -0.11
CBX3-205ENST00000462165 RTFDC1Q9BY42 306 aaPredicted RBP14.36□□□□□ -0.11
CBX3-205ENST00000462165 TMX4Q9H1E5 349 aaPredicted RBP14.36□□□□□ -0.11
CBX3-205ENST00000462165 GPRC5DQ9NZD1 345 aa14.36□□□□□ -0.11
CBX3-205ENST00000462165 ATP6V0A2Q9Y487 856 aa14.36□□□□□ -0.11
CBX3-205ENST00000462165 SLC34A2O95436 690 aa14.35□□□□□ -0.11
CBX3-205ENST00000462165 CXCL9Q07325 125 aa14.35□□□□□ -0.11
CBX3-205ENST00000462165 SLC10A5Q5PT55 438 aa14.35□□□□□ -0.11
CBX3-205ENST00000462165 SUPT20HQ8NEM7 779 aa14.35□□□□□ -0.11
CBX3-205ENST00000462165 PLEKHF1Q96S99 279 aa14.35□□□□□ -0.11
CBX3-205ENST00000462165 ZNRF3Q9ULT6 936 aa14.35□□□□□ -0.11
CBX3-205ENST00000462165 GRM1Q13255 1194 aa14.34□□□□□ -0.11
CBX3-205ENST00000462165 NFE2L2Q16236 605 aa14.34□□□□□ -0.11
CBX3-205ENST00000462165 LRP10Q7Z4F1 713 aa14.34□□□□□ -0.11
CBX3-205ENST00000462165 SAPCD2Q86UD0 394 aa14.34□□□□□ -0.11
CBX3-205ENST00000462165 HHIPL1Q96JK4 782 aa14.34□□□□□ -0.11
CBX3-205ENST00000462165 PGAP2Q9UHJ9 254 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms