RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 KCNJ4P48050 445 aa13.98□□□□□ -0.17
PDZRN3-203ENST00000462146 TYRO3Q06418 890 aa13.98□□□□□ -0.17
PDZRN3-203ENST00000462146 LRMPQ12912 555 aa13.98□□□□□ -0.17
PDZRN3-203ENST00000462146 AACSQ86V21 672 aa13.98□□□□□ -0.17
PDZRN3-203ENST00000462146 ZSCAN31Q96LW9 406 aaPredicted RBP13.98□□□□□ -0.17
PDZRN3-203ENST00000462146 TLR7Q9NYK1 1049 aaKnown RBP13.98□□□□□ -0.17
PDZRN3-203ENST00000462146 TFIP11Q9UBB9 837 aaKnown RBP13.98□□□□□ -0.17
PDZRN3-203ENST00000462146 IFIT2P09913 472 aaKnown RBP13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 CEBPAP49715 358 aaPredicted RBP13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 STK3Q13188 491 aa13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 ABTB2Q8N961 1025 aa13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 KCNB2Q92953 911 aa13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 CCDC8Q9H0W5 538 aaPredicted RBP13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 NUP62CLQ9H1M0 184 aa13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 NRBP1Q9UHY1 535 aa13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 MED1Q15648 1581 aaPredicted RBP13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 PRAMEF22A3QJZ6 481 aa13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 TM6SF1Q9BZW5 370 aa13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 BABAM1Q9NWV8 329 aa13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 A0A0D9SFI3 127 aa13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 SPDYE4A6NLX3 237 aa13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 SLC27A2O14975 620 aa13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 KRT85P78386 507 aa13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 MAP3K11Q16584 847 aa13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 HSP90AB4PQ58FF6 505 aa13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 FAM200AQ8TCP9 573 aa13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 DACT1Q9NYF0 836 aa13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 MAP3K2Q9Y2U5 619 aa13.97□□□□□ -0.17
PDZRN3-203ENST00000462146 ZSCAN20P17040 1043 aaPredicted RBP13.96□□□□□ -0.17
PDZRN3-203ENST00000462146 ANO6Q4KMQ2 910 aa13.96□□□□□ -0.17
PDZRN3-203ENST00000462146 NBPF6Q5VWK0 638 aa13.96□□□□□ -0.18
PDZRN3-203ENST00000462146 LARP1Q6PKG0 1096 aaKnown RBP13.96□□□□□ -0.18
PDZRN3-203ENST00000462146 NBPF4Q96M43 638 aa13.96□□□□□ -0.18
PDZRN3-203ENST00000462146 CBX8Q9HC52 389 aa13.96□□□□□ -0.18
PDZRN3-203ENST00000462146 C9orf78Q9NZ63 289 aaPredicted RBP13.96□□□□□ -0.18
PDZRN3-203ENST00000462146 SASH1O94885 1247 aa13.95□□□□□ -0.18
PDZRN3-203ENST00000462146 ZKSCAN1P17029 563 aaPredicted RBP13.95□□□□□ -0.18
PDZRN3-203ENST00000462146 MPRIPQ6WCQ1 1025 aa13.95□□□□□ -0.18
PDZRN3-203ENST00000462146 CCDC186Q7Z3E2 898 aa13.95□□□□□ -0.18
PDZRN3-203ENST00000462146 EAF2Q96CJ1 260 aaPredicted RBP13.95□□□□□ -0.18
PDZRN3-203ENST00000462146 EVI5LQ96CN4 794 aa13.95□□□□□ -0.18
PDZRN3-203ENST00000462146 NPHP4O75161 1426 aaPredicted RBP13.95□□□□□ -0.18
PDZRN3-203ENST00000462146 MAP4K1Q92918 833 aa13.95□□□□□ -0.18
PDZRN3-203ENST00000462146 BTBD11A6QL63 1104 aa13.94□□□□□ -0.18
PDZRN3-203ENST00000462146 MTX1Q13505 466 aa13.94□□□□□ -0.18
PDZRN3-203ENST00000462146 TOB2Q14106 344 aaPredicted RBP13.94□□□□□ -0.18
PDZRN3-203ENST00000462146 KLHDC4Q8TBB5 520 aa13.94□□□□□ -0.18
PDZRN3-203ENST00000462146 SIL1Q9H173 461 aa13.94□□□□□ -0.18
PDZRN3-203ENST00000462146 TNMDQ9H2S6 317 aa13.94□□□□□ -0.18
PDZRN3-203ENST00000462146 BOLA2Q9H3K6 86 aa13.94□□□□□ -0.18
PDZRN3-203ENST00000462146 U2AF2P26368 475 aaKnown RBP eCLIP13.94□□□□□ -0.18
PDZRN3-203ENST00000462146 ZNF589Q86UQ0 364 aaPredicted RBP13.94□□□□□ -0.18
PDZRN3-203ENST00000462146 EDC3Q96F86 508 aaKnown RBP13.94□□□□□ -0.18
PDZRN3-203ENST00000462146 KAZALD1Q96I82 304 aa13.94□□□□□ -0.18
PDZRN3-203ENST00000462146 BCL11BQ9C0K0 894 aaPredicted RBP13.94□□□□□ -0.18
PDZRN3-203ENST00000462146 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.94□□□□□ -0.18
PDZRN3-203ENST00000462146 PDCL2Q8N4E4 241 aa13.94□□□□□ -0.18
PDZRN3-203ENST00000462146 LRRC59Q96AG4 307 aaKnown RBP13.94□□□□□ -0.18
PDZRN3-203ENST00000462146 SUCLG2Q96I99 432 aa13.94□□□□□ -0.18
PDZRN3-203ENST00000462146 C16orf45Q96MC5 204 aaPredicted RBP13.94□□□□□ -0.18
PDZRN3-203ENST00000462146 GOLGA6L6A8MZA4 724 aa13.93□□□□□ -0.18
PDZRN3-203ENST00000462146 NR1I2O75469 434 aa13.93□□□□□ -0.18
PDZRN3-203ENST00000462146 CHGBP05060 677 aa13.93□□□□□ -0.18
PDZRN3-203ENST00000462146 DMTNQ08495 405 aa13.93□□□□□ -0.18
PDZRN3-203ENST00000462146 GPATCH3Q96I76 525 aa13.93□□□□□ -0.18
PDZRN3-203ENST00000462146 SPATA32Q96LK8 384 aa13.93□□□□□ -0.18
PDZRN3-203ENST00000462146 JAK2O60674 1132 aa13.93□□□□□ -0.18
PDZRN3-203ENST00000462146 DRC7Q8IY82 874 aa13.93□□□□□ -0.18
PDZRN3-203ENST00000462146 DDX11Q96FC9 970 aa13.93□□□□□ -0.18
PDZRN3-203ENST00000462146 CHAF1AQ13111 956 aaPredicted RBP13.92□□□□□ -0.18
PDZRN3-203ENST00000462146 BLOC1S2Q6QNY1 142 aa13.92□□□□□ -0.18
PDZRN3-203ENST00000462146 LEO1Q8WVC0 666 aaPredicted RBP13.92□□□□□ -0.18
PDZRN3-203ENST00000462146 PGBD1Q96JS3 809 aa13.92□□□□□ -0.18
PDZRN3-203ENST00000462146 FSD1Q9BTV5 496 aa13.92□□□□□ -0.18
PDZRN3-203ENST00000462146 DNAJC25Q9H1X3 360 aa13.92□□□□□ -0.18
PDZRN3-203ENST00000462146 BICC1Q9H694 974 aaKnown RBP13.92□□□□□ -0.18
PDZRN3-203ENST00000462146 ELP1O95163 1332 aa13.92□□□□□ -0.18
PDZRN3-203ENST00000462146 LMO7Q8WWI1 1683 aa13.92□□□□□ -0.18
PDZRN3-203ENST00000462146 RPS6KB1P23443 525 aa13.92□□□□□ -0.18
PDZRN3-203ENST00000462146 TEFQ10587 303 aa13.92□□□□□ -0.18
PDZRN3-203ENST00000462146 NAA30Q147X3 362 aaPredicted RBP13.92□□□□□ -0.18
PDZRN3-203ENST00000462146 NDUFB9Q9Y6M9 179 aa13.92□□□□□ -0.18
PDZRN3-203ENST00000462146 PXDNQ92626 1479 aa13.92□□□□□ -0.18
PDZRN3-203ENST00000462146 ANKRD7Q92527 254 aa13.91□□□□□ -0.18
PDZRN3-203ENST00000462146 TRIM5Q9C035 493 aa13.91□□□□□ -0.18
PDZRN3-203ENST00000462146 USP54Q70EL1 1684 aa13.91□□□□□ -0.18
PDZRN3-203ENST00000462146 GOLGA6L4A6NEF3 574 aa13.91□□□□□ -0.18
PDZRN3-203ENST00000462146 TPM3P06753 285 aa13.91□□□□□ -0.18
PDZRN3-203ENST00000462146 AIMP1Q12904 312 aaKnown RBP13.91□□□□□ -0.18
PDZRN3-203ENST00000462146 ZNF530Q6P9A1 599 aaPredicted RBP13.91□□□□□ -0.18
PDZRN3-203ENST00000462146 CTIFO43310 598 aaKnown RBP13.91□□□□□ -0.18
PDZRN3-203ENST00000462146 HOXB7P09629 217 aa13.91□□□□□ -0.18
PDZRN3-203ENST00000462146 ZNF75DP51815 510 aa13.91□□□□□ -0.18
PDZRN3-203ENST00000462146 CCDC144BQ3MJ40 725 aa13.91□□□□□ -0.18
PDZRN3-203ENST00000462146 PLA2G4DQ86XP0 818 aa13.91□□□□□ -0.18
PDZRN3-203ENST00000462146 CCDC144CPQ8IYA2 1237 aa13.91□□□□□ -0.18
PDZRN3-203ENST00000462146 DBF4Q9UBU7 674 aaPredicted RBP13.91□□□□□ -0.18
PDZRN3-203ENST00000462146 COL15A1P39059 1388 aa13.9□□□□□ -0.18
PDZRN3-203ENST00000462146 ZSCAN25Q6NSZ9 544 aa13.9□□□□□ -0.18
PDZRN3-203ENST00000462146 CLSTN2Q9H4D0 955 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms