RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 ERVV-1B6SEH8 477 aa20.22■□□□□ 0.83
SF3A3-203ENST00000461869 CRY2Q49AN0 593 aa20.22■□□□□ 0.83
SF3A3-203ENST00000461869 MAP1SQ66K74 1059 aaPredicted RBP20.22■□□□□ 0.83
SF3A3-203ENST00000461869 CNTROBQ8N137 903 aa20.22■□□□□ 0.83
SF3A3-203ENST00000461869 GPC2Q8N158 579 aa20.22■□□□□ 0.83
SF3A3-203ENST00000461869 JDP2Q8WYK2 163 aa20.22■□□□□ 0.83
SF3A3-203ENST00000461869 PSMD1Q99460 953 aa20.22■□□□□ 0.83
SF3A3-203ENST00000461869 PNNQ9H307 717 aaKnown RBP20.22■□□□□ 0.83
SF3A3-203ENST00000461869 PRDM10Q9NQV6 1147 aa20.22■□□□□ 0.83
SF3A3-203ENST00000461869 CTCFP49711 727 aaPredicted RBP20.21■□□□□ 0.83
SF3A3-203ENST00000461869 CC2D2BQ6DHV5 1058 aa20.21■□□□□ 0.83
SF3A3-203ENST00000461869 ABCC12Q96J65 1359 aa20.21■□□□□ 0.83
SF3A3-203ENST00000461869 NEFMP07197 916 aa20.2■□□□□ 0.82
SF3A3-203ENST00000461869 EIF6P56537 245 aaKnown RBP20.2■□□□□ 0.82
SF3A3-203ENST00000461869 KIF6Q6ZMV9 814 aa20.2■□□□□ 0.82
SF3A3-203ENST00000461869 RPGRQ92834 1020 aaKnown RBP20.2■□□□□ 0.82
SF3A3-203ENST00000461869 RRP7AQ9Y3A4 280 aaKnown RBP20.2■□□□□ 0.82
SF3A3-203ENST00000461869 MAP3K15Q6ZN16 1313 aa20.2■□□□□ 0.82
SF3A3-203ENST00000461869 DEFB115Q30KQ5 88 aa20.19■□□□□ 0.82
SF3A3-203ENST00000461869 GJA3Q9Y6H8 435 aa20.19■□□□□ 0.82
SF3A3-203ENST00000461869 SNED1Q8TER0 1413 aa20.19■□□□□ 0.82
SF3A3-203ENST00000461869 ADAMTSL1Q8N6G6 1762 aa20.18■□□□□ 0.82
SF3A3-203ENST00000461869 MYL6BP14649 208 aa20.18■□□□□ 0.82
SF3A3-203ENST00000461869 HOXA10P31260 410 aaPredicted RBP20.18■□□□□ 0.82
SF3A3-203ENST00000461869 TTLL7Q6ZT98 887 aa20.18■□□□□ 0.82
SF3A3-203ENST00000461869 WBP1LQ9NX94 342 aa20.18■□□□□ 0.82
SF3A3-203ENST00000461869 LAMB4A4D0S4 1761 aa20.17■□□□□ 0.82
SF3A3-203ENST00000461869 RASSF10A6NK89 507 aa20.17■□□□□ 0.82
SF3A3-203ENST00000461869 GPTP24298 496 aa20.17■□□□□ 0.82
SF3A3-203ENST00000461869 EIF4A1P60842 406 aaKnown RBP20.17■□□□□ 0.82
SF3A3-203ENST00000461869 GRIPAP1Q4V328 841 aa20.17■□□□□ 0.82
SF3A3-203ENST00000461869 SUSD4Q5VX71 490 aa20.17■□□□□ 0.82
SF3A3-203ENST00000461869 RUNDC1Q96C34 613 aa20.17■□□□□ 0.82
SF3A3-203ENST00000461869 ZBTB3Q9H5J0 574 aa20.17■□□□□ 0.82
SF3A3-203ENST00000461869 ABT1Q9ULW3 272 aaKnown RBP20.17■□□□□ 0.82
SF3A3-203ENST00000461869 LMOD1P29536 600 aaPredicted RBP20.16■□□□□ 0.82
SF3A3-203ENST00000461869 RBM17Q96I25 401 aaKnown RBP20.16■□□□□ 0.82
SF3A3-203ENST00000461869 UBN2Q6ZU65 1347 aa20.16■□□□□ 0.82
SF3A3-203ENST00000461869 TCERG1O14776 1098 aaKnown RBP20.15■□□□□ 0.82
SF3A3-203ENST00000461869 LBX1P52954 281 aa20.15■□□□□ 0.82
SF3A3-203ENST00000461869 LARGE2Q8N3Y3 721 aa20.15■□□□□ 0.82
SF3A3-203ENST00000461869 CRAMP1Q96RY5 1269 aa20.15■□□□□ 0.82
SF3A3-203ENST00000461869 IBTKQ9P2D0 1353 aaPredicted RBP20.14■□□□□ 0.81
SF3A3-203ENST00000461869 WDR33Q9C0J8 1336 aaKnown RBP20.14■□□□□ 0.81
SF3A3-203ENST00000461869 PPEF1O14829 653 aaPredicted RBP20.14■□□□□ 0.81
SF3A3-203ENST00000461869 THUMPD2Q9BTF0 503 aaKnown RBP20.14■□□□□ 0.81
SF3A3-203ENST00000461869 DDX21Q9NR30 783 aaKnown RBP eCLIP20.14■□□□□ 0.81
SF3A3-203ENST00000461869 COL4A5P29400 1685 aa20.13■□□□□ 0.81
SF3A3-203ENST00000461869 RIC1Q4ADV7 1423 aa20.13■□□□□ 0.81
SF3A3-203ENST00000461869 MAPK8IP3Q9UPT6 1336 aa20.13■□□□□ 0.81
SF3A3-203ENST00000461869 EPS15P42566 896 aa20.13■□□□□ 0.81
SF3A3-203ENST00000461869 NCBP3Q53F19 620 aaKnown RBP20.13■□□□□ 0.81
SF3A3-203ENST00000461869 CCDC146Q8IYE0 955 aa20.13■□□□□ 0.81
SF3A3-203ENST00000461869 ZNF34Q8IZ26 560 aa20.13■□□□□ 0.81
SF3A3-203ENST00000461869 PLEKHF1Q96S99 279 aa20.13■□□□□ 0.81
SF3A3-203ENST00000461869 NUP98P52948 1817 aa20.13■□□□□ 0.81
SF3A3-203ENST00000461869 NTSR2O95665 410 aa20.12■□□□□ 0.81
SF3A3-203ENST00000461869 SCNN1DP51172 638 aa20.12■□□□□ 0.81
SF3A3-203ENST00000461869 MAP2K1Q02750 393 aaPredicted RBP20.12■□□□□ 0.81
SF3A3-203ENST00000461869 NFE2L2Q16236 605 aa20.12■□□□□ 0.81
SF3A3-203ENST00000461869 GIGYF2Q6Y7W6 1299 aaKnown RBP20.12■□□□□ 0.81
SF3A3-203ENST00000461869 PPP1R42Q7Z4L9 355 aa20.12■□□□□ 0.81
SF3A3-203ENST00000461869 SLC51AQ86UW1 340 aa20.12■□□□□ 0.81
SF3A3-203ENST00000461869 NIM1KQ8IY84 436 aa20.12■□□□□ 0.81
SF3A3-203ENST00000461869 KDM3BQ7LBC6 1761 aa20.12■□□□□ 0.81
SF3A3-203ENST00000461869 TMX4Q9H1E5 349 aaPredicted RBP20.11■□□□□ 0.81
SF3A3-203ENST00000461869 HSPA8P11142 646 aaKnown RBP20.1■□□□□ 0.81
SF3A3-203ENST00000461869 FMR1Q06787 632 aaKnown RBP eCLIP20.1■□□□□ 0.813e-11■■■■■ 43.1
SF3A3-203ENST00000461869 C3orf67Q6ZVT6 689 aa20.1■□□□□ 0.81
SF3A3-203ENST00000461869 USP50Q70EL3 339 aaPredicted RBP20.1■□□□□ 0.81
SF3A3-203ENST00000461869 NLRP3Q96P20 1036 aa20.1■□□□□ 0.81
SF3A3-203ENST00000461869 LTBP1Q14766 1721 aa20.1■□□□□ 0.81
SF3A3-203ENST00000461869 ERBB4Q15303 1308 aa20.09■□□□□ 0.81
SF3A3-203ENST00000461869 APAF1O14727 1248 aa20.09■□□□□ 0.81
SF3A3-203ENST00000461869 PPIP5K2O43314 1243 aa20.09■□□□□ 0.81
SF3A3-203ENST00000461869 PARP10Q53GL7 1025 aa20.09■□□□□ 0.81
SF3A3-203ENST00000461869 DLG5Q8TDM6 1919 aa20.09■□□□□ 0.81
SF3A3-203ENST00000461869 AOC3Q16853 763 aa20.08■□□□□ 0.81
SF3A3-203ENST00000461869 PAXIP1Q6ZW49 1069 aaPredicted RBP20.08■□□□□ 0.81
SF3A3-203ENST00000461869 ATP6V0A2Q9Y487 856 aa20.08■□□□□ 0.81
SF3A3-203ENST00000461869 ECE1P42892 770 aa20.07■□□□□ 0.8
SF3A3-203ENST00000461869 CAPNS2Q96L46 248 aa20.07■□□□□ 0.8
SF3A3-203ENST00000461869 UTP14AQ9BVJ6 771 aaKnown RBP20.07■□□□□ 0.8
SF3A3-203ENST00000461869 VPS33BQ9H267 617 aa20.07■□□□□ 0.8
SF3A3-203ENST00000461869 TSPYL4Q9UJ04 414 aa20.07■□□□□ 0.8
SF3A3-203ENST00000461869 TRAF5O00463 557 aa20.06■□□□□ 0.8
SF3A3-203ENST00000461869 EIF2S2P20042 333 aaKnown RBP20.06■□□□□ 0.8
SF3A3-203ENST00000461869 GRM1Q13255 1194 aa20.06■□□□□ 0.8
SF3A3-203ENST00000461869 SLC10A5Q5PT55 438 aa20.06■□□□□ 0.8
SF3A3-203ENST00000461869 CST9Q5W186 159 aa20.06■□□□□ 0.8
SF3A3-203ENST00000461869 PDIA6Q15084 440 aa20.05■□□□□ 0.8
SF3A3-203ENST00000461869 CCDC27Q2M243 656 aa20.05■□□□□ 0.8
SF3A3-203ENST00000461869 CYP4F22Q6NT55 531 aa20.05■□□□□ 0.8
SF3A3-203ENST00000461869 LRP10Q7Z4F1 713 aa20.05■□□□□ 0.8
SF3A3-203ENST00000461869 SUPT20HQ8NEM7 779 aa20.05■□□□□ 0.8
SF3A3-203ENST00000461869 GPR101Q96P66 508 aaPredicted RBP20.05■□□□□ 0.8
SF3A3-203ENST00000461869 BEGAINQ9BUH8 593 aa20.05■□□□□ 0.8
SF3A3-203ENST00000461869 ADARB2Q9NS39 739 aaKnown RBP20.05■□□□□ 0.8
SF3A3-203ENST00000461869 GPRC5DQ9NZD1 345 aa20.05■□□□□ 0.8
SF3A3-203ENST00000461869 ZNRF3Q9ULT6 936 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms