RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 C16orf71Q8IYS4 520 aaPredicted RBP20.94■□□□□ 0.94
NELFCD-201ENST00000460601 KLHDC4Q8TBB5 520 aa20.94■□□□□ 0.94
NELFCD-201ENST00000460601 ANKRD36CQ5JPF3 1778 aa20.94■□□□□ 0.94
NELFCD-201ENST00000460601 TSHZ2Q9NRE2 1034 aa20.93■□□□□ 0.94
NELFCD-201ENST00000460601 APBA3O96018 575 aa20.93■□□□□ 0.94
NELFCD-201ENST00000460601 TRIM28Q13263 835 aaKnown RBP20.93■□□□□ 0.94
NELFCD-201ENST00000460601 RC3H1Q5TC82 1133 aaKnown RBP20.93■□□□□ 0.94
NELFCD-201ENST00000460601 FAM177BA6PVY3 158 aa20.92■□□□□ 0.94
NELFCD-201ENST00000460601 RPS6KA4O75676 772 aa20.92■□□□□ 0.94
NELFCD-201ENST00000460601 SURF6O75683 361 aaKnown RBP20.92■□□□□ 0.94
NELFCD-201ENST00000460601 OTUD7AQ8TE49 926 aaPredicted RBP20.92■□□□□ 0.94
NELFCD-201ENST00000460601 SRP68Q9UHB9 627 aaKnown RBP20.92■□□□□ 0.94
NELFCD-201ENST00000460601 ZNF34Q8IZ26 560 aa20.92■□□□□ 0.94
NELFCD-201ENST00000460601 FOXO4P98177 505 aa20.91■□□□□ 0.94
NELFCD-201ENST00000460601 TXNRD1Q16881 649 aa20.91■□□□□ 0.94
NELFCD-201ENST00000460601 HSP90AB3PQ58FF7 597 aa20.91■□□□□ 0.94
NELFCD-201ENST00000460601 RTCBQ9Y3I0 505 aaKnown RBP20.91■□□□□ 0.94
NELFCD-201ENST00000460601 BCORQ6W2J9 1755 aa20.9■□□□□ 0.94
NELFCD-201ENST00000460601 LMBR1LQ6UX01 489 aa20.9■□□□□ 0.94
NELFCD-201ENST00000460601 ZBTB38Q8NAP3 1195 aaPredicted RBP20.9■□□□□ 0.94
NELFCD-201ENST00000460601 ARHGEF1Q92888 912 aaKnown RBP20.9■□□□□ 0.94
NELFCD-201ENST00000460601 AK7Q96M32 723 aa20.9■□□□□ 0.94
NELFCD-201ENST00000460601 HDAC5Q9UQL6 1122 aa20.9■□□□□ 0.94
NELFCD-201ENST00000460601 RABL6Q3YEC7 729 aaPredicted RBP20.89■□□□□ 0.94
NELFCD-201ENST00000460601 USPL1Q5W0Q7 1092 aa20.89■□□□□ 0.94
NELFCD-201ENST00000460601 BCL2L12Q9HB09 334 aa20.89■□□□□ 0.94
NELFCD-201ENST00000460601 NIP7Q9Y221 180 aaKnown RBP eCLIP20.89■□□□□ 0.94
NELFCD-201ENST00000460601 SLC27A3Q5K4L6 730 aa20.89■□□□□ 0.93
NELFCD-201ENST00000460601 SUSD4Q5VX71 490 aa20.89■□□□□ 0.93
NELFCD-201ENST00000460601 CCDC85AQ96PX6 553 aaPredicted RBP20.89■□□□□ 0.93
NELFCD-201ENST00000460601 SIL1Q9H173 461 aa20.89■□□□□ 0.93
NELFCD-201ENST00000460601 TRMT112Q9UI30 125 aaKnown RBP20.89■□□□□ 0.93
NELFCD-201ENST00000460601 CHMP3Q9Y3E7 222 aa20.89■□□□□ 0.93
NELFCD-201ENST00000460601 PCCAP05165 728 aaPredicted RBP20.88■□□□□ 0.93
NELFCD-201ENST00000460601 IL1RAPL2Q9NP60 686 aa20.88■□□□□ 0.93
NELFCD-201ENST00000460601 BICDL1Q6ZP65 573 aa20.87■□□□□ 0.93
NELFCD-201ENST00000460601 LRRCC1Q9C099 1032 aa20.87■□□□□ 0.93
NELFCD-201ENST00000460601 TNS1Q9HBL0 1735 aaKnown RBP20.87■□□□□ 0.93
NELFCD-201ENST00000460601 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.87■□□□□ 0.93
NELFCD-201ENST00000460601 C4AP0C0L4 1744 aa20.87■□□□□ 0.93
NELFCD-201ENST00000460601 SCN7AQ01118 1682 aa20.86■□□□□ 0.93
NELFCD-201ENST00000460601 ILDR1Q86SU0 546 aaPredicted RBP20.86■□□□□ 0.93
NELFCD-201ENST00000460601 TBC1D9BQ66K14 1250 aa20.86■□□□□ 0.93
NELFCD-201ENST00000460601 ZBTB47Q9UFB7 747 aaPredicted RBP20.86■□□□□ 0.93
NELFCD-201ENST00000460601 NARFQ9UHQ1 456 aa20.86■□□□□ 0.93
NELFCD-201ENST00000460601 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.85■□□□□ 0.93
NELFCD-201ENST00000460601 PLSCR1O15162 318 aa20.85■□□□□ 0.93
NELFCD-201ENST00000460601 RFX5P48382 616 aaPredicted RBP20.85■□□□□ 0.93
NELFCD-201ENST00000460601 NUTM1Q86Y26 1132 aa20.85■□□□□ 0.93
NELFCD-201ENST00000460601 UBR3Q6ZT12 1888 aa20.84■□□□□ 0.93
NELFCD-201ENST00000460601 PLEKHM2Q8IWE5 1019 aa20.84■□□□□ 0.93
NELFCD-201ENST00000460601 RHPN1Q8TCX5 695 aa20.84■□□□□ 0.93
NELFCD-201ENST00000460601 ZNF652Q9Y2D9 606 aa20.84■□□□□ 0.93
NELFCD-201ENST00000460601 NOP58Q9Y2X3 529 aaKnown RBP20.84■□□□□ 0.93
NELFCD-201ENST00000460601 IRS4O14654 1257 aaPredicted RBP20.84■□□□□ 0.93
NELFCD-201ENST00000460601 ZPR1O75312 459 aa20.84■□□□□ 0.93
NELFCD-201ENST00000460601 PTPN12Q05209 780 aaKnown RBP20.84■□□□□ 0.93
NELFCD-201ENST00000460601 OS9Q13438 667 aaPredicted RBP20.84■□□□□ 0.93
NELFCD-201ENST00000460601 TRAPPC3LQ5T215 181 aa20.84■□□□□ 0.93
NELFCD-201ENST00000460601 TSHZ3Q63HK5 1081 aa20.84■□□□□ 0.93
NELFCD-201ENST00000460601 RFC4P35249 363 aa20.83■□□□□ 0.93
NELFCD-201ENST00000460601 ZNF827Q17R98 1081 aa20.83■□□□□ 0.93
NELFCD-201ENST00000460601 CLEC4GQ6UXB4 293 aa20.83■□□□□ 0.93
NELFCD-201ENST00000460601 HCLS1P14317 486 aaPredicted RBP20.83■□□□□ 0.92
NELFCD-201ENST00000460601 FAM161AQ3B820 660 aa20.83■□□□□ 0.92
NELFCD-201ENST00000460601 C8orf34Q49A92 452 aa20.83■□□□□ 0.92
NELFCD-201ENST00000460601 NTSR2O95665 410 aa20.82■□□□□ 0.92
NELFCD-201ENST00000460601 ZNF594Q96JF6 807 aaPredicted RBP20.82■□□□□ 0.92
NELFCD-201ENST00000460601 UTP14AQ9BVJ6 771 aaKnown RBP20.82■□□□□ 0.92
NELFCD-201ENST00000460601 USP42Q9H9J4 1324 aaKnown RBP20.82■□□□□ 0.92
NELFCD-201ENST00000460601 CDHR2Q9BYE9 1310 aa20.81■□□□□ 0.92
NELFCD-201ENST00000460601 SASH1O94885 1247 aa20.81■□□□□ 0.92
NELFCD-201ENST00000460601 SH3TC1Q8TE82 1336 aa20.8■□□□□ 0.92
NELFCD-201ENST00000460601 RAB11FIP3O75154 756 aa20.8■□□□□ 0.92
NELFCD-201ENST00000460601 PARP10Q53GL7 1025 aa20.8■□□□□ 0.92
NELFCD-201ENST00000460601 KIF1BPQ96EK5 621 aa20.8■□□□□ 0.92
NELFCD-201ENST00000460601 PLA2G12BQ9BX93 195 aa20.8■□□□□ 0.92
NELFCD-201ENST00000460601 EN1Q05925 392 aaPredicted RBP20.8■□□□□ 0.92
NELFCD-201ENST00000460601 BACH2Q9BYV9 841 aa20.8■□□□□ 0.92
NELFCD-201ENST00000460601 COPRSQ9NQ92 184 aa20.8■□□□□ 0.92
NELFCD-201ENST00000460601 CTSWP56202 376 aa20.79■□□□□ 0.92
NELFCD-201ENST00000460601 TTLL11Q8NHH1 800 aa20.79■□□□□ 0.92
NELFCD-201ENST00000460601 GREM2Q9H772 168 aa20.79■□□□□ 0.92
NELFCD-201ENST00000460601 GSPT1P15170 499 aaKnown RBP20.78■□□□□ 0.92
NELFCD-201ENST00000460601 G3BP1Q13283 466 aaKnown RBP eCLIP20.78■□□□□ 0.927e-8■■■□□ 15.6
NELFCD-201ENST00000460601 EZH2Q15910 746 aaKnown RBP20.78■□□□□ 0.92
NELFCD-201ENST00000460601 CCDC24Q8N4L8 307 aa20.78■□□□□ 0.92
NELFCD-201ENST00000460601 SALL3Q9BXA9 1300 aa20.78■□□□□ 0.92
NELFCD-201ENST00000460601 CSF1RP07333 972 aa20.78■□□□□ 0.92
NELFCD-201ENST00000460601 HSP90AB4PQ58FF6 505 aa20.78■□□□□ 0.92
NELFCD-201ENST00000460601 TFCP2L1Q9NZI6 479 aa20.78■□□□□ 0.92
NELFCD-201ENST00000460601 ERFEQ4G0M1 354 aa20.77■□□□□ 0.92
NELFCD-201ENST00000460601 DDX60Q8IY21 1712 aaKnown RBP20.77■□□□□ 0.92
NELFCD-201ENST00000460601 PDE8AO60658 829 aa20.77■□□□□ 0.91
NELFCD-201ENST00000460601 SSFA2P28290 1259 aa20.77■□□□□ 0.91
NELFCD-201ENST00000460601 LRRC24Q50LG9 513 aa20.77■□□□□ 0.91
NELFCD-201ENST00000460601 SETDB2Q96T68 719 aa20.77■□□□□ 0.91
NELFCD-201ENST00000460601 PUS3Q9BZE2 481 aaKnown RBP20.77■□□□□ 0.91
NELFCD-201ENST00000460601 MYH3P11055 1940 aa20.76■□□□□ 0.91
NELFCD-201ENST00000460601 ADRA2BP18089 450 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms