RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 HSP90AB3PQ58FF7 597 aa24.57■■□□□ 1.52
COL5A1-203ENST00000460264 CCDC93Q567U6 631 aa24.56■■□□□ 1.52
COL5A1-203ENST00000460264 ALDH1B1P30837 517 aa24.55■■□□□ 1.52
COL5A1-203ENST00000460264 CCDC27Q2M243 656 aa24.55■■□□□ 1.52
COL5A1-203ENST00000460264 UTP14AQ9BVJ6 771 aaKnown RBP24.55■■□□□ 1.52
COL5A1-203ENST00000460264 TCIRG1Q13488 830 aa24.54■■□□□ 1.52
COL5A1-203ENST00000460264 NLRP10Q86W26 655 aa24.54■■□□□ 1.52
COL5A1-203ENST00000460264 RPGRQ92834 1020 aaKnown RBP24.54■■□□□ 1.52
COL5A1-203ENST00000460264 HYPKQ9NX55 129 aa24.54■■□□□ 1.52
COL5A1-203ENST00000460264 RNF123Q5XPI4 1314 aa24.54■■□□□ 1.52
COL5A1-203ENST00000460264 TOMM70O94826 608 aa24.53■■□□□ 1.52
COL5A1-203ENST00000460264 HOXA10P31260 410 aaPredicted RBP24.53■■□□□ 1.52
COL5A1-203ENST00000460264 OLFM4Q6UX06 510 aa24.53■■□□□ 1.52
COL5A1-203ENST00000460264 C3orf67Q6ZVT6 689 aa24.53■■□□□ 1.52
COL5A1-203ENST00000460264 PLBD2Q8NHP8 589 aa24.53■■□□□ 1.52
COL5A1-203ENST00000460264 SNED1Q8TER0 1413 aa24.52■■□□□ 1.52
COL5A1-203ENST00000460264 GLTPD2A6NH11 291 aa24.52■■□□□ 1.52
COL5A1-203ENST00000460264 C8orf58Q8NAV2 365 aa24.52■■□□□ 1.52
COL5A1-203ENST00000460264 DDX60Q8IY21 1712 aaKnown RBP24.52■■□□□ 1.52
COL5A1-203ENST00000460264 WDR90Q96KV7 1748 aa24.52■■□□□ 1.52
COL5A1-203ENST00000460264 ELL2O00472 640 aaPredicted RBP24.51■■□□□ 1.51
COL5A1-203ENST00000460264 SLC10A5Q5PT55 438 aa24.51■■□□□ 1.51
COL5A1-203ENST00000460264 ANKRD13DQ6ZTN6 518 aa24.51■■□□□ 1.51
COL5A1-203ENST00000460264 WWC1Q8IX03 1113 aa24.51■■□□□ 1.51
COL5A1-203ENST00000460264 RRAGCQ9HB90 399 aa24.51■■□□□ 1.51
COL5A1-203ENST00000460264 CEP350Q5VT06 3117 aa24.5■■□□□ 1.51
COL5A1-203ENST00000460264 HSPA6P17066 643 aa24.49■■□□□ 1.51
COL5A1-203ENST00000460264 FKBP4Q02790 459 aaKnown RBP eCLIP24.49■■□□□ 1.51
COL5A1-203ENST00000460264 NCBP3Q53F19 620 aaKnown RBP24.49■■□□□ 1.51
COL5A1-203ENST00000460264 C16orf71Q8IYS4 520 aaPredicted RBP24.49■■□□□ 1.51
COL5A1-203ENST00000460264 RTKN2Q8IZC4 609 aa24.49■■□□□ 1.51
COL5A1-203ENST00000460264 TSR2Q969E8 191 aaKnown RBP24.49■■□□□ 1.51
COL5A1-203ENST00000460264 NLRP3Q96P20 1036 aa24.49■■□□□ 1.51
COL5A1-203ENST00000460264 CRAMP1Q96RY5 1269 aa24.49■■□□□ 1.51
COL5A1-203ENST00000460264 RBM46Q8TBY0 533 aaKnown RBP24.48■■□□□ 1.51
COL5A1-203ENST00000460264 SH3TC1Q8TE82 1336 aa24.47■■□□□ 1.51
COL5A1-203ENST00000460264 RBM17Q96I25 401 aaKnown RBP24.47■■□□□ 1.51
COL5A1-203ENST00000460264 ISCA1Q9BUE6 129 aa24.47■■□□□ 1.51
COL5A1-203ENST00000460264 TRMT112Q9UI30 125 aaKnown RBP24.47■■□□□ 1.51
COL5A1-203ENST00000460264 IL16Q14005 1332 aa24.46■■□□□ 1.51
COL5A1-203ENST00000460264 SYNE4Q8N205 404 aa24.46■■□□□ 1.51
COL5A1-203ENST00000460264 TSPYL6Q8N831 410 aa24.46■■□□□ 1.51
COL5A1-203ENST00000460264 ZNF277Q9NRM2 450 aaPredicted RBP24.46■■□□□ 1.51
COL5A1-203ENST00000460264 HCLS1P14317 486 aaPredicted RBP24.45■■□□□ 1.5
COL5A1-203ENST00000460264 CC2D2BQ6DHV5 1058 aa24.45■■□□□ 1.5
COL5A1-203ENST00000460264 DPY19L2Q6NUT2 758 aa24.45■■□□□ 1.5
COL5A1-203ENST00000460264 PHAXQ9H814 394 aaKnown RBP24.45■■□□□ 1.5
COL5A1-203ENST00000460264 TAF1P21675 1872 aa24.45■■□□□ 1.5
COL5A1-203ENST00000460264 PPEF1O14829 653 aaPredicted RBP24.44■■□□□ 1.5
COL5A1-203ENST00000460264 GOLGA2Q08379 1002 aa24.44■■□□□ 1.5
COL5A1-203ENST00000460264 CCDC30Q5VVM6 783 aa24.44■■□□□ 1.5
COL5A1-203ENST00000460264 SLC51AQ86UW1 340 aa24.44■■□□□ 1.5
COL5A1-203ENST00000460264 ZNF428Q96B54 188 aa24.44■■□□□ 1.5
COL5A1-203ENST00000460264 ABCC4O15439 1325 aa24.43■■□□□ 1.5
COL5A1-203ENST00000460264 ATP5J2-PTCD1G3V325 749 aa24.43■■□□□ 1.5
COL5A1-203ENST00000460264 VEGFAP15692 232 aaPredicted RBP24.43■■□□□ 1.5
COL5A1-203ENST00000460264 PSMD1Q99460 953 aa24.43■■□□□ 1.5
COL5A1-203ENST00000460264 CHMP4AQ9BY43 222 aa24.43■■□□□ 1.5
COL5A1-203ENST00000460264 RIC3Q7Z5B4 369 aa24.42■■□□□ 1.5
COL5A1-203ENST00000460264 POTECB2RU33 542 aa24.41■■□□□ 1.5
COL5A1-203ENST00000460264 IARSP41252 1262 aaKnown RBP24.41■■□□□ 1.5
COL5A1-203ENST00000460264 TRIM28Q13263 835 aaKnown RBP24.41■■□□□ 1.5
COL5A1-203ENST00000460264 COL4A5P29400 1685 aa24.4■■□□□ 1.5
COL5A1-203ENST00000460264 FSTL1Q12841 308 aa24.4■■□□□ 1.5
COL5A1-203ENST00000460264 GRIPAP1Q4V328 841 aa24.4■■□□□ 1.5
COL5A1-203ENST00000460264 LRRC37AA6NMS7 1700 aa24.4■■□□□ 1.5
COL5A1-203ENST00000460264 SCN4AP35499 1836 aa24.4■■□□□ 1.5
COL5A1-203ENST00000460264 FANCIQ9NVI1 1328 aa24.39■■□□□ 1.5
COL5A1-203ENST00000460264 TCERG1O14776 1098 aaKnown RBP24.39■■□□□ 1.49
COL5A1-203ENST00000460264 DDNO94850 711 aaPredicted RBP24.39■■□□□ 1.49
COL5A1-203ENST00000460264 FAM89AQ96GI7 184 aa24.39■■□□□ 1.49
COL5A1-203ENST00000460264 SALL2Q9Y467 1007 aaPredicted RBP24.39■■□□□ 1.49
COL5A1-203ENST00000460264 ZNF541Q9H0D2 1346 aa24.38■■□□□ 1.49
COL5A1-203ENST00000460264 CACNA1FO60840 1977 aa24.38■■□□□ 1.49
COL5A1-203ENST00000460264 TWISTNBQ3B726 338 aaPredicted RBP24.38■■□□□ 1.49
COL5A1-203ENST00000460264 FAM9BQ8IZU0 186 aa24.38■■□□□ 1.49
COL5A1-203ENST00000460264 ATP6V0A2Q9Y487 856 aa24.38■■□□□ 1.49
COL5A1-203ENST00000460264 APLP1P51693 650 aa24.37■■□□□ 1.49
COL5A1-203ENST00000460264 WDR63Q8IWG1 891 aa24.37■■□□□ 1.49
COL5A1-203ENST00000460264 SMC1BQ8NDV3 1235 aa24.37■■□□□ 1.49
COL5A1-203ENST00000460264 DDX58O95786 925 aaKnown RBP24.36■■□□□ 1.49
COL5A1-203ENST00000460264 RTL5Q5HYW3 569 aaPredicted RBP24.36■■□□□ 1.49
COL5A1-203ENST00000460264 DDX46Q7L014 1031 aaKnown RBP24.36■■□□□ 1.49
COL5A1-203ENST00000460264 MYD88Q99836 296 aa24.36■■□□□ 1.49
COL5A1-203ENST00000460264 STK31Q9BXU1 1019 aa24.36■■□□□ 1.49
COL5A1-203ENST00000460264 COL4A1P02462 1669 aa24.35■■□□□ 1.49
COL5A1-203ENST00000460264 FZD9O00144 591 aa24.35■■□□□ 1.49
COL5A1-203ENST00000460264 BBOX1O75936 387 aa24.35■■□□□ 1.49
COL5A1-203ENST00000460264 GRAPQ13588 217 aa24.35■■□□□ 1.49
COL5A1-203ENST00000460264 GRAPLQ8TC17 118 aaPredicted RBP24.35■■□□□ 1.49
COL5A1-203ENST00000460264 L3MBTL3Q96JM7 780 aaPredicted RBP24.35■■□□□ 1.49
COL5A1-203ENST00000460264 METTL22Q9BUU2 404 aaPredicted RBP24.34■■□□□ 1.49
COL5A1-203ENST00000460264 TMX4Q9H1E5 349 aaPredicted RBP24.34■■□□□ 1.49
COL5A1-203ENST00000460264 IRS4O14654 1257 aaPredicted RBP24.33■■□□□ 1.49
COL5A1-203ENST00000460264 SF3B3Q15393 1217 aaKnown RBP24.33■■□□□ 1.49
COL5A1-203ENST00000460264 ZBTB38Q8NAP3 1195 aaPredicted RBP24.33■■□□□ 1.49
COL5A1-203ENST00000460264 CCDC191Q8NCU4 936 aa24.33■■□□□ 1.49
COL5A1-203ENST00000460264 JDP2Q8WYK2 163 aa24.33■■□□□ 1.49
COL5A1-203ENST00000460264 MAP3K2Q9Y2U5 619 aa24.33■■□□□ 1.49
COL5A1-203ENST00000460264 KSR2Q6VAB6 950 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms