RNA–Protein interactions for RNA: ENST00000458642.5

HDAC11-216, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-216ENST00000458642 CNTNAP1P78357 1384 aa24.52■■□□□ 1.52
HDAC11-216ENST00000458642 LTBP1Q14766 1721 aa24.52■■□□□ 1.52
HDAC11-216ENST00000458642 TCERG1O14776 1098 aaKnown RBP24.51■■□□□ 1.51
HDAC11-216ENST00000458642 CLEC11AQ9Y240 323 aa24.51■■□□□ 1.51
HDAC11-216ENST00000458642 NTSR2O95665 410 aa24.5■■□□□ 1.51
HDAC11-216ENST00000458642 ZNF34Q8IZ26 560 aa24.5■■□□□ 1.51
HDAC11-216ENST00000458642 RPGRQ92834 1020 aaKnown RBP24.5■■□□□ 1.51
HDAC11-216ENST00000458642 PSMD1Q99460 953 aa24.5■■□□□ 1.51
HDAC11-216ENST00000458642 MAPK8IP3Q9UPT6 1336 aa24.5■■□□□ 1.51
HDAC11-216ENST00000458642 ANXA1P04083 346 aa24.49■■□□□ 1.51
HDAC11-216ENST00000458642 HOXA10P31260 410 aaPredicted RBP24.49■■□□□ 1.51
HDAC11-216ENST00000458642 PROSER3Q2NL68 480 aa24.49■■□□□ 1.51
HDAC11-216ENST00000458642 MAP1SQ66K74 1059 aaPredicted RBP24.49■■□□□ 1.51
HDAC11-216ENST00000458642 LRP10Q7Z4F1 713 aa24.49■■□□□ 1.51
HDAC11-216ENST00000458642 IBTKQ9P2D0 1353 aaPredicted RBP24.49■■□□□ 1.51
HDAC11-216ENST00000458642 RIC1Q4ADV7 1423 aa24.49■■□□□ 1.51
HDAC11-216ENST00000458642 PDIA6Q15084 440 aa24.48■■□□□ 1.51
HDAC11-216ENST00000458642 TSPYL4Q9UJ04 414 aa24.48■■□□□ 1.51
HDAC11-216ENST00000458642 GIGYF2Q6Y7W6 1299 aaKnown RBP24.47■■□□□ 1.51
HDAC11-216ENST00000458642 GPC2Q8N158 579 aa24.47■■□□□ 1.51
HDAC11-216ENST00000458642 GJA3Q9Y6H8 435 aa24.47■■□□□ 1.51
HDAC11-216ENST00000458642 TMEM88BA6NKF7 163 aa24.46■■□□□ 1.51
HDAC11-216ENST00000458642 FOXN1O15353 648 aa24.46■■□□□ 1.51
HDAC11-216ENST00000458642 EIF2S2P20042 333 aaKnown RBP24.46■■□□□ 1.51
HDAC11-216ENST00000458642 VEGFBP49765 207 aa24.46■■□□□ 1.51
HDAC11-216ENST00000458642 JDP2Q8WYK2 163 aa24.46■■□□□ 1.51
HDAC11-216ENST00000458642 PPEF1O14829 653 aaPredicted RBP24.45■■□□□ 1.5
HDAC11-216ENST00000458642 CNTROBQ8N137 903 aa24.45■■□□□ 1.5
HDAC11-216ENST00000458642 RIPK4P57078 832 aa24.44■■□□□ 1.5
HDAC11-216ENST00000458642 FMR1Q06787 632 aaKnown RBP eCLIP24.44■■□□□ 1.5
HDAC11-216ENST00000458642 NECTIN2Q92692 538 aa24.44■■□□□ 1.5
HDAC11-216ENST00000458642 ERBB4Q15303 1308 aa24.43■■□□□ 1.5
HDAC11-216ENST00000458642 CC2D2BQ6DHV5 1058 aa24.43■■□□□ 1.5
HDAC11-216ENST00000458642 LARGE2Q8N3Y3 721 aa24.43■■□□□ 1.5
HDAC11-216ENST00000458642 RBM17Q96I25 401 aaKnown RBP24.43■■□□□ 1.5
HDAC11-216ENST00000458642 CRAMP1Q96RY5 1269 aa24.43■■□□□ 1.5
HDAC11-216ENST00000458642 SCNN1DP51172 638 aa24.42■■□□□ 1.5
HDAC11-216ENST00000458642 EIF6P56537 245 aaKnown RBP24.42■■□□□ 1.5
HDAC11-216ENST00000458642 PNMA8AQ86V59 439 aaPredicted RBP24.42■■□□□ 1.5
HDAC11-216ENST00000458642 LAMB2P55268 1798 aa24.42■■□□□ 1.5
HDAC11-216ENST00000458642 EPS15P42566 896 aa24.41■■□□□ 1.5
HDAC11-216ENST00000458642 ZNF428Q96B54 188 aa24.41■■□□□ 1.5
HDAC11-216ENST00000458642 ANKRD36CQ5JPF3 1778 aa24.4■■□□□ 1.5
HDAC11-216ENST00000458642 KRT24Q2M2I5 525 aa24.4■■□□□ 1.5
HDAC11-216ENST00000458642 PPP1R42Q7Z4L9 355 aa24.4■■□□□ 1.5
HDAC11-216ENST00000458642 PNNQ9H307 717 aaKnown RBP24.4■■□□□ 1.5
HDAC11-216ENST00000458642 ABCC4O15439 1325 aa24.39■■□□□ 1.5
HDAC11-216ENST00000458642 TMPOP42166 694 aaKnown RBP24.39■■□□□ 1.49
HDAC11-216ENST00000458642 AOC3Q16853 763 aa24.39■■□□□ 1.49
HDAC11-216ENST00000458642 PARP10Q53GL7 1025 aa24.39■■□□□ 1.49
HDAC11-216ENST00000458642 UTP14AQ9BVJ6 771 aaKnown RBP24.39■■□□□ 1.49
HDAC11-216ENST00000458642 AIMP1Q12904 312 aaKnown RBP24.38■■□□□ 1.49
HDAC11-216ENST00000458642 NLRP3Q96P20 1036 aa24.38■■□□□ 1.49
HDAC11-216ENST00000458642 PPIP5K2O43314 1243 aa24.37■■□□□ 1.49
HDAC11-216ENST00000458642 COPS6Q7L5N1 327 aa24.37■■□□□ 1.49
HDAC11-216ENST00000458642 CCDC146Q8IYE0 955 aa24.37■■□□□ 1.49
HDAC11-216ENST00000458642 XAGE3Q8WTP9 111 aa24.37■■□□□ 1.49
HDAC11-216ENST00000458642 TAF1P21675 1872 aa24.36■■□□□ 1.49
HDAC11-216ENST00000458642 RASSF10A6NK89 507 aa24.36■■□□□ 1.49
HDAC11-216ENST00000458642 HCLS1P14317 486 aaPredicted RBP24.36■■□□□ 1.49
HDAC11-216ENST00000458642 LMOD1P29536 600 aaPredicted RBP24.36■■□□□ 1.49
HDAC11-216ENST00000458642 SLC10A5Q5PT55 438 aa24.36■■□□□ 1.49
HDAC11-216ENST00000458642 NIM1KQ8IY84 436 aa24.36■■□□□ 1.49
HDAC11-216ENST00000458642 ATP6V0A2Q9Y487 856 aa24.36■■□□□ 1.49
HDAC11-216ENST00000458642 TRAF5O00463 557 aa24.35■■□□□ 1.49
HDAC11-216ENST00000458642 NEUROD2Q15784 382 aa24.35■■□□□ 1.49
HDAC11-216ENST00000458642 DEFB115Q30KQ5 88 aa24.35■■□□□ 1.49
HDAC11-216ENST00000458642 NLRP10Q86W26 655 aa24.35■■□□□ 1.49
HDAC11-216ENST00000458642 DDX21Q9NR30 783 aaKnown RBP eCLIP24.35■■□□□ 1.49
HDAC11-216ENST00000458642 GRIPAP1Q4V328 841 aa24.34■■□□□ 1.49
HDAC11-216ENST00000458642 WBP1LQ9NX94 342 aa24.34■■□□□ 1.49
HDAC11-216ENST00000458642 ABT1Q9ULW3 272 aaKnown RBP24.34■■□□□ 1.49
HDAC11-216ENST00000458642 AIDAQ96BJ3 306 aa24.32■■□□□ 1.48
HDAC11-216ENST00000458642 CTCFP49711 727 aaPredicted RBP24.31■■□□□ 1.48
HDAC11-216ENST00000458642 LBX1P52954 281 aa24.31■■□□□ 1.48
HDAC11-216ENST00000458642 CXCL9Q07325 125 aa24.31■■□□□ 1.48
HDAC11-216ENST00000458642 RALBP1Q15311 655 aa24.31■■□□□ 1.48
HDAC11-216ENST00000458642 PRDM10Q9NQV6 1147 aa24.31■■□□□ 1.48
HDAC11-216ENST00000458642 BABAM1Q9NWV8 329 aa24.31■■□□□ 1.48
HDAC11-216ENST00000458642 WDR33Q9C0J8 1336 aaKnown RBP24.31■■□□□ 1.48
HDAC11-216ENST00000458642 COL4A1P02462 1669 aa24.3■■□□□ 1.48
HDAC11-216ENST00000458642 DUOX1Q9NRD9 1551 aa24.3■■□□□ 1.48
HDAC11-216ENST00000458642 TCIRG1Q13488 830 aa24.3■■□□□ 1.48
HDAC11-216ENST00000458642 CST9Q5W186 159 aa24.3■■□□□ 1.48
HDAC11-216ENST00000458642 RTFDC1Q9BY42 306 aaPredicted RBP24.3■■□□□ 1.48
HDAC11-216ENST00000458642 GPRC5DQ9NZD1 345 aa24.3■■□□□ 1.48
HDAC11-216ENST00000458642 CHPF2Q9P2E5 772 aa24.3■■□□□ 1.48
HDAC11-216ENST00000458642 TRMT112Q9UI30 125 aaKnown RBP24.3■■□□□ 1.48
HDAC11-216ENST00000458642 TRIM35Q9UPQ4 493 aa24.3■■□□□ 1.48
HDAC11-216ENST00000458642 LAS1LQ9Y4W2 734 aaKnown RBP24.3■■□□□ 1.48
HDAC11-216ENST00000458642 CHL1O00533 1208 aa24.29■■□□□ 1.48
HDAC11-216ENST00000458642 LMOD3Q0VAK6 560 aa24.29■■□□□ 1.48
HDAC11-216ENST00000458642 DPP8Q6V1X1 898 aaPredicted RBP24.29■■□□□ 1.48
HDAC11-216ENST00000458642 USP50Q70EL3 339 aaPredicted RBP24.29■■□□□ 1.48
HDAC11-216ENST00000458642 ZNRF3Q9ULT6 936 aa24.29■■□□□ 1.48
HDAC11-216ENST00000458642 DDX60Q8IY21 1712 aaKnown RBP24.29■■□□□ 1.48
HDAC11-216ENST00000458642 GMPSP49915 693 aaPredicted RBP24.28■■□□□ 1.48
HDAC11-216ENST00000458642 SP8Q8IXZ3 490 aa24.28■■□□□ 1.48
HDAC11-216ENST00000458642 TRPM7Q96QT4 1865 aa24.28■■□□□ 1.48
HDAC11-216ENST00000458642 THSD7BQ9C0I4 1608 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms