RNA–Protein interactions for RNA: ENST00000455841.6

GTF2IRD1-203, Transcript of GTF2I repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-203ENST00000455841 STAP2Q9UGK3 403 aa18.46■□□□□ 0.55
GTF2IRD1-203ENST00000455841 OVOS2A0A0G2JMS6 1433 aa18.46■□□□□ 0.55
GTF2IRD1-203ENST00000455841 STARD3NLO95772 234 aa18.46■□□□□ 0.55
GTF2IRD1-203ENST00000455841 FKBP4Q02790 459 aaKnown RBP eCLIP18.46■□□□□ 0.55
GTF2IRD1-203ENST00000455841 DDB1Q16531 1140 aa18.46■□□□□ 0.55
GTF2IRD1-203ENST00000455841 NGLY1Q96IV0 654 aa18.46■□□□□ 0.55
GTF2IRD1-203ENST00000455841 NMIQ13287 307 aaPredicted RBP18.46■□□□□ 0.55
GTF2IRD1-203ENST00000455841 HLFQ16534 295 aa18.46■□□□□ 0.55
GTF2IRD1-203ENST00000455841 RASEFQ8IZ41 740 aa18.46■□□□□ 0.55
GTF2IRD1-203ENST00000455841 ATG3Q9NT62 314 aa18.46■□□□□ 0.55
GTF2IRD1-203ENST00000455841 PPFIA3O75145 1194 aa18.45■□□□□ 0.54
GTF2IRD1-203ENST00000455841 CASTP20810 708 aaKnown RBP18.45■□□□□ 0.54
GTF2IRD1-203ENST00000455841 PTPN12Q05209 780 aaKnown RBP18.45■□□□□ 0.54
GTF2IRD1-203ENST00000455841 FAM98CQ17RN3 349 aaKnown RBP18.45■□□□□ 0.54
GTF2IRD1-203ENST00000455841 BICDL1Q6ZP65 573 aa18.45■□□□□ 0.54
GTF2IRD1-203ENST00000455841 JAKMIP1Q96N16 626 aaKnown RBP18.45■□□□□ 0.54
GTF2IRD1-203ENST00000455841 SEC62Q99442 399 aaKnown RBP18.45■□□□□ 0.54
GTF2IRD1-203ENST00000455841 CCDC57Q2TAC2 916 aa18.44■□□□□ 0.54
GTF2IRD1-203ENST00000455841 TMX3Q96JJ7 454 aa18.44■□□□□ 0.54
GTF2IRD1-203ENST00000455841 LMO7Q8WWI1 1683 aa18.44■□□□□ 0.54
GTF2IRD1-203ENST00000455841 GBP4Q96PP9 640 aa18.44■□□□□ 0.54
GTF2IRD1-203ENST00000455841 DBNLQ9UJU6 430 aaKnown RBP18.44■□□□□ 0.54
GTF2IRD1-203ENST00000455841 CACNA1FO60840 1977 aa18.44■□□□□ 0.54
GTF2IRD1-203ENST00000455841 GOLIM4O00461 696 aa18.44■□□□□ 0.54
GTF2IRD1-203ENST00000455841 HELBQ8NG08 1087 aaPredicted RBP18.44■□□□□ 0.54
GTF2IRD1-203ENST00000455841 STRCQ7RTU9 1775 aa18.43■□□□□ 0.54
GTF2IRD1-203ENST00000455841 SGSM2O43147 1006 aa18.43■□□□□ 0.54
GTF2IRD1-203ENST00000455841 IL27Q8NEV9 243 aa18.43■□□□□ 0.54
GTF2IRD1-203ENST00000455841 TRMT112Q9UI30 125 aaKnown RBP18.43■□□□□ 0.54
GTF2IRD1-203ENST00000455841 PHRF1Q9P1Y6 1649 aaKnown RBP18.43■□□□□ 0.54
GTF2IRD1-203ENST00000455841 A0A0D9SFI3 127 aa18.42■□□□□ 0.54
GTF2IRD1-203ENST00000455841 RUFY2Q8WXA3 655 aa18.42■□□□□ 0.54
GTF2IRD1-203ENST00000455841 KDM3BQ7LBC6 1761 aa18.42■□□□□ 0.54
GTF2IRD1-203ENST00000455841 KCNQ2O43526 872 aa18.42■□□□□ 0.54
GTF2IRD1-203ENST00000455841 STK3Q13188 491 aa18.42■□□□□ 0.54
GTF2IRD1-203ENST00000455841 TNNI3KQ59H18 835 aa18.42■□□□□ 0.54
GTF2IRD1-203ENST00000455841 LRP10Q7Z4F1 713 aa18.42■□□□□ 0.54
GTF2IRD1-203ENST00000455841 FPGT-TNNI3KV9GXZ4 949 aa18.42■□□□□ 0.54
GTF2IRD1-203ENST00000455841 NCOA3Q9Y6Q9 1424 aa18.42■□□□□ 0.54
GTF2IRD1-203ENST00000455841 ATP6V1AP38606 617 aa18.41■□□□□ 0.54
GTF2IRD1-203ENST00000455841 PXDNLA1KZ92 1463 aa18.41■□□□□ 0.54
GTF2IRD1-203ENST00000455841 FGD1P98174 961 aa18.41■□□□□ 0.54
GTF2IRD1-203ENST00000455841 GDPD2Q9HCC8 539 aa18.41■□□□□ 0.54
GTF2IRD1-203ENST00000455841 FOSBP53539 338 aa18.41■□□□□ 0.54
GTF2IRD1-203ENST00000455841 MTX1Q13505 466 aa18.41■□□□□ 0.54
GTF2IRD1-203ENST00000455841 CCDC24Q8N4L8 307 aa18.41■□□□□ 0.54
GTF2IRD1-203ENST00000455841 ADCK5Q3MIX3 580 aa18.4■□□□□ 0.54
GTF2IRD1-203ENST00000455841 DDX49Q9Y6V7 483 aaKnown RBP18.4■□□□□ 0.54
GTF2IRD1-203ENST00000455841 GOLGA6L22H0YM25 854 aa18.4■□□□□ 0.54
GTF2IRD1-203ENST00000455841 SNAP23O00161 211 aa18.4■□□□□ 0.54
GTF2IRD1-203ENST00000455841 HCLS1P14317 486 aaPredicted RBP18.4■□□□□ 0.54
GTF2IRD1-203ENST00000455841 USP54Q70EL1 1684 aa18.4■□□□□ 0.54
GTF2IRD1-203ENST00000455841 EIF5BO60841 1220 aaKnown RBP18.39■□□□□ 0.54
GTF2IRD1-203ENST00000455841 EVI5LQ96CN4 794 aa18.39■□□□□ 0.54
GTF2IRD1-203ENST00000455841 LRRC2Q9BYS8 371 aa18.39■□□□□ 0.54
GTF2IRD1-203ENST00000455841 SLC4A9Q96Q91 983 aa18.39■□□□□ 0.53
GTF2IRD1-203ENST00000455841 CNNM1Q9NRU3 951 aa18.39■□□□□ 0.53
GTF2IRD1-203ENST00000455841 NECAB1Q8N987 351 aa18.39■□□□□ 0.53
GTF2IRD1-203ENST00000455841 CEP126Q9P2H0 1117 aa18.39■□□□□ 0.53
GTF2IRD1-203ENST00000455841 SNX14Q9Y5W7 946 aa18.39■□□□□ 0.53
GTF2IRD1-203ENST00000455841 TTC41PQ6P2S7 1318 aa18.39■□□□□ 0.53
GTF2IRD1-203ENST00000455841 COL9A3Q14050 684 aaPredicted RBP18.38■□□□□ 0.53
GTF2IRD1-203ENST00000455841 XIRP1Q702N8 1843 aaKnown RBP18.38■□□□□ 0.53
GTF2IRD1-203ENST00000455841 ZNF589Q86UQ0 364 aaPredicted RBP18.38■□□□□ 0.53
GTF2IRD1-203ENST00000455841 DZIP3Q86Y13 1208 aaKnown RBP18.38■□□□□ 0.53
GTF2IRD1-203ENST00000455841 RBM8AQ9Y5S9 174 aaKnown RBP18.38■□□□□ 0.53
GTF2IRD1-203ENST00000455841 PI16Q6UXB8 463 aa18.38■□□□□ 0.53
GTF2IRD1-203ENST00000455841 PRPF40AO75400 957 aaKnown RBP18.38■□□□□ 0.53
GTF2IRD1-203ENST00000455841 WASHC4Q2M389 1173 aa18.37■□□□□ 0.53
GTF2IRD1-203ENST00000455841 CCDC83Q8IWF9 413 aa18.37■□□□□ 0.53
GTF2IRD1-203ENST00000455841 TAF6LQ9Y6J9 622 aa18.37■□□□□ 0.53
GTF2IRD1-203ENST00000455841 ZKSCAN1P17029 563 aaPredicted RBP18.37■□□□□ 0.53
GTF2IRD1-203ENST00000455841 NPHP1O15259 732 aa18.36■□□□□ 0.53
GTF2IRD1-203ENST00000455841 IFIT5Q13325 482 aaKnown RBP18.36■□□□□ 0.53
GTF2IRD1-203ENST00000455841 TCIRG1Q13488 830 aa18.36■□□□□ 0.53
GTF2IRD1-203ENST00000455841 LDHAL6AQ6ZMR3 332 aa18.36■□□□□ 0.53
GTF2IRD1-203ENST00000455841 C5P01031 1676 aa18.36■□□□□ 0.53
GTF2IRD1-203ENST00000455841 ADORA1P30542 326 aa18.36■□□□□ 0.53
GTF2IRD1-203ENST00000455841 AK2P54819 239 aa18.36■□□□□ 0.53
GTF2IRD1-203ENST00000455841 FOXO4P98177 505 aa18.36■□□□□ 0.53
GTF2IRD1-203ENST00000455841 METTL24Q5JXM2 366 aa18.36■□□□□ 0.53
GTF2IRD1-203ENST00000455841 LSG1Q9H089 658 aaKnown RBP18.36■□□□□ 0.53
GTF2IRD1-203ENST00000455841 RAB3GAP1Q15042 981 aa18.36■□□□□ 0.53
GTF2IRD1-203ENST00000455841 COL18A1P39060 1754 aa18.36■□□□□ 0.53
GTF2IRD1-203ENST00000455841 RAD50Q92878 1312 aa18.35■□□□□ 0.53
GTF2IRD1-203ENST00000455841 A0A1B0GUL7 405 aa18.35■□□□□ 0.53
GTF2IRD1-203ENST00000455841 IFIT1P09914 478 aaKnown RBP18.35■□□□□ 0.53
GTF2IRD1-203ENST00000455841 GTF2E1P29083 439 aaPredicted RBP18.35■□□□□ 0.53
GTF2IRD1-203ENST00000455841 STK11IPQ8N1F8 1099 aa18.35■□□□□ 0.53
GTF2IRD1-203ENST00000455841 CCDC191Q8NCU4 936 aa18.35■□□□□ 0.53
GTF2IRD1-203ENST00000455841 COPRSQ9NQ92 184 aa18.35■□□□□ 0.53
GTF2IRD1-203ENST00000455841 DDX11L8A8MPP1 907 aa18.35■□□□□ 0.53
GTF2IRD1-203ENST00000455841 BAG4O95429 457 aaKnown RBP18.34■□□□□ 0.53
GTF2IRD1-203ENST00000455841 RFX5P48382 616 aaPredicted RBP18.34■□□□□ 0.53
GTF2IRD1-203ENST00000455841 IQSEC3Q9UPP2 1182 aaPredicted RBP18.34■□□□□ 0.53
GTF2IRD1-203ENST00000455841 SCN11AQ9UI33 1791 aa18.34■□□□□ 0.53
GTF2IRD1-203ENST00000455841 H7C1W4 665 aa18.34■□□□□ 0.53
GTF2IRD1-203ENST00000455841 TOM1O60784 492 aa18.34■□□□□ 0.53
GTF2IRD1-203ENST00000455841 HSPA4P34932 840 aa18.34■□□□□ 0.53
GTF2IRD1-203ENST00000455841 HSP90B1P14625 803 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms