RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 TRIM50Q86XT4 487 aa5.61□□□□□ -1.51
LINC02540-201ENST00000455554 SUSD3Q96L08 255 aa5.61□□□□□ -1.51
LINC02540-201ENST00000455554 PHACTR1Q9C0D0 580 aa5.61□□□□□ -1.51
LINC02540-201ENST00000455554 TSPAN10Q9H1Z9 355 aaPredicted RBP5.61□□□□□ -1.51
LINC02540-201ENST00000455554 ALG2Q9H553 416 aa5.61□□□□□ -1.51
LINC02540-201ENST00000455554 ZBTB7BO15156 539 aaPredicted RBP5.6□□□□□ -1.51
LINC02540-201ENST00000455554 AFF1P51825 1210 aaKnown RBP5.6□□□□□ -1.51
LINC02540-201ENST00000455554 TPCN2Q8NHX9 752 aa5.6□□□□□ -1.51
LINC02540-201ENST00000455554 IGFLR1Q9H665 355 aa5.6□□□□□ -1.51
LINC02540-201ENST00000455554 USP21Q9UK80 565 aa5.6□□□□□ -1.51
LINC02540-201ENST00000455554 GRNP28799 593 aaKnown RBP5.59□□□□□ -1.51
LINC02540-201ENST00000455554 MCM6Q14566 821 aa5.59□□□□□ -1.51
LINC02540-201ENST00000455554 PSAPL1Q6NUJ1 521 aa5.59□□□□□ -1.51
LINC02540-201ENST00000455554 DMRTC2Q8IXT2 367 aaPredicted RBP5.59□□□□□ -1.51
LINC02540-201ENST00000455554 FMR1NBQ8N0W7 255 aaPredicted RBP5.59□□□□□ -1.51
LINC02540-201ENST00000455554 EFCC1Q9HA90 598 aa5.59□□□□□ -1.51
LINC02540-201ENST00000455554 ATP1A2P50993 1020 aa5.58□□□□□ -1.52
LINC02540-201ENST00000455554 CCDC102BQ68D86 513 aa5.58□□□□□ -1.52
LINC02540-201ENST00000455554 BTLAQ7Z6A9 289 aa5.58□□□□□ -1.52
LINC02540-201ENST00000455554 DNAJB12Q9NXW2 375 aaKnown RBP5.58□□□□□ -1.52
LINC02540-201ENST00000455554 BTBD11A6QL63 1104 aa5.57□□□□□ -1.52
LINC02540-201ENST00000455554 M0R2N6 131 aa5.57□□□□□ -1.52
LINC02540-201ENST00000455554 C21orf2O43822 256 aa5.57□□□□□ -1.52
LINC02540-201ENST00000455554 RGS9O75916 674 aaPredicted RBP5.57□□□□□ -1.52
LINC02540-201ENST00000455554 CLDN10P78369 228 aa5.57□□□□□ -1.52
LINC02540-201ENST00000455554 GRIK5Q16478 980 aa5.57□□□□□ -1.52
LINC02540-201ENST00000455554 HIF1AQ16665 826 aa5.57□□□□□ -1.52
LINC02540-201ENST00000455554 GAS2L2Q8NHY3 880 aa5.57□□□□□ -1.52
LINC02540-201ENST00000455554 MEGF10Q96KG7 1140 aa5.57□□□□□ -1.52
LINC02540-201ENST00000455554 GOLGA2P5Q9HBQ8 144 aa5.57□□□□□ -1.52
LINC02540-201ENST00000455554 COG6Q9Y2V7 657 aa5.57□□□□□ -1.52
LINC02540-201ENST00000455554 PPP1R12BO60237 982 aaPredicted RBP5.56□□□□□ -1.52
LINC02540-201ENST00000455554 NOS3P29474 1203 aa5.56□□□□□ -1.52
LINC02540-201ENST00000455554 PLEKHM2Q8IWE5 1019 aa5.56□□□□□ -1.52
LINC02540-201ENST00000455554 WWC1Q8IX03 1113 aa5.56□□□□□ -1.52
LINC02540-201ENST00000455554 ALDH16A1Q8IZ83 802 aa5.56□□□□□ -1.52
LINC02540-201ENST00000455554 ADAMTS19Q8TE59 1207 aa5.56□□□□□ -1.52
LINC02540-201ENST00000455554 PNMA5Q96PV4 448 aa5.56□□□□□ -1.52
LINC02540-201ENST00000455554 RNF112Q9ULX5 631 aa5.56□□□□□ -1.52
LINC02540-201ENST00000455554 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.56□□□□□ -1.52
LINC02540-201ENST00000455554 IREB2P48200 963 aaKnown RBP5.55□□□□□ -1.52
LINC02540-201ENST00000455554 DTWD1Q8N5C7 304 aa5.55□□□□□ -1.52
LINC02540-201ENST00000455554 WFDC12Q8WWY7 111 aa5.55□□□□□ -1.52
LINC02540-201ENST00000455554 GSX2Q9BZM3 304 aa5.55□□□□□ -1.52
LINC02540-201ENST00000455554 USP17L3A6NCW0 530 aa5.54□□□□□ -1.52
LINC02540-201ENST00000455554 USP17L4A6NCW7 530 aa5.54□□□□□ -1.52
LINC02540-201ENST00000455554 PALM3A6NDB9 673 aaPredicted RBP5.54□□□□□ -1.52
LINC02540-201ENST00000455554 DKK1O94907 266 aa5.54□□□□□ -1.52
LINC02540-201ENST00000455554 NFKB1P19838 968 aa5.54□□□□□ -1.52
LINC02540-201ENST00000455554 CCINQ13939 588 aa5.54□□□□□ -1.52
LINC02540-201ENST00000455554 MSL1Q68DK7 614 aa5.54□□□□□ -1.52
LINC02540-201ENST00000455554 MCTP1Q6DN14 999 aa5.54□□□□□ -1.52
LINC02540-201ENST00000455554 USP17L2Q6R6M4 530 aa5.54□□□□□ -1.52
LINC02540-201ENST00000455554 USP17L1Q7RTZ2 530 aa5.54□□□□□ -1.52
LINC02540-201ENST00000455554 FAM35AQ86V20 835 aa5.54□□□□□ -1.52
LINC02540-201ENST00000455554 FBXO11Q86XK2 927 aa5.54□□□□□ -1.52
LINC02540-201ENST00000455554 LARGE2Q8N3Y3 721 aa5.54□□□□□ -1.52
LINC02540-201ENST00000455554 OGFOD1Q8N543 542 aa5.54□□□□□ -1.52
LINC02540-201ENST00000455554 TSEN2Q8NCE0 465 aaKnown RBP5.54□□□□□ -1.52
LINC02540-201ENST00000455554 BCS1LQ9Y276 419 aa5.54□□□□□ -1.52
LINC02540-201ENST00000455554 ZBTB42B2RXF5 422 aa5.53□□□□□ -1.52
LINC02540-201ENST00000455554 LGR5O75473 907 aa5.53□□□□□ -1.52
LINC02540-201ENST00000455554 PCSK7Q16549 785 aa5.53□□□□□ -1.52
LINC02540-201ENST00000455554 IER5Q5VY09 327 aa5.53□□□□□ -1.52
LINC02540-201ENST00000455554 STAG2Q8N3U4 1231 aa5.53□□□□□ -1.52
LINC02540-201ENST00000455554 POM121Q96HA1 1249 aa5.53□□□□□ -1.52
LINC02540-201ENST00000455554 NGLY1Q96IV0 654 aa5.53□□□□□ -1.52
LINC02540-201ENST00000455554 LPIN3Q9BQK8 851 aa5.53□□□□□ -1.52
LINC02540-201ENST00000455554 FRRS1LQ9P0K9 344 aa5.53□□□□□ -1.52
LINC02540-201ENST00000455554 POM121CA8CG34 1229 aa5.52□□□□□ -1.53
LINC02540-201ENST00000455554 DEAF1O75398 565 aaPredicted RBP5.52□□□□□ -1.53
LINC02540-201ENST00000455554 CPB1P15086 417 aa5.52□□□□□ -1.53
LINC02540-201ENST00000455554 IGF2-ASQ6U949 168 aa5.52□□□□□ -1.53
LINC02540-201ENST00000455554 SIX5Q8N196 739 aa5.52□□□□□ -1.53
LINC02540-201ENST00000455554 UCN2Q96RP3 112 aa5.52□□□□□ -1.53
LINC02540-201ENST00000455554 C2orf49Q9BVC5 232 aaPredicted RBP5.52□□□□□ -1.53
LINC02540-201ENST00000455554 ZFATQ9P243 1243 aa5.52□□□□□ -1.53
LINC02540-201ENST00000455554 RBM19Q9Y4C8 960 aaKnown RBP5.52□□□□□ -1.53
LINC02540-201ENST00000455554 ATAD2Q6PL18 1390 aa5.52□□□□□ -1.53
LINC02540-201ENST00000455554 TGFBR3LH3BV60 316 aa5.51□□□□□ -1.53
LINC02540-201ENST00000455554 ALX3O95076 343 aa5.51□□□□□ -1.53
LINC02540-201ENST00000455554 MAP3K6O95382 1288 aa5.51□□□□□ -1.53
LINC02540-201ENST00000455554 MED26O95402 600 aa5.51□□□□□ -1.53
LINC02540-201ENST00000455554 EPB42P16452 691 aa5.51□□□□□ -1.53
LINC02540-201ENST00000455554 MLLT1Q03111 559 aaPredicted RBP5.51□□□□□ -1.53
LINC02540-201ENST00000455554 PERM1Q5SV97 790 aa5.51□□□□□ -1.53
LINC02540-201ENST00000455554 PRR23CQ6ZRP0 262 aa5.51□□□□□ -1.53
LINC02540-201ENST00000455554 WFDC8Q8IUA0 241 aa5.51□□□□□ -1.53
LINC02540-201ENST00000455554 SCG3Q8WXD2 468 aaKnown RBP5.51□□□□□ -1.53
LINC02540-201ENST00000455554 ZNF594Q96JF6 807 aaPredicted RBP5.51□□□□□ -1.53
LINC02540-201ENST00000455554 MKRN1Q9UHC7 482 aaKnown RBP5.51□□□□□ -1.53
LINC02540-201ENST00000455554 DMGDHQ9UI17 866 aaKnown RBP5.51□□□□□ -1.53
LINC02540-201ENST00000455554 ATP9BO43861 1147 aa5.5□□□□□ -1.53
LINC02540-201ENST00000455554 SSTR4P31391 388 aa5.5□□□□□ -1.53
LINC02540-201ENST00000455554 RTN1Q16799 776 aa5.5□□□□□ -1.53
LINC02540-201ENST00000455554 ELMSAN1Q6PJG2 1045 aa5.5□□□□□ -1.53
LINC02540-201ENST00000455554 CHMP7Q8WUX9 453 aaPredicted RBP5.5□□□□□ -1.53
LINC02540-201ENST00000455554 PCMTD2Q9NV79 361 aa5.5□□□□□ -1.53
LINC02540-201ENST00000455554 DHX32Q7L7V1 743 aaKnown RBP5.49□□□□□ -1.53
LINC02540-201ENST00000455554 KRT25Q7Z3Z0 450 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms