RNA–Protein interactions for RNA: ENST00000454108.5

CALD1-212, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 558 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-212ENST00000454108 GIGYF2Q6Y7W6 1299 aaKnown RBP20.65■□□□□ 0.9
CALD1-212ENST00000454108 ZNF34Q8IZ26 560 aa20.65■□□□□ 0.9
CALD1-212ENST00000454108 LAMB2P55268 1798 aa20.64■□□□□ 0.9
CALD1-212ENST00000454108 FZD9O00144 591 aa20.64■□□□□ 0.89
CALD1-212ENST00000454108 NTSR2O95665 410 aa20.64■□□□□ 0.89
CALD1-212ENST00000454108 HOXA10P31260 410 aaPredicted RBP20.64■□□□□ 0.89
CALD1-212ENST00000454108 LMOD3Q0VAK6 560 aa20.64■□□□□ 0.89
CALD1-212ENST00000454108 RALBP1Q15311 655 aa20.64■□□□□ 0.89
CALD1-212ENST00000454108 JDP2Q8WYK2 163 aa20.64■□□□□ 0.89
CALD1-212ENST00000454108 RNF123Q5XPI4 1314 aa20.63■□□□□ 0.89
CALD1-212ENST00000454108 PASKQ96RG2 1323 aa20.63■□□□□ 0.89
CALD1-212ENST00000454108 EIF2S2P20042 333 aaKnown RBP20.63■□□□□ 0.89
CALD1-212ENST00000454108 EPHX2P34913 555 aa20.63■□□□□ 0.89
CALD1-212ENST00000454108 PPP1R42Q7Z4L9 355 aa20.63■□□□□ 0.89
CALD1-212ENST00000454108 RBM17Q96I25 401 aaKnown RBP20.63■□□□□ 0.89
CALD1-212ENST00000454108 MKRN1Q9UHC7 482 aaKnown RBP20.63■□□□□ 0.89
CALD1-212ENST00000454108 COL4A5P29400 1685 aa20.63■□□□□ 0.89
CALD1-212ENST00000454108 PPEF1O14829 653 aaPredicted RBP20.62■□□□□ 0.89
CALD1-212ENST00000454108 GRIPAP1Q4V328 841 aa20.62■□□□□ 0.89
CALD1-212ENST00000454108 PARP10Q53GL7 1025 aa20.62■□□□□ 0.89
CALD1-212ENST00000454108 GPC2Q8N158 579 aa20.62■□□□□ 0.89
CALD1-212ENST00000454108 BABAM1Q9NWV8 329 aa20.62■□□□□ 0.89
CALD1-212ENST00000454108 TNS4Q8IZW8 715 aa20.61■□□□□ 0.89
CALD1-212ENST00000454108 CRAMP1Q96RY5 1269 aa20.61■□□□□ 0.89
CALD1-212ENST00000454108 CLEC11AQ9Y240 323 aa20.61■□□□□ 0.89
CALD1-212ENST00000454108 CNTNAP1P78357 1384 aa20.6■□□□□ 0.89
CALD1-212ENST00000454108 TMPOP42166 694 aaKnown RBP20.6■□□□□ 0.89
CALD1-212ENST00000454108 EIF6P56537 245 aaKnown RBP20.6■□□□□ 0.89
CALD1-212ENST00000454108 PDIA6Q15084 440 aa20.6■□□□□ 0.89
CALD1-212ENST00000454108 PROSER3Q2NL68 480 aa20.6■□□□□ 0.89
CALD1-212ENST00000454108 LRP10Q7Z4F1 713 aa20.6■□□□□ 0.89
CALD1-212ENST00000454108 PNMA8AQ86V59 439 aaPredicted RBP20.6■□□□□ 0.89
CALD1-212ENST00000454108 LTBP1Q14766 1721 aa20.59■□□□□ 0.89
CALD1-212ENST00000454108 TCERG1O14776 1098 aaKnown RBP20.59■□□□□ 0.89
CALD1-212ENST00000454108 ANXA1P04083 346 aa20.59■□□□□ 0.89
CALD1-212ENST00000454108 C3orf67Q6ZVT6 689 aa20.59■□□□□ 0.89
CALD1-212ENST00000454108 NLRP3Q96P20 1036 aa20.59■□□□□ 0.89
CALD1-212ENST00000454108 UTP14AQ9BVJ6 771 aaKnown RBP20.59■□□□□ 0.89
CALD1-212ENST00000454108 TMEM88BA6NKF7 163 aa20.58■□□□□ 0.89
CALD1-212ENST00000454108 ITGBL1O95965 494 aaPredicted RBP20.58■□□□□ 0.89
CALD1-212ENST00000454108 LARGE2Q8N3Y3 721 aa20.58■□□□□ 0.89
CALD1-212ENST00000454108 GJA3Q9Y6H8 435 aa20.58■□□□□ 0.89
CALD1-212ENST00000454108 MYBBP1AQ9BQG0 1328 aaKnown RBP20.57■□□□□ 0.88
CALD1-212ENST00000454108 LMOD1P29536 600 aaPredicted RBP20.57■□□□□ 0.88
CALD1-212ENST00000454108 SLC51AQ86UW1 340 aa20.57■□□□□ 0.88
CALD1-212ENST00000454108 NECTIN2Q92692 538 aa20.57■□□□□ 0.88
CALD1-212ENST00000454108 TMX4Q9H1E5 349 aaPredicted RBP20.57■□□□□ 0.88
CALD1-212ENST00000454108 NEUROD2Q15784 382 aa20.56■□□□□ 0.88
CALD1-212ENST00000454108 HSP90AB3PQ58FF7 597 aa20.56■□□□□ 0.88
CALD1-212ENST00000454108 MAP1SQ66K74 1059 aaPredicted RBP20.56■□□□□ 0.88
CALD1-212ENST00000454108 CCDC146Q8IYE0 955 aa20.56■□□□□ 0.88
CALD1-212ENST00000454108 ABCC4O15439 1325 aa20.55■□□□□ 0.88
CALD1-212ENST00000454108 AIMP1Q12904 312 aaKnown RBP20.55■□□□□ 0.88
CALD1-212ENST00000454108 COPS6Q7L5N1 327 aa20.55■□□□□ 0.88
CALD1-212ENST00000454108 NIM1KQ8IY84 436 aa20.55■□□□□ 0.88
CALD1-212ENST00000454108 PPIP5K2O43314 1243 aa20.54■□□□□ 0.88
CALD1-212ENST00000454108 CAPN15O75808 1086 aa20.54■□□□□ 0.88
CALD1-212ENST00000454108 SLC10A5Q5PT55 438 aa20.54■□□□□ 0.88
CALD1-212ENST00000454108 CNTROBQ8N137 903 aa20.54■□□□□ 0.88
CALD1-212ENST00000454108 XAGE3Q8WTP9 111 aa20.54■□□□□ 0.88
CALD1-212ENST00000454108 ATP6V0A2Q9Y487 856 aa20.54■□□□□ 0.88
CALD1-212ENST00000454108 DDX60Q8IY21 1712 aaKnown RBP20.53■□□□□ 0.88
CALD1-212ENST00000454108 WDR43Q15061 677 aaKnown RBP eCLIP20.53■□□□□ 0.88
CALD1-212ENST00000454108 TAF1P21675 1872 aa20.53■□□□□ 0.88
CALD1-212ENST00000454108 TRPM7Q96QT4 1865 aa20.53■□□□□ 0.88
CALD1-212ENST00000454108 SCNN1DP51172 638 aa20.52■□□□□ 0.88
CALD1-212ENST00000454108 DDX10Q13206 875 aaKnown RBP20.52■□□□□ 0.88
CALD1-212ENST00000454108 AOC3Q16853 763 aa20.52■□□□□ 0.88
CALD1-212ENST00000454108 NLRP10Q86W26 655 aa20.52■□□□□ 0.88
CALD1-212ENST00000454108 RUNDC1Q96C34 613 aa20.52■□□□□ 0.88
CALD1-212ENST00000454108 DDX21Q9NR30 783 aaKnown RBP eCLIP20.52■□□□□ 0.88
CALD1-212ENST00000454108 LAS1LQ9Y4W2 734 aaKnown RBP20.52■□□□□ 0.88
CALD1-212ENST00000454108 LRRC37AA6NMS7 1700 aa20.51■□□□□ 0.87
CALD1-212ENST00000454108 CHL1O00533 1208 aa20.51■□□□□ 0.87
CALD1-212ENST00000454108 VEGFBP49765 207 aa20.51■□□□□ 0.87
CALD1-212ENST00000454108 KRT24Q2M2I5 525 aa20.51■□□□□ 0.87
CALD1-212ENST00000454108 TRMT112Q9UI30 125 aaKnown RBP20.51■□□□□ 0.87
CALD1-212ENST00000454108 HCLS1P14317 486 aaPredicted RBP20.5■□□□□ 0.87
CALD1-212ENST00000454108 EPS15P42566 896 aa20.5■□□□□ 0.87
CALD1-212ENST00000454108 TCIRG1Q13488 830 aa20.5■□□□□ 0.87
CALD1-212ENST00000454108 SUPT20HQ8NEM7 779 aa20.5■□□□□ 0.87
CALD1-212ENST00000454108 VPS33BQ9H267 617 aa20.5■□□□□ 0.87
CALD1-212ENST00000454108 CHPF2Q9P2E5 772 aa20.5■□□□□ 0.87
CALD1-212ENST00000454108 SH3TC1Q8TE82 1336 aa20.5■□□□□ 0.87
CALD1-212ENST00000454108 FOXN1O15353 648 aa20.49■□□□□ 0.87
CALD1-212ENST00000454108 HDGFL1Q5TGJ6 251 aa20.49■□□□□ 0.87
CALD1-212ENST00000454108 DPP8Q6V1X1 898 aaPredicted RBP20.49■□□□□ 0.87
CALD1-212ENST00000454108 AIDAQ96BJ3 306 aa20.49■□□□□ 0.87
CALD1-212ENST00000454108 TRIM35Q9UPQ4 493 aa20.49■□□□□ 0.87
CALD1-212ENST00000454108 RASSF10A6NK89 507 aa20.48■□□□□ 0.87
CALD1-212ENST00000454108 BBOX1O75936 387 aa20.48■□□□□ 0.87
CALD1-212ENST00000454108 USP50Q70EL3 339 aaPredicted RBP20.48■□□□□ 0.87
CALD1-212ENST00000454108 DDX46Q7L014 1031 aaKnown RBP20.48■□□□□ 0.87
CALD1-212ENST00000454108 RTFDC1Q9BY42 306 aaPredicted RBP20.48■□□□□ 0.87
CALD1-212ENST00000454108 ABT1Q9ULW3 272 aaKnown RBP20.48■□□□□ 0.87
CALD1-212ENST00000454108 HOXB7P09629 217 aa20.47■□□□□ 0.87
CALD1-212ENST00000454108 SP8Q8IXZ3 490 aa20.47■□□□□ 0.87
CALD1-212ENST00000454108 THSD7BQ9C0I4 1608 aa20.46■□□□□ 0.87
CALD1-212ENST00000454108 GRAPQ13588 217 aa20.46■□□□□ 0.87
CALD1-212ENST00000454108 DEFB115Q30KQ5 88 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms