RNA–Protein interactions for RNA: ENST00000453257.1

TRGVB-201, Transcript of T cell receptor gamma variable B (pseudogene), humanhuman

BASIC

Gene TRGVB, Length 471 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRGVB-201ENST00000453257 RTCBQ9Y3I0 505 aaKnown RBP6.66□□□□□ -1.34
TRGVB-201ENST00000453257 DCDC2BA2VCK2 349 aa6.65□□□□□ -1.34
TRGVB-201ENST00000453257 H7C1W4 665 aa6.65□□□□□ -1.34
TRGVB-201ENST00000453257 KHNYNO15037 678 aaKnown RBP6.65□□□□□ -1.34
TRGVB-201ENST00000453257 GPR182O15218 404 aa6.65□□□□□ -1.34
TRGVB-201ENST00000453257 EHHADHQ08426 723 aa6.65□□□□□ -1.34
TRGVB-201ENST00000453257 FIGNL1Q6PIW4 674 aa6.65□□□□□ -1.34
TRGVB-201ENST00000453257 NLRP8Q86W28 1048 aa6.65□□□□□ -1.34
TRGVB-201ENST00000453257 NUCKS1Q9H1E3 243 aaKnown RBP6.65□□□□□ -1.34
TRGVB-201ENST00000453257 BRD7Q9NPI1 651 aa6.65□□□□□ -1.34
TRGVB-201ENST00000453257 SENP3-EIF4A1A0A087X0R7 540 aa6.64□□□□□ -1.35
TRGVB-201ENST00000453257 C11orf95C9JLR9 678 aaPredicted RBP6.64□□□□□ -1.35
TRGVB-201ENST00000453257 E9PSI1 815 aa6.64□□□□□ -1.35
TRGVB-201ENST00000453257 OPLAHO14841 1288 aa6.64□□□□□ -1.35
TRGVB-201ENST00000453257 ATXN7O15265 892 aaPredicted RBP6.64□□□□□ -1.35
TRGVB-201ENST00000453257 P4HBP07237 508 aaKnown RBP6.64□□□□□ -1.35
TRGVB-201ENST00000453257 INPP5BP32019 993 aa6.64□□□□□ -1.35
TRGVB-201ENST00000453257 ATP2B2Q01814 1243 aa6.64□□□□□ -1.35
TRGVB-201ENST00000453257 TYRO3Q06418 890 aa6.64□□□□□ -1.35
TRGVB-201ENST00000453257 ZNF438Q7Z4V0 828 aa6.64□□□□□ -1.35
TRGVB-201ENST00000453257 GJD3Q8N144 294 aa6.64□□□□□ -1.35
TRGVB-201ENST00000453257 CCDC155Q8N6L0 562 aa6.64□□□□□ -1.35
TRGVB-201ENST00000453257 TRIM47Q96LD4 638 aa6.64□□□□□ -1.35
TRGVB-201ENST00000453257 FAM129BQ96TA1 746 aa6.64□□□□□ -1.35
TRGVB-201ENST00000453257 ZCCHC2Q9C0B9 1178 aaKnown RBP6.64□□□□□ -1.35
TRGVB-201ENST00000453257 DMGDHQ9UI17 866 aaKnown RBP6.64□□□□□ -1.35
TRGVB-201ENST00000453257 RBM47A0AV96 593 aaKnown RBP6.63□□□□□ -1.35
TRGVB-201ENST00000453257 CDC14CA4D256 554 aa6.63□□□□□ -1.35
TRGVB-201ENST00000453257 TREHO43280 583 aa6.63□□□□□ -1.35
TRGVB-201ENST00000453257 XYLBO75191 536 aa6.63□□□□□ -1.35
TRGVB-201ENST00000453257 GGNBP2Q9H3C7 697 aa6.63□□□□□ -1.35
TRGVB-201ENST00000453257 PNMA6FA0A0J9YX94 578 aa6.62□□□□□ -1.35
TRGVB-201ENST00000453257 SLC35F4A4IF30 521 aa6.62□□□□□ -1.35
TRGVB-201ENST00000453257 LDHBP07195 334 aaKnown RBP6.62□□□□□ -1.35
TRGVB-201ENST00000453257 NEFLP07196 543 aa6.62□□□□□ -1.35
TRGVB-201ENST00000453257 SNRPBP14678 240 aaKnown RBP6.62□□□□□ -1.35
TRGVB-201ENST00000453257 ZNF16P17020 682 aaPredicted RBP6.62□□□□□ -1.35
TRGVB-201ENST00000453257 LBRQ14739 615 aaKnown RBP6.62□□□□□ -1.35
TRGVB-201ENST00000453257 KRT25Q7Z3Z0 450 aa6.62□□□□□ -1.35
TRGVB-201ENST00000453257 KCNH4Q9UQ05 1017 aa6.62□□□□□ -1.35
TRGVB-201ENST00000453257 XPCQ01831 940 aaPredicted RBP6.61□□□□□ -1.35
TRGVB-201ENST00000453257 TAGLNQ01995 201 aaKnown RBP6.61□□□□□ -1.35
TRGVB-201ENST00000453257 FMR1Q06787 632 aaKnown RBP eCLIP6.61□□□□□ -1.35
TRGVB-201ENST00000453257 ORC1Q13415 861 aa6.61□□□□□ -1.35
TRGVB-201ENST00000453257 COL19A1Q14993 1142 aa6.61□□□□□ -1.35
TRGVB-201ENST00000453257 TRIP4Q15650 581 aaPredicted RBP6.61□□□□□ -1.35
TRGVB-201ENST00000453257 SAMD5Q5TGI4 173 aa6.61□□□□□ -1.35
TRGVB-201ENST00000453257 GTPBP3Q969Y2 492 aaKnown RBP6.61□□□□□ -1.35
TRGVB-201ENST00000453257 PNMA5Q96PV4 448 aa6.61□□□□□ -1.35
TRGVB-201ENST00000453257 PCDHGC4Q9Y5F7 938 aa6.61□□□□□ -1.35
TRGVB-201ENST00000453257 ITGA6P23229 1130 aa6.6□□□□□ -1.35
TRGVB-201ENST00000453257 FGD1P98174 961 aa6.6□□□□□ -1.35
TRGVB-201ENST00000453257 FOXR1Q6PIV2 292 aa6.6□□□□□ -1.35
TRGVB-201ENST00000453257 TRIM22Q8IYM9 498 aa6.6□□□□□ -1.35
TRGVB-201ENST00000453257 MRRFQ96E11 262 aaKnown RBP6.6□□□□□ -1.35
TRGVB-201ENST00000453257 ABHD17AQ96GS6 310 aa6.6□□□□□ -1.35
TRGVB-201ENST00000453257 TRERF1Q96PN7 1200 aa6.6□□□□□ -1.35
TRGVB-201ENST00000453257 MRS2Q9HD23 443 aa6.6□□□□□ -1.35
TRGVB-201ENST00000453257 CUEDC1Q9NWM3 386 aaPredicted RBP6.6□□□□□ -1.35
TRGVB-201ENST00000453257 EIF1AYO14602 144 aaKnown RBP6.59□□□□□ -1.35
TRGVB-201ENST00000453257 PHACTR2O75167 634 aa6.59□□□□□ -1.35
TRGVB-201ENST00000453257 FAM157BP0CG42 384 aa6.59□□□□□ -1.35
TRGVB-201ENST00000453257 MAPTP10636 758 aaKnown RBP6.59□□□□□ -1.35
TRGVB-201ENST00000453257 SFSWAPQ12872 951 aaKnown RBP6.59□□□□□ -1.35
TRGVB-201ENST00000453257 DSC3Q14574 896 aa6.59□□□□□ -1.35
TRGVB-201ENST00000453257 DBN1Q16643 649 aa6.59□□□□□ -1.35
TRGVB-201ENST00000453257 TTC39BQ5VTQ0 682 aaPredicted RBP6.59□□□□□ -1.35
TRGVB-201ENST00000453257 PDE12Q6L8Q7 609 aaKnown RBP6.59□□□□□ -1.35
TRGVB-201ENST00000453257 FBXO33Q7Z6M2 555 aa6.59□□□□□ -1.35
TRGVB-201ENST00000453257 ALKBH8Q96BT7 664 aaKnown RBP6.59□□□□□ -1.35
TRGVB-201ENST00000453257 ELP3Q9H9T3 547 aa6.59□□□□□ -1.35
TRGVB-201ENST00000453257 FOXD3Q9UJU5 478 aaPredicted RBP6.59□□□□□ -1.35
TRGVB-201ENST00000453257 KCNMB2Q9Y691 235 aa6.59□□□□□ -1.35
TRGVB-201ENST00000453257 UNCXA6NJT0 531 aa6.58□□□□□ -1.36
TRGVB-201ENST00000453257 CPNE3O75131 537 aaKnown RBP6.58□□□□□ -1.36
TRGVB-201ENST00000453257 SASH3O75995 380 aa6.58□□□□□ -1.36
TRGVB-201ENST00000453257 CD33P20138 364 aa6.58□□□□□ -1.36
TRGVB-201ENST00000453257 SNX29Q8TEQ0 813 aa6.58□□□□□ -1.36
TRGVB-201ENST00000453257 ZNF837Q96EG3 531 aaPredicted RBP6.58□□□□□ -1.36
TRGVB-201ENST00000453257 CSRNP1Q96S65 589 aa6.58□□□□□ -1.36
TRGVB-201ENST00000453257 DUSP9Q99956 384 aaKnown RBP6.58□□□□□ -1.36
TRGVB-201ENST00000453257 MARK1Q9P0L2 795 aa6.58□□□□□ -1.36
TRGVB-201ENST00000453257 TMEM63CQ9P1W3 806 aa6.58□□□□□ -1.36
TRGVB-201ENST00000453257 WWC3Q9ULE0 1092 aa6.58□□□□□ -1.36
TRGVB-201ENST00000453257 PHF24Q9UPV7 400 aa6.58□□□□□ -1.36
TRGVB-201ENST00000453257 GPR25O00155 361 aa6.57□□□□□ -1.36
TRGVB-201ENST00000453257 BNIP3LO60238 219 aa6.57□□□□□ -1.36
TRGVB-201ENST00000453257 PRPF40AO75400 957 aaKnown RBP6.57□□□□□ -1.36
TRGVB-201ENST00000453257 TNFRSF21O75509 655 aa6.57□□□□□ -1.36
TRGVB-201ENST00000453257 IGHA2P01877 340 aa6.57□□□□□ -1.36
TRGVB-201ENST00000453257 RARAP10276 462 aa6.57□□□□□ -1.36
TRGVB-201ENST00000453257 TNP2Q05952 138 aa6.57□□□□□ -1.36
TRGVB-201ENST00000453257 CCINQ13939 588 aa6.57□□□□□ -1.36
TRGVB-201ENST00000453257 ALG1LQ6GMV1 187 aa6.57□□□□□ -1.36
TRGVB-201ENST00000453257 RAB44Q7Z6P3 723 aaPredicted RBP6.57□□□□□ -1.36
TRGVB-201ENST00000453257 NLRP13Q86W25 1043 aa6.57□□□□□ -1.36
TRGVB-201ENST00000453257 SETDB2Q96T68 719 aa6.57□□□□□ -1.36
TRGVB-201ENST00000453257 ABI2Q9NYB9 513 aaPredicted RBP6.57□□□□□ -1.36
TRGVB-201ENST00000453257 PPFIA3O75145 1194 aa6.56□□□□□ -1.36
TRGVB-201ENST00000453257 THBS1P07996 1170 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms