RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 GJC2Q5T442 439 aaPredicted RBP5.89□□□□□ -1.47
EPHA3-202ENST00000452448 KANK4Q5T7N3 995 aaPredicted RBP5.89□□□□□ -1.47
EPHA3-202ENST00000452448 TTC19Q6DKK2 380 aaPredicted RBP5.89□□□□□ -1.47
EPHA3-202ENST00000452448 KCNV1Q6PIU1 500 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 MYLK4Q86YV6 388 aaPredicted RBP5.89□□□□□ -1.47
EPHA3-202ENST00000452448 MYO1HQ8N1T3 1032 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 GOLGA6L1Q8N7Z2 621 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 NGDNQ8NEJ9 315 aaKnown RBP5.89□□□□□ -1.47
EPHA3-202ENST00000452448 TEKT1Q969V4 418 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 IQCGQ9H095 443 aaKnown RBP5.89□□□□□ -1.47
EPHA3-202ENST00000452448 BLOC1S6Q9UL45 172 aa5.89□□□□□ -1.47
EPHA3-202ENST00000452448 ZBED9Q6R2W3 1325 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 DYTNA2CJ06 578 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 GNPATO15228 680 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 MAP3K7O43318 606 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 PPFIA3O75145 1194 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 LMOD1P29536 600 aaPredicted RBP5.88□□□□□ -1.47
EPHA3-202ENST00000452448 GSCP56915 257 aaPredicted RBP5.88□□□□□ -1.47
EPHA3-202ENST00000452448 PTK7Q13308 1070 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 SCYL1Q96KG9 808 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 MMTAG2Q9BU76 263 aaKnown RBP5.88□□□□□ -1.47
EPHA3-202ENST00000452448 PPP1R12CQ9BZL4 782 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 KIAA0586Q9BVV6 1533 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 RAD50Q92878 1312 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 BOLA2-SMG1P6H3BVE0 249 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 FRAT2O75474 233 aaPredicted RBP5.88□□□□□ -1.47
EPHA3-202ENST00000452448 FCHSD2O94868 740 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 VAMP1P23763 118 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 MARSP56192 900 aaKnown RBP5.88□□□□□ -1.47
EPHA3-202ENST00000452448 SOGA3Q5TF21 947 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 AP1ARQ63HQ0 302 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 WWC2Q6AWC2 1192 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 PHLDB3Q6NSJ2 640 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 ILDR2Q71H61 639 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 TRERF1Q96PN7 1200 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.88□□□□□ -1.47
EPHA3-202ENST00000452448 YIPF2Q9BWQ6 316 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 VEZTQ9HBM0 779 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 TMEM63CQ9P1W3 806 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 NINLQ9Y2I6 1382 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 IQSEC2Q5JU85 1478 aa5.88□□□□□ -1.47
EPHA3-202ENST00000452448 FHAD1B1AJZ9 1412 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 HOXA2O43364 376 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 MYBL2P10244 700 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 STIP1P31948 543 aaKnown RBP5.87□□□□□ -1.47
EPHA3-202ENST00000452448 RFC5P40937 340 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 IRX1P78414 480 aaPredicted RBP5.87□□□□□ -1.47
EPHA3-202ENST00000452448 TRAF1Q13077 416 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 CHAF1AQ13111 956 aaPredicted RBP5.87□□□□□ -1.47
EPHA3-202ENST00000452448 CERKQ8TCT0 537 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 TATDN2Q93075 761 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 THOC1Q96FV9 657 aaKnown RBP5.87□□□□□ -1.47
EPHA3-202ENST00000452448 PANK2Q9BZ23 570 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 IFT122Q9HBG6 1241 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 CPSF2Q9P2I0 782 aaKnown RBP5.87□□□□□ -1.47
EPHA3-202ENST00000452448 N6AMT1Q9Y5N5 214 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 PLB1Q6P1J6 1458 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 TIAM1Q13009 1591 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 SETD5Q9C0A6 1442 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 SLC27A2O14975 620 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 HIP1RO75146 1068 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 HSP90AB1P08238 724 aaKnown RBP5.87□□□□□ -1.47
EPHA3-202ENST00000452448 GTF2F1P35269 517 aaKnown RBP eCLIP5.87□□□□□ -1.47
EPHA3-202ENST00000452448 MDM2Q00987 491 aaPredicted RBP5.87□□□□□ -1.47
EPHA3-202ENST00000452448 MYSM1Q5VVJ2 828 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 CCDC73Q6ZRK6 1079 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 UBE2Q1Q7Z7E8 422 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 CATIPQ7Z7H3 387 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 CCDC34Q96HJ3 373 aa5.87□□□□□ -1.47
EPHA3-202ENST00000452448 HSPA5P11021 654 aaKnown RBP5.86□□□□□ -1.47
EPHA3-202ENST00000452448 IBSPP21815 317 aaPredicted RBP5.86□□□□□ -1.47
EPHA3-202ENST00000452448 ADCY2Q08462 1091 aa5.86□□□□□ -1.47
EPHA3-202ENST00000452448 ARSIQ5FYB1 569 aa5.86□□□□□ -1.47
EPHA3-202ENST00000452448 PMFBP1Q8TBY8 1022 aa5.86□□□□□ -1.47
EPHA3-202ENST00000452448 TRIM11Q96F44 468 aa5.86□□□□□ -1.47
EPHA3-202ENST00000452448 UPF2Q9HAU5 1272 aaKnown RBP5.86□□□□□ -1.47
EPHA3-202ENST00000452448 TRMT1Q9NXH9 659 aaKnown RBP5.86□□□□□ -1.47
EPHA3-202ENST00000452448 POGKQ9P215 609 aa5.86□□□□□ -1.47
EPHA3-202ENST00000452448 FAM198AQ9UFP1 575 aa5.86□□□□□ -1.47
EPHA3-202ENST00000452448 RAB3GAP2Q9H2M9 1393 aa5.86□□□□□ -1.47
EPHA3-202ENST00000452448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.86□□□□□ -1.47
EPHA3-202ENST00000452448 GRIN2AQ12879 1464 aa5.86□□□□□ -1.47
EPHA3-202ENST00000452448 TDRD9Q8NDG6 1382 aaKnown RBP5.86□□□□□ -1.47
EPHA3-202ENST00000452448 PALM3A6NDB9 673 aaPredicted RBP5.86□□□□□ -1.47
EPHA3-202ENST00000452448 FOSL1P15407 271 aa5.86□□□□□ -1.47
EPHA3-202ENST00000452448 ALDH1B1P30837 517 aa5.86□□□□□ -1.47
EPHA3-202ENST00000452448 ZNF132P52740 706 aa5.86□□□□□ -1.47
EPHA3-202ENST00000452448 PRPF4BQ13523 1007 aaKnown RBP5.86□□□□□ -1.47
EPHA3-202ENST00000452448 CCDC178Q5BJE1 867 aa5.86□□□□□ -1.47
EPHA3-202ENST00000452448 WAPLQ7Z5K2 1190 aa5.86□□□□□ -1.47
EPHA3-202ENST00000452448 NCAPG2Q86XI2 1143 aa5.86□□□□□ -1.47
EPHA3-202ENST00000452448 CWC15Q9P013 229 aaKnown RBP5.86□□□□□ -1.47
EPHA3-202ENST00000452448 IP6K2Q9UHH9 426 aa5.86□□□□□ -1.47
EPHA3-202ENST00000452448 SFMBT1Q9UHJ3 866 aa5.86□□□□□ -1.47
EPHA3-202ENST00000452448 DMGDHQ9UI17 866 aaKnown RBP5.86□□□□□ -1.47
EPHA3-202ENST00000452448 JRKLQ9Y4A0 524 aa5.86□□□□□ -1.47
EPHA3-202ENST00000452448 LDHCP07864 332 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 VCAM1P19320 739 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 IL4RP24394 825 aa5.85□□□□□ -1.47
EPHA3-202ENST00000452448 SART3Q15020 963 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms