RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 GAS2L3Q86XJ1 694 aa14.59□□□□□ -0.07
COL27A1-202ENST00000451716 BOLA2Q9H3K6 86 aa14.59□□□□□ -0.07
COL27A1-202ENST00000451716 SNX14Q9Y5W7 946 aa14.59□□□□□ -0.07
COL27A1-202ENST00000451716 LMTK3Q96Q04 1460 aa14.59□□□□□ -0.07
COL27A1-202ENST00000451716 WDR17Q8IZU2 1322 aa14.59□□□□□ -0.07
COL27A1-202ENST00000451716 PTH1RQ03431 593 aa14.59□□□□□ -0.07
COL27A1-202ENST00000451716 DTNBO60941 627 aa14.58□□□□□ -0.08
COL27A1-202ENST00000451716 CLEC17AQ6ZS10 378 aa14.58□□□□□ -0.08
COL27A1-202ENST00000451716 GPATCH3Q96I76 525 aa14.58□□□□□ -0.08
COL27A1-202ENST00000451716 A0A087WZG4 1122 aa14.58□□□□□ -0.08
COL27A1-202ENST00000451716 NBPF26B4DH59 902 aa14.58□□□□□ -0.08
COL27A1-202ENST00000451716 NCLP19338 710 aaKnown RBP14.58□□□□□ -0.08
COL27A1-202ENST00000451716 NBPF14Q5TI25 921 aa14.58□□□□□ -0.08
COL27A1-202ENST00000451716 NBPF10Q6P3W6 841 aaKnown RBP14.58□□□□□ -0.08
COL27A1-202ENST00000451716 NBPF15Q8N660 670 aa14.58□□□□□ -0.08
COL27A1-202ENST00000451716 A1BGP04217 495 aa14.57□□□□□ -0.08
COL27A1-202ENST00000451716 FOXD4L6Q3SYB3 417 aaPredicted RBP14.57□□□□□ -0.08
COL27A1-202ENST00000451716 FOXD4L3Q6VB84 417 aaPredicted RBP14.57□□□□□ -0.08
COL27A1-202ENST00000451716 FAM227BQ96M60 508 aa14.57□□□□□ -0.08
COL27A1-202ENST00000451716 XIRP1Q702N8 1843 aaKnown RBP14.57□□□□□ -0.08
COL27A1-202ENST00000451716 MCM2P49736 904 aa14.57□□□□□ -0.08
COL27A1-202ENST00000451716 SKOR2Q2VWA4 1001 aaPredicted RBP14.57□□□□□ -0.08
COL27A1-202ENST00000451716 TTLL7Q6ZT98 887 aa14.57□□□□□ -0.08
COL27A1-202ENST00000451716 TEX2Q8IWB9 1127 aa14.57□□□□□ -0.08
COL27A1-202ENST00000451716 EDC3Q96F86 508 aaKnown RBP14.57□□□□□ -0.08
COL27A1-202ENST00000451716 PRPF40AO75400 957 aaKnown RBP14.56□□□□□ -0.08
COL27A1-202ENST00000451716 ZNF830Q96NB3 372 aaPredicted RBP14.56□□□□□ -0.08
COL27A1-202ENST00000451716 CCDC9Q9Y3X0 531 aaKnown RBP14.56□□□□□ -0.08
COL27A1-202ENST00000451716 NDUFB9Q9Y6M9 179 aa14.56□□□□□ -0.08
COL27A1-202ENST00000451716 CUL4AQ13619 759 aa14.56□□□□□ -0.08
COL27A1-202ENST00000451716 PRPF40BQ6NWY9 871 aaKnown RBP14.56□□□□□ -0.08
COL27A1-202ENST00000451716 GRPEL1Q9HAV7 217 aa14.56□□□□□ -0.08
COL27A1-202ENST00000451716 LMBRD1Q9NUN5 540 aa14.56□□□□□ -0.08
COL27A1-202ENST00000451716 SOS2Q07890 1332 aaPredicted RBP14.55□□□□□ -0.08
COL27A1-202ENST00000451716 PCDH11XQ9BZA7 1347 aa14.55□□□□□ -0.08
COL27A1-202ENST00000451716 PCDH11YQ9BZA8 1340 aa14.55□□□□□ -0.08
COL27A1-202ENST00000451716 MRC1P22897 1456 aa14.55□□□□□ -0.08
COL27A1-202ENST00000451716 EVI5LQ96CN4 794 aa14.55□□□□□ -0.08
COL27A1-202ENST00000451716 ZHX1Q9UKY1 873 aaPredicted RBP14.55□□□□□ -0.08
COL27A1-202ENST00000451716 CHMP3Q9Y3E7 222 aa14.55□□□□□ -0.08
COL27A1-202ENST00000451716 EVA1CP58658 441 aa14.55□□□□□ -0.08
COL27A1-202ENST00000451716 PTPN12Q05209 780 aaKnown RBP14.55□□□□□ -0.08
COL27A1-202ENST00000451716 ZBTB3Q9H5J0 574 aa14.55□□□□□ -0.08
COL27A1-202ENST00000451716 CASTP20810 708 aaKnown RBP14.54□□□□□ -0.08
COL27A1-202ENST00000451716 TFCP2Q12800 502 aa14.54□□□□□ -0.08
COL27A1-202ENST00000451716 NMIQ13287 307 aaPredicted RBP14.54□□□□□ -0.08
COL27A1-202ENST00000451716 ADCK5Q3MIX3 580 aa14.54□□□□□ -0.08
COL27A1-202ENST00000451716 PLBD2Q8NHP8 589 aa14.54□□□□□ -0.08
COL27A1-202ENST00000451716 ZNF330Q9Y3S2 320 aaPredicted RBP14.54□□□□□ -0.08
COL27A1-202ENST00000451716 PKD1L3Q7Z443 1732 aa14.54□□□□□ -0.08
COL27A1-202ENST00000451716 VGLL3A8MV65 326 aa14.54□□□□□ -0.08
COL27A1-202ENST00000451716 IL2RBP14784 551 aa14.54□□□□□ -0.08
COL27A1-202ENST00000451716 AK2P54819 239 aa14.54□□□□□ -0.08
COL27A1-202ENST00000451716 KLHL40Q2TBA0 621 aa14.54□□□□□ -0.08
COL27A1-202ENST00000451716 RUFY2Q8WXA3 655 aa14.54□□□□□ -0.08
COL27A1-202ENST00000451716 IL17RAQ96F46 866 aa14.54□□□□□ -0.08
COL27A1-202ENST00000451716 PTMSP20962 102 aa14.53□□□□□ -0.08
COL27A1-202ENST00000451716 RFX5P48382 616 aaPredicted RBP14.53□□□□□ -0.08
COL27A1-202ENST00000451716 MRE11P49959 708 aa14.53□□□□□ -0.08
COL27A1-202ENST00000451716 CAVIN1Q6NZI2 390 aaKnown RBP14.53□□□□□ -0.08
COL27A1-202ENST00000451716 LMBR1LQ6UX01 489 aa14.53□□□□□ -0.08
COL27A1-202ENST00000451716 FSD1Q9BTV5 496 aa14.53□□□□□ -0.08
COL27A1-202ENST00000451716 COL5A2P05997 1499 aaPredicted RBP14.53□□□□□ -0.08
COL27A1-202ENST00000451716 A0A0D9SFI3 127 aa14.53□□□□□ -0.08
COL27A1-202ENST00000451716 CHGBP05060 677 aa14.53□□□□□ -0.08
COL27A1-202ENST00000451716 COL9A3Q14050 684 aaPredicted RBP14.53□□□□□ -0.08
COL27A1-202ENST00000451716 KDM4FA0A1W2PPD8 638 aa14.52□□□□□ -0.08
COL27A1-202ENST00000451716 TTC14Q96N46 770 aa14.52□□□□□ -0.08
COL27A1-202ENST00000451716 DBNLQ9UJU6 430 aaKnown RBP14.52□□□□□ -0.08
COL27A1-202ENST00000451716 RUFY3Q7L099 469 aa14.52□□□□□ -0.09
COL27A1-202ENST00000451716 JAKMIP1Q96N16 626 aaKnown RBP14.52□□□□□ -0.09
COL27A1-202ENST00000451716 COPRSQ9NQ92 184 aa14.52□□□□□ -0.09
COL27A1-202ENST00000451716 EPB41L2O43491 1005 aaKnown RBP14.52□□□□□ -0.09
COL27A1-202ENST00000451716 BRD1O95696 1058 aa14.52□□□□□ -0.09
COL27A1-202ENST00000451716 KCNJ4P48050 445 aa14.52□□□□□ -0.09
COL27A1-202ENST00000451716 RBM27Q9P2N5 1060 aaKnown RBP14.52□□□□□ -0.09
COL27A1-202ENST00000451716 LARGE1O95461 756 aa14.51□□□□□ -0.09
COL27A1-202ENST00000451716 CASP7P55210 303 aa14.51□□□□□ -0.09
COL27A1-202ENST00000451716 GPT2Q8TD30 523 aa14.51□□□□□ -0.09
COL27A1-202ENST00000451716 INTS4Q96HW7 963 aaKnown RBP14.51□□□□□ -0.09
COL27A1-202ENST00000451716 CARD10Q9BWT7 1032 aa14.51□□□□□ -0.09
COL27A1-202ENST00000451716 NSFL1CQ9UNZ2 370 aaKnown RBP14.51□□□□□ -0.09
COL27A1-202ENST00000451716 ERVV-2B6SEH9 535 aa14.51□□□□□ -0.09
COL27A1-202ENST00000451716 TNNI3KQ59H18 835 aa14.51□□□□□ -0.09
COL27A1-202ENST00000451716 RBM8AQ9Y5S9 174 aaKnown RBP14.51□□□□□ -0.09
COL27A1-202ENST00000451716 FPGT-TNNI3KV9GXZ4 949 aa14.51□□□□□ -0.09
COL27A1-202ENST00000451716 CCDC171Q6TFL3 1326 aa14.51□□□□□ -0.09
COL27A1-202ENST00000451716 ABCC6O95255 1503 aa14.5□□□□□ -0.09
COL27A1-202ENST00000451716 RABL6Q3YEC7 729 aaPredicted RBP14.5□□□□□ -0.09
COL27A1-202ENST00000451716 DBNDD2Q9BQY9 259 aa14.5□□□□□ -0.09
COL27A1-202ENST00000451716 GLI3P10071 1580 aa14.5□□□□□ -0.09
COL27A1-202ENST00000451716 CHRM1P11229 460 aaPredicted RBP14.5□□□□□ -0.09
COL27A1-202ENST00000451716 ZNF589Q86UQ0 364 aaPredicted RBP14.5□□□□□ -0.09
COL27A1-202ENST00000451716 DNAJC2Q99543 621 aaKnown RBP14.5□□□□□ -0.09
COL27A1-202ENST00000451716 GDPD2Q9HCC8 539 aa14.5□□□□□ -0.09
COL27A1-202ENST00000451716 TAF6LQ9Y6J9 622 aa14.5□□□□□ -0.09
COL27A1-202ENST00000451716 AFDNP55196 1824 aaKnown RBP14.5□□□□□ -0.09
COL27A1-202ENST00000451716 STRCQ7RTU9 1775 aa14.49□□□□□ -0.09
COL27A1-202ENST00000451716 TMEM51Q9NW97 253 aa14.49□□□□□ -0.09
COL27A1-202ENST00000451716 FOXO4P98177 505 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms