RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 GIGYF2Q6Y7W6 1299 aaKnown RBP11.74□□□□□ -0.53
RFX3-207ENST00000449190 NBPF5PQ86XG9 351 aaPredicted RBP11.74□□□□□ -0.53
RFX3-207ENST00000449190 C2CD5Q86YS7 1000 aa11.74□□□□□ -0.53
RFX3-207ENST00000449190 CNBD1Q8NA66 436 aa11.74□□□□□ -0.53
RFX3-207ENST00000449190 ZNF579Q8NAF0 562 aaKnown RBP11.74□□□□□ -0.53
RFX3-207ENST00000449190 CHPF2Q9P2E5 772 aa11.74□□□□□ -0.53
RFX3-207ENST00000449190 ARHGAP27Q6ZUM4 889 aa11.73□□□□□ -0.53
RFX3-207ENST00000449190 COPS6Q7L5N1 327 aa11.73□□□□□ -0.53
RFX3-207ENST00000449190 TTLL6Q8N841 843 aa11.73□□□□□ -0.53
RFX3-207ENST00000449190 ZNF784Q8NCA9 323 aaPredicted RBP11.73□□□□□ -0.53
RFX3-207ENST00000449190 KIF13BQ9NQT8 1826 aa11.73□□□□□ -0.53
RFX3-207ENST00000449190 TCERG1O14776 1098 aaKnown RBP11.72□□□□□ -0.53
RFX3-207ENST00000449190 DDX58O95786 925 aaKnown RBP11.72□□□□□ -0.53
RFX3-207ENST00000449190 AIMP1Q12904 312 aaKnown RBP11.72□□□□□ -0.53
RFX3-207ENST00000449190 PROSER3Q2NL68 480 aa11.72□□□□□ -0.53
RFX3-207ENST00000449190 ALDH1L2Q3SY69 923 aa11.72□□□□□ -0.53
RFX3-207ENST00000449190 ZNF34Q8IZ26 560 aa11.72□□□□□ -0.53
RFX3-207ENST00000449190 NYXQ9GZU5 481 aa11.72□□□□□ -0.53
RFX3-207ENST00000449190 ZBTB3Q9H5J0 574 aa11.72□□□□□ -0.53
RFX3-207ENST00000449190 KLRG2A4D1S0 409 aaPredicted RBP11.71□□□□□ -0.53
RFX3-207ENST00000449190 ANXA1P04083 346 aa11.71□□□□□ -0.53
RFX3-207ENST00000449190 GTF2E1P29083 439 aaPredicted RBP11.71□□□□□ -0.53
RFX3-207ENST00000449190 PARP10Q53GL7 1025 aa11.71□□□□□ -0.53
RFX3-207ENST00000449190 STYK1Q6J9G0 422 aa11.71□□□□□ -0.53
RFX3-207ENST00000449190 CCDC24Q8N4L8 307 aa11.71□□□□□ -0.53
RFX3-207ENST00000449190 XAGE3Q8WTP9 111 aa11.71□□□□□ -0.53
RFX3-207ENST00000449190 CNKSR1Q969H4 720 aa11.71□□□□□ -0.53
RFX3-207ENST00000449190 ZNF622Q969S3 477 aaKnown RBP eCLIP11.71□□□□□ -0.53
RFX3-207ENST00000449190 OTUD5Q96G74 571 aa11.71□□□□□ -0.53
RFX3-207ENST00000449190 SMC4Q9NTJ3 1288 aa11.71□□□□□ -0.53
RFX3-207ENST00000449190 NRXN2Q9P2S2 1712 aa11.7□□□□□ -0.54
RFX3-207ENST00000449190 SRGNP10124 158 aa11.7□□□□□ -0.54
RFX3-207ENST00000449190 HSP90AB3PQ58FF7 597 aa11.7□□□□□ -0.54
RFX3-207ENST00000449190 PPP1R42Q7Z4L9 355 aa11.7□□□□□ -0.54
RFX3-207ENST00000449190 MASTLQ96GX5 879 aa11.7□□□□□ -0.54
RFX3-207ENST00000449190 FAM177BA6PVY3 158 aa11.69□□□□□ -0.54
RFX3-207ENST00000449190 RARSP54136 660 aaKnown RBP11.69□□□□□ -0.54
RFX3-207ENST00000449190 TCIRG1Q13488 830 aa11.69□□□□□ -0.54
RFX3-207ENST00000449190 SUSD4Q5VX71 490 aa11.69□□□□□ -0.54
RFX3-207ENST00000449190 ANKRD13DQ6ZTN6 518 aa11.69□□□□□ -0.54
RFX3-207ENST00000449190 RIC3Q7Z5B4 369 aa11.69□□□□□ -0.54
RFX3-207ENST00000449190 PLBD2Q8NHP8 589 aa11.69□□□□□ -0.54
RFX3-207ENST00000449190 SSH1Q8WYL5 1049 aa11.69□□□□□ -0.54
RFX3-207ENST00000449190 ATP10DQ9P241 1426 aa11.69□□□□□ -0.54
RFX3-207ENST00000449190 CHD4Q14839 1912 aa11.68□□□□□ -0.54
RFX3-207ENST00000449190 IPO8O15397 1037 aaKnown RBP11.68□□□□□ -0.54
RFX3-207ENST00000449190 NPR1P16066 1061 aa11.68□□□□□ -0.54
RFX3-207ENST00000449190 GPTP24298 496 aa11.68□□□□□ -0.54
RFX3-207ENST00000449190 FKBP5Q13451 457 aaPredicted RBP11.68□□□□□ -0.54
RFX3-207ENST00000449190 SLC10A5Q5PT55 438 aa11.68□□□□□ -0.54
RFX3-207ENST00000449190 MRPL50Q8N5N7 158 aaKnown RBP11.68□□□□□ -0.54
RFX3-207ENST00000449190 PHAXQ9H814 394 aaKnown RBP11.68□□□□□ -0.54
RFX3-207ENST00000449190 N4BP2Q86UW6 1770 aaPredicted RBP11.68□□□□□ -0.54
RFX3-207ENST00000449190 AFDNP55196 1824 aaKnown RBP11.67□□□□□ -0.54
RFX3-207ENST00000449190 KIAA1551Q9HCM1 1747 aa11.67□□□□□ -0.54
RFX3-207ENST00000449190 ALDH1B1P30837 517 aa11.67□□□□□ -0.54
RFX3-207ENST00000449190 FLIIQ13045 1269 aa11.67□□□□□ -0.54
RFX3-207ENST00000449190 ERFEQ4G0M1 354 aa11.67□□□□□ -0.54
RFX3-207ENST00000449190 UTP14AQ9BVJ6 771 aaKnown RBP11.67□□□□□ -0.54
RFX3-207ENST00000449190 BCL2L13Q9BXK5 485 aa11.67□□□□□ -0.54
RFX3-207ENST00000449190 RCAN3Q9UKA8 241 aa11.67□□□□□ -0.54
RFX3-207ENST00000449190 SCN7AQ01118 1682 aa11.67□□□□□ -0.54
RFX3-207ENST00000449190 LAMB4A4D0S4 1761 aa11.67□□□□□ -0.54
RFX3-207ENST00000449190 IBTKQ9P2D0 1353 aaPredicted RBP11.67□□□□□ -0.54
RFX3-207ENST00000449190 UBN2Q6ZU65 1347 aa11.66□□□□□ -0.54
RFX3-207ENST00000449190 NTSR2O95665 410 aa11.66□□□□□ -0.54
RFX3-207ENST00000449190 NEXNQ0ZGT2 675 aa11.66□□□□□ -0.54
RFX3-207ENST00000449190 C9orf131Q5VYM1 1079 aa11.66□□□□□ -0.54
RFX3-207ENST00000449190 G2E3Q7L622 706 aa11.66□□□□□ -0.54
RFX3-207ENST00000449190 NUTM1Q86Y26 1132 aa11.66□□□□□ -0.54
RFX3-207ENST00000449190 PTPRCP08575 1304 aa11.65□□□□□ -0.54
RFX3-207ENST00000449190 RNF123Q5XPI4 1314 aa11.65□□□□□ -0.54
RFX3-207ENST00000449190 KIF16BQ96L93 1317 aa11.65□□□□□ -0.54
RFX3-207ENST00000449190 POTEB2H3BUK9 544 aa11.65□□□□□ -0.54
RFX3-207ENST00000449190 C21orf2O43822 256 aa11.65□□□□□ -0.54
RFX3-207ENST00000449190 TRIM28Q13263 835 aaKnown RBP11.65□□□□□ -0.54
RFX3-207ENST00000449190 CRY2Q49AN0 593 aa11.65□□□□□ -0.54
RFX3-207ENST00000449190 SOGA3Q5TF21 947 aa11.65□□□□□ -0.54
RFX3-207ENST00000449190 KSR2Q6VAB6 950 aa11.65□□□□□ -0.54
RFX3-207ENST00000449190 NLRP10Q86W26 655 aa11.65□□□□□ -0.54
RFX3-207ENST00000449190 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.65□□□□□ -0.54
RFX3-207ENST00000449190 FRAT1Q92837 279 aaPredicted RBP11.65□□□□□ -0.54
RFX3-207ENST00000449190 NLRP3Q96P20 1036 aa11.65□□□□□ -0.54
RFX3-207ENST00000449190 API5Q9BZZ5 524 aaKnown RBP11.65□□□□□ -0.54
RFX3-207ENST00000449190 NOB1Q9ULX3 412 aaKnown RBP11.65□□□□□ -0.54
RFX3-207ENST00000449190 BCORQ6W2J9 1755 aa11.64□□□□□ -0.55
RFX3-207ENST00000449190 PI4KAP2A4QPH2 592 aa11.64□□□□□ -0.55
RFX3-207ENST00000449190 GALR2O43603 387 aaPredicted RBP11.64□□□□□ -0.55
RFX3-207ENST00000449190 BCAR3O75815 825 aa11.64□□□□□ -0.55
RFX3-207ENST00000449190 HOXA10P31260 410 aaPredicted RBP11.64□□□□□ -0.55
RFX3-207ENST00000449190 BRPF1P55201 1214 aaPredicted RBP11.64□□□□□ -0.55
RFX3-207ENST00000449190 PRPF40BQ6NWY9 871 aaKnown RBP11.64□□□□□ -0.55
RFX3-207ENST00000449190 PI4KAP1Q8N8J0 262 aa11.64□□□□□ -0.55
RFX3-207ENST00000449190 C7orf43Q8WVR3 580 aa11.64□□□□□ -0.55
RFX3-207ENST00000449190 ISCA1Q9BUE6 129 aa11.64□□□□□ -0.55
RFX3-207ENST00000449190 MAP3K2Q9Y2U5 619 aa11.64□□□□□ -0.55
RFX3-207ENST00000449190 ADCY9O60503 1353 aa11.64□□□□□ -0.55
RFX3-207ENST00000449190 POTEMA6NI47 508 aa11.63□□□□□ -0.55
RFX3-207ENST00000449190 MS4A1P11836 297 aa11.63□□□□□ -0.55
RFX3-207ENST00000449190 LMNB1P20700 586 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms