RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 DNAJC2Q99543 621 aaKnown RBP17.9■□□□□ 0.46
SF1-211ENST00000448404 DBNLQ9UJU6 430 aaKnown RBP17.9■□□□□ 0.46
SF1-211ENST00000448404 AOX1Q06278 1338 aa17.9■□□□□ 0.46
SF1-211ENST00000448404 PTPN12Q05209 780 aaKnown RBP17.9■□□□□ 0.46
SF1-211ENST00000448404 L1TD1Q5T7N2 865 aaKnown RBP17.9■□□□□ 0.46
SF1-211ENST00000448404 FSD1Q9BTV5 496 aa17.9■□□□□ 0.46
SF1-211ENST00000448404 A0A0G2JS52 829 aa17.89■□□□□ 0.45
SF1-211ENST00000448404 EVA1CP58658 441 aa17.89■□□□□ 0.45
SF1-211ENST00000448404 NECAB1Q8N987 351 aa17.89■□□□□ 0.45
SF1-211ENST00000448404 DBNDD2Q9BQY9 259 aa17.89■□□□□ 0.45
SF1-211ENST00000448404 COL18A1P39060 1754 aa17.89■□□□□ 0.45
SF1-211ENST00000448404 SIPA1L3O60292 1781 aaPredicted RBP17.89■□□□□ 0.45
SF1-211ENST00000448404 GOLGA6L22H0YM25 854 aa17.89■□□□□ 0.45
SF1-211ENST00000448404 SYNE4Q8N205 404 aa17.89■□□□□ 0.45
SF1-211ENST00000448404 KIF1AQ12756 1690 aa17.89■□□□□ 0.45
SF1-211ENST00000448404 KCNJ4P48050 445 aa17.88■□□□□ 0.45
SF1-211ENST00000448404 N4BP2Q86UW6 1770 aaPredicted RBP17.88■□□□□ 0.45
SF1-211ENST00000448404 UTYO14607 1347 aa17.88■□□□□ 0.45
SF1-211ENST00000448404 TTC41PQ6P2S7 1318 aa17.88■□□□□ 0.45
SF1-211ENST00000448404 WDR17Q8IZU2 1322 aa17.88■□□□□ 0.45
SF1-211ENST00000448404 KDM4FA0A1W2PPD8 638 aa17.87■□□□□ 0.45
SF1-211ENST00000448404 RFX5P48382 616 aaPredicted RBP17.87■□□□□ 0.45
SF1-211ENST00000448404 DDX46Q7L014 1031 aaKnown RBP17.87■□□□□ 0.45
SF1-211ENST00000448404 CHMP4AQ9BY43 222 aa17.87■□□□□ 0.45
SF1-211ENST00000448404 TIMM10P62072 90 aa17.87■□□□□ 0.45
SF1-211ENST00000448404 ASAP1Q9ULH1 1129 aa17.87■□□□□ 0.45
SF1-211ENST00000448404 OVOS2A0A0G2JMS6 1433 aa17.87■□□□□ 0.45
SF1-211ENST00000448404 CCDC83Q8IWF9 413 aa17.86■□□□□ 0.45
SF1-211ENST00000448404 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.86■□□□□ 0.451e-10■■■□□ 15.6
SF1-211ENST00000448404 RBM8AQ9Y5S9 174 aaKnown RBP17.86■□□□□ 0.45
SF1-211ENST00000448404 GADD45BO75293 160 aaPredicted RBP17.86■□□□□ 0.45
SF1-211ENST00000448404 CUL4AQ13619 759 aa17.86■□□□□ 0.45
SF1-211ENST00000448404 NEUROD6Q96NK8 337 aa17.86■□□□□ 0.45
SF1-211ENST00000448404 CWC22Q9HCG8 908 aaKnown RBP17.86■□□□□ 0.45
SF1-211ENST00000448404 SCN11AQ9UI33 1791 aa17.86■□□□□ 0.45
SF1-211ENST00000448404 ANAPC15P60006 121 aa17.85■□□□□ 0.45
SF1-211ENST00000448404 PPFIA3O75145 1194 aa17.85■□□□□ 0.45
SF1-211ENST00000448404 LRRC24Q50LG9 513 aa17.85■□□□□ 0.45
SF1-211ENST00000448404 ERC1Q8IUD2 1116 aa17.85■□□□□ 0.45
SF1-211ENST00000448404 TTC14Q96N46 770 aa17.85■□□□□ 0.45
SF1-211ENST00000448404 PUS3Q9BZE2 481 aaKnown RBP17.85■□□□□ 0.45
SF1-211ENST00000448404 USP42Q9H9J4 1324 aaKnown RBP17.85■□□□□ 0.45
SF1-211ENST00000448404 KLHL40Q2TBA0 621 aa17.85■□□□□ 0.45
SF1-211ENST00000448404 EVI5LQ96CN4 794 aa17.85■□□□□ 0.45
SF1-211ENST00000448404 GPATCH3Q96I76 525 aa17.85■□□□□ 0.45
SF1-211ENST00000448404 TMEM63CQ9P1W3 806 aa17.85■□□□□ 0.45
SF1-211ENST00000448404 IL2RBP14784 551 aa17.84■□□□□ 0.45
SF1-211ENST00000448404 SYTL4Q96C24 671 aaPredicted RBP17.84■□□□□ 0.45
SF1-211ENST00000448404 A0A0G2JLW4 131 aa17.84■□□□□ 0.45
SF1-211ENST00000448404 BRD1O95696 1058 aa17.84■□□□□ 0.45
SF1-211ENST00000448404 MRE11P49959 708 aa17.84■□□□□ 0.45
SF1-211ENST00000448404 ZSCAN23Q3MJ62 389 aa17.84■□□□□ 0.45
SF1-211ENST00000448404 TNNI3KQ59H18 835 aa17.84■□□□□ 0.45
SF1-211ENST00000448404 FPGT-TNNI3KV9GXZ4 949 aa17.84■□□□□ 0.45
SF1-211ENST00000448404 BTG4Q9NY30 223 aa17.83■□□□□ 0.45
SF1-211ENST00000448404 CCDC171Q6TFL3 1326 aa17.83■□□□□ 0.44
SF1-211ENST00000448404 CASP7P55210 303 aa17.83■□□□□ 0.44
SF1-211ENST00000448404 ST3GAL1Q11201 340 aa17.83■□□□□ 0.44
SF1-211ENST00000448404 STK3Q13188 491 aa17.83■□□□□ 0.44
SF1-211ENST00000448404 CLEC17AQ6ZS10 378 aa17.83■□□□□ 0.44
SF1-211ENST00000448404 PLBD2Q8NHP8 589 aa17.83■□□□□ 0.44
SF1-211ENST00000448404 COL15A1P39059 1388 aa17.83■□□□□ 0.44
SF1-211ENST00000448404 SYCE3A1L190 88 aa17.82■□□□□ 0.44
SF1-211ENST00000448404 PRIM1P49642 420 aaKnown RBP17.82■□□□□ 0.44
SF1-211ENST00000448404 CREB3L3Q68CJ9 461 aa17.82■□□□□ 0.44
SF1-211ENST00000448404 DNAJC10Q8IXB1 793 aa17.82■□□□□ 0.44
SF1-211ENST00000448404 LRRC2Q9BYS8 371 aa17.82■□□□□ 0.44
SF1-211ENST00000448404 FOXO4P98177 505 aa17.82■□□□□ 0.44
SF1-211ENST00000448404 PCDH11XQ9BZA7 1347 aa17.82■□□□□ 0.44
SF1-211ENST00000448404 PCDH11YQ9BZA8 1340 aa17.82■□□□□ 0.44
SF1-211ENST00000448404 GPTP24298 496 aa17.81■□□□□ 0.44
SF1-211ENST00000448404 SKOR2Q2VWA4 1001 aaPredicted RBP17.81■□□□□ 0.44
SF1-211ENST00000448404 RNF214Q8ND24 703 aa17.81■□□□□ 0.44
SF1-211ENST00000448404 FAM89AQ96GI7 184 aa17.81■□□□□ 0.44
SF1-211ENST00000448404 PDRG1Q9NUG6 133 aa17.81■□□□□ 0.44
SF1-211ENST00000448404 COL5A2P05997 1499 aaPredicted RBP17.81■□□□□ 0.44
SF1-211ENST00000448404 SOS2Q07890 1332 aaPredicted RBP17.81■□□□□ 0.44
SF1-211ENST00000448404 NECTIN1Q15223 517 aa17.81■□□□□ 0.44
SF1-211ENST00000448404 FAM173BQ6P4H8 233 aa17.81■□□□□ 0.44
SF1-211ENST00000448404 ADAMTS7Q9UKP4 1686 aa17.81■□□□□ 0.44
SF1-211ENST00000448404 CPDO75976 1380 aa17.8■□□□□ 0.44
SF1-211ENST00000448404 RPAP1Q9BWH6 1393 aaPredicted RBP17.8■□□□□ 0.44
SF1-211ENST00000448404 ME3Q16798 604 aa17.8■□□□□ 0.44
SF1-211ENST00000448404 SNRKQ9NRH2 765 aa17.8■□□□□ 0.44
SF1-211ENST00000448404 CNPY2Q9Y2B0 182 aa17.8■□□□□ 0.44
SF1-211ENST00000448404 CRYBG1Q9Y4K1 1723 aa17.8■□□□□ 0.44
SF1-211ENST00000448404 DCCP43146 1447 aa17.8■□□□□ 0.44
SF1-211ENST00000448404 ERBB4Q15303 1308 aa17.8■□□□□ 0.44
SF1-211ENST00000448404 HSP90AB3PQ58FF7 597 aa17.8■□□□□ 0.44
SF1-211ENST00000448404 VSIG10Q8N0Z9 540 aa17.8■□□□□ 0.44
SF1-211ENST00000448404 COPRSQ9NQ92 184 aa17.8■□□□□ 0.44
SF1-211ENST00000448404 XIRP1Q702N8 1843 aaKnown RBP17.8■□□□□ 0.44
SF1-211ENST00000448404 SLC27A2O14975 620 aa17.79■□□□□ 0.44
SF1-211ENST00000448404 PIGBQ92521 554 aa17.79■□□□□ 0.44
SF1-211ENST00000448404 RBSNQ9H1K0 784 aa17.79■□□□□ 0.44
SF1-211ENST00000448404 TPCN1Q9ULQ1 816 aa17.79■□□□□ 0.44
SF1-211ENST00000448404 FERMT3Q86UX7 667 aa17.79■□□□□ 0.44
SF1-211ENST00000448404 RUFY2Q8WXA3 655 aa17.79■□□□□ 0.44
SF1-211ENST00000448404 GOLIM4O00461 696 aa17.79■□□□□ 0.44
SF1-211ENST00000448404 SYT1P21579 422 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms