RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 TTC16Q8NEE8 873 aa7.37□□□□□ -1.23
HMGB1P16-201ENST00000447155 ZNF428Q96B54 188 aa7.37□□□□□ -1.23
HMGB1P16-201ENST00000447155 TRIM47Q96LD4 638 aa7.37□□□□□ -1.23
HMGB1P16-201ENST00000447155 CEP63Q96MT8 703 aa7.37□□□□□ -1.23
HMGB1P16-201ENST00000447155 GPR182O15218 404 aa7.36□□□□□ -1.23
HMGB1P16-201ENST00000447155 PLCB3Q01970 1234 aa7.36□□□□□ -1.23
HMGB1P16-201ENST00000447155 FMR1Q06787 632 aaKnown RBP eCLIP7.36□□□□□ -1.23
HMGB1P16-201ENST00000447155 ZNF326Q5BKZ1 582 aaKnown RBP7.36□□□□□ -1.23
HMGB1P16-201ENST00000447155 FIGNL1Q6PIW4 674 aa7.36□□□□□ -1.23
HMGB1P16-201ENST00000447155 RIPOR1Q6ZS17 1223 aa7.36□□□□□ -1.23
HMGB1P16-201ENST00000447155 FBXO33Q7Z6M2 555 aa7.36□□□□□ -1.23
HMGB1P16-201ENST00000447155 GIPC2Q8TF65 315 aa7.36□□□□□ -1.23
HMGB1P16-201ENST00000447155 FNDC3AQ9Y2H6 1198 aaKnown RBP7.36□□□□□ -1.23
HMGB1P16-201ENST00000447155 RTCBQ9Y3I0 505 aaKnown RBP7.36□□□□□ -1.23
HMGB1P16-201ENST00000447155 H7C1W4 665 aa7.35□□□□□ -1.23
HMGB1P16-201ENST00000447155 P4HBP07237 508 aaKnown RBP7.35□□□□□ -1.23
HMGB1P16-201ENST00000447155 ZNF16P17020 682 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P16-201ENST00000447155 C8orf34Q49A92 452 aa7.35□□□□□ -1.23
HMGB1P16-201ENST00000447155 GGNBP2Q9H3C7 697 aa7.35□□□□□ -1.23
HMGB1P16-201ENST00000447155 GMPR2Q9P2T1 348 aaKnown RBP7.35□□□□□ -1.23
HMGB1P16-201ENST00000447155 TRIM22Q8IYM9 498 aa7.34□□□□□ -1.23
HMGB1P16-201ENST00000447155 CMTR1Q8N1G2 835 aaKnown RBP7.34□□□□□ -1.23
HMGB1P16-201ENST00000447155 CCDC155Q8N6L0 562 aa7.34□□□□□ -1.23
HMGB1P16-201ENST00000447155 GMCL1Q96IK5 515 aa7.34□□□□□ -1.23
HMGB1P16-201ENST00000447155 ZCCHC2Q9C0B9 1178 aaKnown RBP7.34□□□□□ -1.23
HMGB1P16-201ENST00000447155 NUCKS1Q9H1E3 243 aaKnown RBP7.34□□□□□ -1.23
HMGB1P16-201ENST00000447155 C11orf16Q9NQ32 467 aa7.34□□□□□ -1.23
HMGB1P16-201ENST00000447155 E9PSI1 815 aa7.33□□□□□ -1.24
HMGB1P16-201ENST00000447155 ATXN7O15265 892 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P16-201ENST00000447155 NEFLP07196 543 aa7.33□□□□□ -1.24
HMGB1P16-201ENST00000447155 FAM157BP0CG42 384 aa7.33□□□□□ -1.24
HMGB1P16-201ENST00000447155 FGD1P98174 961 aa7.33□□□□□ -1.24
HMGB1P16-201ENST00000447155 XKR5Q6UX68 686 aa7.33□□□□□ -1.24
HMGB1P16-201ENST00000447155 NIF3L1Q9GZT8 377 aa7.33□□□□□ -1.24
HMGB1P16-201ENST00000447155 BRD7Q9NPI1 651 aa7.33□□□□□ -1.24
HMGB1P16-201ENST00000447155 USP20Q9Y2K6 914 aa7.33□□□□□ -1.24
HMGB1P16-201ENST00000447155 PCDHGC4Q9Y5F7 938 aa7.33□□□□□ -1.24
HMGB1P16-201ENST00000447155 KCNMB2Q9Y691 235 aa7.33□□□□□ -1.24
HMGB1P16-201ENST00000447155 UBAP1LF5GYI3 381 aa7.32□□□□□ -1.24
HMGB1P16-201ENST00000447155 THBS1P07996 1170 aa7.32□□□□□ -1.24
HMGB1P16-201ENST00000447155 MAPK8P45983 427 aa7.32□□□□□ -1.24
HMGB1P16-201ENST00000447155 KCNQ4P56696 695 aa7.32□□□□□ -1.24
HMGB1P16-201ENST00000447155 TRIP4Q15650 581 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P16-201ENST00000447155 PDE12Q6L8Q7 609 aaKnown RBP7.32□□□□□ -1.24
HMGB1P16-201ENST00000447155 Q6ZNB5 142 aa7.32□□□□□ -1.24
HMGB1P16-201ENST00000447155 CUEDC1Q9NWM3 386 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P16-201ENST00000447155 KCNH4Q9UQ05 1017 aa7.32□□□□□ -1.24
HMGB1P16-201ENST00000447155 EFSO43281 561 aa7.31□□□□□ -1.24
HMGB1P16-201ENST00000447155 EGFRP00533 1210 aa7.31□□□□□ -1.24
HMGB1P16-201ENST00000447155 SNRPBP14678 240 aaKnown RBP7.31□□□□□ -1.24
HMGB1P16-201ENST00000447155 ITGA6P23229 1130 aa7.31□□□□□ -1.24
HMGB1P16-201ENST00000447155 GRNP28799 593 aaKnown RBP7.31□□□□□ -1.24
HMGB1P16-201ENST00000447155 ATP2B2Q01814 1243 aa7.31□□□□□ -1.24
HMGB1P16-201ENST00000447155 LAMC2Q13753 1193 aa7.31□□□□□ -1.24
HMGB1P16-201ENST00000447155 UBAP2LQ14157 1087 aaKnown RBP7.31□□□□□ -1.24
HMGB1P16-201ENST00000447155 DBN1Q16643 649 aa7.31□□□□□ -1.24
HMGB1P16-201ENST00000447155 BCL11AQ9H165 835 aa7.31□□□□□ -1.24
HMGB1P16-201ENST00000447155 A6NHS1 94 aa7.3□□□□□ -1.24
HMGB1P16-201ENST00000447155 UNCXA6NJT0 531 aa7.3□□□□□ -1.24
HMGB1P16-201ENST00000447155 C11orf95C9JLR9 678 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P16-201ENST00000447155 XYLBO75191 536 aa7.3□□□□□ -1.24
HMGB1P16-201ENST00000447155 LDHBP07195 334 aaKnown RBP7.3□□□□□ -1.24
HMGB1P16-201ENST00000447155 TNP2Q05952 138 aa7.3□□□□□ -1.24
HMGB1P16-201ENST00000447155 ENOX2Q16206 610 aaKnown RBP7.3□□□□□ -1.24
HMGB1P16-201ENST00000447155 ZNF438Q7Z4V0 828 aa7.3□□□□□ -1.24
HMGB1P16-201ENST00000447155 CSRNP1Q96S65 589 aa7.3□□□□□ -1.24
HMGB1P16-201ENST00000447155 DNAJC25Q9H1X3 360 aa7.3□□□□□ -1.24
HMGB1P16-201ENST00000447155 PNMA6FA0A0J9YX94 578 aa7.29□□□□□ -1.24
HMGB1P16-201ENST00000447155 DCDC2BA2VCK2 349 aa7.29□□□□□ -1.24
HMGB1P16-201ENST00000447155 KHNYNO15037 678 aaKnown RBP7.29□□□□□ -1.24
HMGB1P16-201ENST00000447155 PRPF40AO75400 957 aaKnown RBP7.29□□□□□ -1.24
HMGB1P16-201ENST00000447155 MAPTP10636 758 aaKnown RBP7.29□□□□□ -1.24
HMGB1P16-201ENST00000447155 TAGLNQ01995 201 aaKnown RBP7.29□□□□□ -1.24
HMGB1P16-201ENST00000447155 SFSWAPQ12872 951 aaKnown RBP7.29□□□□□ -1.24
HMGB1P16-201ENST00000447155 ALG1LQ6GMV1 187 aa7.29□□□□□ -1.24
HMGB1P16-201ENST00000447155 ZNF837Q96EG3 531 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P16-201ENST00000447155 ELP3Q9H9T3 547 aa7.29□□□□□ -1.24
HMGB1P16-201ENST00000447155 NDFIP2Q9NV92 336 aa7.29□□□□□ -1.24
HMGB1P16-201ENST00000447155 EIF1AYO14602 144 aaKnown RBP7.28□□□□□ -1.24
HMGB1P16-201ENST00000447155 BNIP3LO60238 219 aa7.28□□□□□ -1.24
HMGB1P16-201ENST00000447155 CPNE3O75131 537 aaKnown RBP7.28□□□□□ -1.24
HMGB1P16-201ENST00000447155 TNFRSF21O75509 655 aa7.28□□□□□ -1.24
HMGB1P16-201ENST00000447155 ORC1Q13415 861 aa7.28□□□□□ -1.24
HMGB1P16-201ENST00000447155 NLRP13Q86W25 1043 aa7.28□□□□□ -1.24
HMGB1P16-201ENST00000447155 SNX29Q8TEQ0 813 aa7.28□□□□□ -1.24
HMGB1P16-201ENST00000447155 MARK1Q9P0L2 795 aa7.28□□□□□ -1.24
HMGB1P16-201ENST00000447155 LCE2BO14633 110 aa7.27□□□□□ -1.25
HMGB1P16-201ENST00000447155 PPFIA3O75145 1194 aa7.27□□□□□ -1.25
HMGB1P16-201ENST00000447155 CCINQ13939 588 aa7.27□□□□□ -1.25
HMGB1P16-201ENST00000447155 FBF1Q8TES7 1133 aa7.27□□□□□ -1.25
HMGB1P16-201ENST00000447155 GTPBP3Q969Y2 492 aaKnown RBP7.27□□□□□ -1.25
HMGB1P16-201ENST00000447155 MRRFQ96E11 262 aaKnown RBP7.27□□□□□ -1.25
HMGB1P16-201ENST00000447155 FOXD3Q9UJU5 478 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P16-201ENST00000447155 ATXN7L1Q9ULK2 861 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P16-201ENST00000447155 PHF24Q9UPV7 400 aa7.27□□□□□ -1.25
HMGB1P16-201ENST00000447155 PHACTR2O75167 634 aa7.26□□□□□ -1.25
HMGB1P16-201ENST00000447155 FOXR1Q6PIV2 292 aa7.26□□□□□ -1.25
HMGB1P16-201ENST00000447155 ABHD17AQ96GS6 310 aa7.26□□□□□ -1.25
HMGB1P16-201ENST00000447155 CFHR5Q9BXR6 569 aa7.26□□□□□ -1.25
HMGB1P16-201ENST00000447155 GSX2Q9BZM3 304 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms