RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 NUTM1Q86Y26 1132 aa20.25■□□□□ 0.83
HMGB2-203ENST00000446922 CRAMP1Q96RY5 1269 aa20.25■□□□□ 0.83
HMGB2-203ENST00000446922 IFT57Q9NWB7 429 aa20.25■□□□□ 0.83
HMGB2-203ENST00000446922 DBF4Q9UBU7 674 aaPredicted RBP20.25■□□□□ 0.83
HMGB2-203ENST00000446922 APAF1O14727 1248 aa20.24■□□□□ 0.83
HMGB2-203ENST00000446922 PROSER3Q2NL68 480 aa20.24■□□□□ 0.83
HMGB2-203ENST00000446922 SMC1BQ8NDV3 1235 aa20.24■□□□□ 0.83
HMGB2-203ENST00000446922 RPGRQ92834 1020 aaKnown RBP20.24■□□□□ 0.83
HMGB2-203ENST00000446922 NLRP3Q96P20 1036 aa20.24■□□□□ 0.83
HMGB2-203ENST00000446922 UTP14AQ9BVJ6 771 aaKnown RBP20.24■□□□□ 0.83
HMGB2-203ENST00000446922 ABCC12Q96J65 1359 aa20.23■□□□□ 0.83
HMGB2-203ENST00000446922 TCIRG1Q13488 830 aa20.23■□□□□ 0.83
HMGB2-203ENST00000446922 NCBP3Q53F19 620 aaKnown RBP20.23■□□□□ 0.83
HMGB2-203ENST00000446922 HDGFL1Q5TGJ6 251 aa20.23■□□□□ 0.83
HMGB2-203ENST00000446922 TIAM2Q8IVF5 1701 aa20.23■□□□□ 0.83
HMGB2-203ENST00000446922 XAGE3Q8WTP9 111 aa20.23■□□□□ 0.83
HMGB2-203ENST00000446922 RBM17Q96I25 401 aaKnown RBP20.23■□□□□ 0.83
HMGB2-203ENST00000446922 HYPKQ9NX55 129 aa20.23■□□□□ 0.83
HMGB2-203ENST00000446922 PSMD1Q99460 953 aa20.22■□□□□ 0.83
HMGB2-203ENST00000446922 WDR90Q96KV7 1748 aa20.22■□□□□ 0.83
HMGB2-203ENST00000446922 ANXA1P04083 346 aa20.21■□□□□ 0.83
HMGB2-203ENST00000446922 AIMP1Q12904 312 aaKnown RBP20.21■□□□□ 0.83
HMGB2-203ENST00000446922 KRT24Q2M2I5 525 aa20.21■□□□□ 0.83
HMGB2-203ENST00000446922 NLRP10Q86W26 655 aa20.21■□□□□ 0.83
HMGB2-203ENST00000446922 PLBD2Q8NHP8 589 aa20.21■□□□□ 0.83
HMGB2-203ENST00000446922 NECTIN2Q92692 538 aa20.21■□□□□ 0.83
HMGB2-203ENST00000446922 MBIPQ9NS73 344 aa20.21■□□□□ 0.83
HMGB2-203ENST00000446922 CACNA1SQ13698 1873 aa20.21■□□□□ 0.83
HMGB2-203ENST00000446922 POTECB2RU33 542 aa20.2■□□□□ 0.82
HMGB2-203ENST00000446922 DUSP27Q5VZP5 1158 aa20.2■□□□□ 0.82
HMGB2-203ENST00000446922 ANKRD13DQ6ZTN6 518 aa20.2■□□□□ 0.82
HMGB2-203ENST00000446922 CHPF2Q9P2E5 772 aa20.2■□□□□ 0.82
HMGB2-203ENST00000446922 ZNF316A6NFI3 1004 aaPredicted RBP20.19■□□□□ 0.82
HMGB2-203ENST00000446922 CCDC27Q2M243 656 aa20.19■□□□□ 0.82
HMGB2-203ENST00000446922 SYNE4Q8N205 404 aa20.19■□□□□ 0.82
HMGB2-203ENST00000446922 VPS33BQ9H267 617 aa20.19■□□□□ 0.82
HMGB2-203ENST00000446922 TMX4Q9H1E5 349 aaPredicted RBP20.18■□□□□ 0.82
HMGB2-203ENST00000446922 SNED1Q8TER0 1413 aa20.18■□□□□ 0.82
HMGB2-203ENST00000446922 BBOX1O75936 387 aa20.17■□□□□ 0.82
HMGB2-203ENST00000446922 IARSP41252 1262 aaKnown RBP20.17■□□□□ 0.82
HMGB2-203ENST00000446922 TRIM28Q13263 835 aaKnown RBP20.17■□□□□ 0.82
HMGB2-203ENST00000446922 DNAJC5GQ8N7S2 189 aa20.17■□□□□ 0.82
HMGB2-203ENST00000446922 L3MBTL3Q96JM7 780 aaPredicted RBP20.17■□□□□ 0.82
HMGB2-203ENST00000446922 ANKRD36CQ5JPF3 1778 aa20.16■□□□□ 0.82
HMGB2-203ENST00000446922 IQCA1LA6NCM1 817 aa20.16■□□□□ 0.82
HMGB2-203ENST00000446922 DDNO94850 711 aaPredicted RBP20.16■□□□□ 0.82
HMGB2-203ENST00000446922 ZNF277Q9NRM2 450 aaPredicted RBP20.16■□□□□ 0.82
HMGB2-203ENST00000446922 TRMT112Q9UI30 125 aaKnown RBP20.16■□□□□ 0.82
HMGB2-203ENST00000446922 SH3TC1Q8TE82 1336 aa20.16■□□□□ 0.82
HMGB2-203ENST00000446922 FZD9O00144 591 aa20.15■□□□□ 0.82
HMGB2-203ENST00000446922 JDP2Q8WYK2 163 aa20.15■□□□□ 0.82
HMGB2-203ENST00000446922 ISCA1Q9BUE6 129 aa20.15■□□□□ 0.82
HMGB2-203ENST00000446922 PPEF1O14829 653 aaPredicted RBP20.14■□□□□ 0.81
HMGB2-203ENST00000446922 ANP32CO43423 234 aa20.14■□□□□ 0.81
HMGB2-203ENST00000446922 OLFM4Q6UX06 510 aa20.14■□□□□ 0.81
HMGB2-203ENST00000446922 ATP6V0A2Q9Y487 856 aa20.14■□□□□ 0.81
HMGB2-203ENST00000446922 TMC4Q7Z404 712 aa20.13■□□□□ 0.81
HMGB2-203ENST00000446922 HSP90B1P14625 803 aaKnown RBP20.12■□□□□ 0.81
HMGB2-203ENST00000446922 CCDC30Q5VVM6 783 aa20.12■□□□□ 0.81
HMGB2-203ENST00000446922 C3orf67Q6ZVT6 689 aa20.12■□□□□ 0.81
HMGB2-203ENST00000446922 DDX46Q7L014 1031 aaKnown RBP20.12■□□□□ 0.81
HMGB2-203ENST00000446922 SP8Q8IXZ3 490 aa20.12■□□□□ 0.81
HMGB2-203ENST00000446922 SUPT20HQ8NEM7 779 aa20.12■□□□□ 0.81
HMGB2-203ENST00000446922 IL16Q14005 1332 aa20.11■□□□□ 0.81
HMGB2-203ENST00000446922 GOLGA2Q08379 1002 aa20.11■□□□□ 0.81
HMGB2-203ENST00000446922 CCDC184Q52MB2 194 aa20.11■□□□□ 0.81
HMGB2-203ENST00000446922 GPC2Q8N158 579 aa20.11■□□□□ 0.81
HMGB2-203ENST00000446922 RTFDC1Q9BY42 306 aaPredicted RBP20.11■□□□□ 0.81
HMGB2-203ENST00000446922 SCN4AP35499 1836 aa20.11■□□□□ 0.81
HMGB2-203ENST00000446922 HCLS1P14317 486 aaPredicted RBP20.1■□□□□ 0.81
HMGB2-203ENST00000446922 WWC1Q8IX03 1113 aa20.1■□□□□ 0.81
HMGB2-203ENST00000446922 C8orf58Q8NAV2 365 aa20.1■□□□□ 0.81
HMGB2-203ENST00000446922 ABCC4O15439 1325 aa20.09■□□□□ 0.81
HMGB2-203ENST00000446922 EIF6P56537 245 aaKnown RBP20.09■□□□□ 0.81
HMGB2-203ENST00000446922 GRAPQ13588 217 aa20.09■□□□□ 0.81
HMGB2-203ENST00000446922 SF3B3Q15393 1217 aaKnown RBP20.09■□□□□ 0.81
HMGB2-203ENST00000446922 CHADLQ6NUI6 762 aa20.09■□□□□ 0.81
HMGB2-203ENST00000446922 RIC3Q7Z5B4 369 aa20.09■□□□□ 0.81
HMGB2-203ENST00000446922 GRAPLQ8TC17 118 aaPredicted RBP20.09■□□□□ 0.81
HMGB2-203ENST00000446922 TAF1DQ9H5J8 278 aaPredicted RBP20.09■□□□□ 0.81
HMGB2-203ENST00000446922 MRS2Q9HD23 443 aa20.09■□□□□ 0.81
HMGB2-203ENST00000446922 DDX58O95786 925 aaKnown RBP20.08■□□□□ 0.81
HMGB2-203ENST00000446922 PNMA8AQ86V59 439 aaPredicted RBP20.08■□□□□ 0.81
HMGB2-203ENST00000446922 LDHDQ86WU2 507 aa20.08■□□□□ 0.81
HMGB2-203ENST00000446922 KLRG1Q96E93 195 aa20.08■□□□□ 0.81
HMGB2-203ENST00000446922 HACL1Q9UJ83 578 aa20.08■□□□□ 0.81
HMGB2-203ENST00000446922 ZNF541Q9H0D2 1346 aa20.07■□□□□ 0.8
HMGB2-203ENST00000446922 ELL2O00472 640 aaPredicted RBP20.07■□□□□ 0.8
HMGB2-203ENST00000446922 LARGE2Q8N3Y3 721 aa20.07■□□□□ 0.8
HMGB2-203ENST00000446922 CCDC191Q8NCU4 936 aa20.07■□□□□ 0.8
HMGB2-203ENST00000446922 FAM89AQ96GI7 184 aa20.07■□□□□ 0.8
HMGB2-203ENST00000446922 PHAXQ9H814 394 aaKnown RBP20.07■□□□□ 0.8
HMGB2-203ENST00000446922 ATP5J2-PTCD1G3V325 749 aa20.06■□□□□ 0.8
HMGB2-203ENST00000446922 MPNDQ8N594 471 aa20.06■□□□□ 0.8
HMGB2-203ENST00000446922 ZBTB38Q8NAP3 1195 aaPredicted RBP20.06■□□□□ 0.8
HMGB2-203ENST00000446922 DPP8Q6V1X1 898 aaPredicted RBP20.05■□□□□ 0.8
HMGB2-203ENST00000446922 WDR63Q8IWG1 891 aa20.05■□□□□ 0.8
HMGB2-203ENST00000446922 JMYQ8N9B5 988 aa20.05■□□□□ 0.8
HMGB2-203ENST00000446922 LAMB2P55268 1798 aa20.04■□□□□ 0.8
HMGB2-203ENST00000446922 TCERG1O14776 1098 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms