RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 CDK12Q9NYV4 1490 aaPredicted RBP16.8■□□□□ 0.28
SMARCA4-204ENST00000444061 MINDY4BA8MYZ0 360 aa16.8■□□□□ 0.28
SMARCA4-204ENST00000444061 FOSBP53539 338 aa16.8■□□□□ 0.28
SMARCA4-204ENST00000444061 BAG3O95817 575 aa16.8■□□□□ 0.28
SMARCA4-204ENST00000444061 USP19O94966 1318 aa16.8■□□□□ 0.28
SMARCA4-204ENST00000444061 H0YIN7 160 aa16.79■□□□□ 0.28
SMARCA4-204ENST00000444061 ZNF804AQ7Z570 1209 aa16.79■□□□□ 0.28
SMARCA4-204ENST00000444061 ERBB4Q15303 1308 aa16.79■□□□□ 0.28
SMARCA4-204ENST00000444061 IQSEC3Q9UPP2 1182 aaPredicted RBP16.79■□□□□ 0.28
SMARCA4-204ENST00000444061 RICTORQ6R327 1708 aa16.79■□□□□ 0.28
SMARCA4-204ENST00000444061 PDE8AO60658 829 aa16.79■□□□□ 0.28
SMARCA4-204ENST00000444061 OGFOD1Q8N543 542 aa16.79■□□□□ 0.28
SMARCA4-204ENST00000444061 USP31Q70CQ4 1352 aa16.79■□□□□ 0.28
SMARCA4-204ENST00000444061 TTLL12Q14166 644 aaPredicted RBP16.79■□□□□ 0.28
SMARCA4-204ENST00000444061 KRT32Q14532 448 aa16.79■□□□□ 0.28
SMARCA4-204ENST00000444061 HELBQ8NG08 1087 aaPredicted RBP16.79■□□□□ 0.28
SMARCA4-204ENST00000444061 PA2G4Q9UQ80 394 aaKnown RBP16.79■□□□□ 0.28
SMARCA4-204ENST00000444061 PTPRUQ92729 1446 aa16.78■□□□□ 0.28
SMARCA4-204ENST00000444061 CCDC69A6NI79 296 aa16.78■□□□□ 0.28
SMARCA4-204ENST00000444061 RABEP1Q15276 862 aa16.78■□□□□ 0.28
SMARCA4-204ENST00000444061 BLOC1S2Q6QNY1 142 aa16.78■□□□□ 0.28
SMARCA4-204ENST00000444061 MKNK2Q9HBH9 465 aa16.78■□□□□ 0.28
SMARCA4-204ENST00000444061 MYO1BO43795 1136 aa16.78■□□□□ 0.28
SMARCA4-204ENST00000444061 HDAC9Q9UKV0 1011 aa16.78■□□□□ 0.28
SMARCA4-204ENST00000444061 EVI5LQ96CN4 794 aa16.78■□□□□ 0.28
SMARCA4-204ENST00000444061 MCM2P49736 904 aa16.78■□□□□ 0.28
SMARCA4-204ENST00000444061 ZGPATQ8N5A5 531 aaKnown RBP16.78■□□□□ 0.28
SMARCA4-204ENST00000444061 MPHOSPH10O00566 681 aaKnown RBP16.77■□□□□ 0.28
SMARCA4-204ENST00000444061 MSL1Q68DK7 614 aa16.77■□□□□ 0.28
SMARCA4-204ENST00000444061 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.77■□□□□ 0.28
SMARCA4-204ENST00000444061 U3KPZ7 1027 aaPredicted RBP16.77■□□□□ 0.28
SMARCA4-204ENST00000444061 PLEKHF1Q96S99 279 aa16.77■□□□□ 0.28
SMARCA4-204ENST00000444061 CRKLP46109 303 aaKnown RBP16.77■□□□□ 0.27
SMARCA4-204ENST00000444061 NUP133Q8WUM0 1156 aa16.77■□□□□ 0.27
SMARCA4-204ENST00000444061 BICC1Q9H694 974 aaKnown RBP16.77■□□□□ 0.27
SMARCA4-204ENST00000444061 NCOA3Q9Y6Q9 1424 aa16.77■□□□□ 0.27
SMARCA4-204ENST00000444061 TCIRG1Q13488 830 aa16.77■□□□□ 0.27
SMARCA4-204ENST00000444061 NLGN1Q8N2Q7 840 aa16.77■□□□□ 0.27
SMARCA4-204ENST00000444061 KDM4AO75164 1064 aa16.76■□□□□ 0.27
SMARCA4-204ENST00000444061 ANKRD1Q15327 319 aa16.76■□□□□ 0.27
SMARCA4-204ENST00000444061 CCDC24Q8N4L8 307 aa16.76■□□□□ 0.27
SMARCA4-204ENST00000444061 TNNQ9UQP3 1299 aa16.76■□□□□ 0.27
SMARCA4-204ENST00000444061 DNTTIP2Q5QJE6 756 aaKnown RBP16.76■□□□□ 0.27
SMARCA4-204ENST00000444061 GSTO1P78417 241 aa16.76■□□□□ 0.27
SMARCA4-204ENST00000444061 PIGBQ92521 554 aa16.75■□□□□ 0.27
SMARCA4-204ENST00000444061 CCDC43Q96MW1 224 aaKnown RBP16.75■□□□□ 0.27
SMARCA4-204ENST00000444061 CPSF1Q10570 1443 aaKnown RBP16.75■□□□□ 0.27
SMARCA4-204ENST00000444061 RIMBP2O15034 1052 aa16.75■□□□□ 0.27
SMARCA4-204ENST00000444061 ITGA6P23229 1130 aa16.75■□□□□ 0.27
SMARCA4-204ENST00000444061 TRIM22Q8IYM9 498 aa16.75■□□□□ 0.27
SMARCA4-204ENST00000444061 CYP27B1O15528 508 aa16.74■□□□□ 0.27
SMARCA4-204ENST00000444061 HDAC1Q13547 482 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-204ENST00000444061 RLBP1P12271 317 aa16.74■□□□□ 0.27
SMARCA4-204ENST00000444061 JAKMIP1Q96N16 626 aaKnown RBP16.74■□□□□ 0.27
SMARCA4-204ENST00000444061 REREQ9P2R6 1566 aa16.74■□□□□ 0.27
SMARCA4-204ENST00000444061 F8W031 263 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-204ENST00000444061 WDHD1O75717 1129 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-204ENST00000444061 GCKRQ14397 625 aa16.74■□□□□ 0.27
SMARCA4-204ENST00000444061 IL6STP40189 918 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-204ENST00000444061 TTLL7Q6ZT98 887 aa16.73■□□□□ 0.27
SMARCA4-204ENST00000444061 ZBTB1Q9Y2K1 713 aa16.73■□□□□ 0.27
SMARCA4-204ENST00000444061 ZNF444Q8N0Y2 327 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-204ENST00000444061 SOS2Q07890 1332 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-204ENST00000444061 QRICH2Q9H0J4 1663 aa16.73■□□□□ 0.27
SMARCA4-204ENST00000444061 KCNQ4P56696 695 aa16.73■□□□□ 0.27
SMARCA4-204ENST00000444061 VPS72Q15906 364 aa16.73■□□□□ 0.27
SMARCA4-204ENST00000444061 USPL1Q5W0Q7 1092 aa16.73■□□□□ 0.27
SMARCA4-204ENST00000444061 CEP85Q6P2H3 762 aa16.73■□□□□ 0.27
SMARCA4-204ENST00000444061 PAXIP1Q6ZW49 1069 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-204ENST00000444061 PCDHB15Q9Y5E8 787 aa16.73■□□□□ 0.27
SMARCA4-204ENST00000444061 TECPR2O15040 1411 aa16.73■□□□□ 0.27
SMARCA4-204ENST00000444061 CRB1P82279 1406 aa16.72■□□□□ 0.27
SMARCA4-204ENST00000444061 VWDEQ8N2E2 1590 aa16.72■□□□□ 0.27
SMARCA4-204ENST00000444061 TPM4P67936 248 aa16.72■□□□□ 0.27
SMARCA4-204ENST00000444061 GZF1Q9H116 711 aaPredicted RBP16.72■□□□□ 0.27
SMARCA4-204ENST00000444061 UFL1O94874 794 aa16.72■□□□□ 0.27
SMARCA4-204ENST00000444061 EYA2O00167 538 aa16.71■□□□□ 0.27
SMARCA4-204ENST00000444061 HLA-DOAP06340 250 aa16.71■□□□□ 0.27
SMARCA4-204ENST00000444061 MSNP26038 577 aaKnown RBP16.71■□□□□ 0.27
SMARCA4-204ENST00000444061 PDE6BP35913 854 aa16.71■□□□□ 0.27
SMARCA4-204ENST00000444061 RNF41Q9H4P4 317 aaPredicted RBP16.71■□□□□ 0.27
SMARCA4-204ENST00000444061 DIP2AQ14689 1571 aa16.71■□□□□ 0.27
SMARCA4-204ENST00000444061 PDCP20941 246 aa16.71■□□□□ 0.27
SMARCA4-204ENST00000444061 NUCB2P80303 420 aa16.71■□□□□ 0.27
SMARCA4-204ENST00000444061 TSHZ3Q63HK5 1081 aa16.71■□□□□ 0.27
SMARCA4-204ENST00000444061 DRC7Q8IY82 874 aa16.71■□□□□ 0.27
SMARCA4-204ENST00000444061 PALLDQ8WX93 1383 aa16.71■□□□□ 0.27
SMARCA4-204ENST00000444061 ZNF213O14771 459 aa16.71■□□□□ 0.26
SMARCA4-204ENST00000444061 CYP7A1P22680 504 aa16.71■□□□□ 0.26
SMARCA4-204ENST00000444061 CRNKL1Q9BZJ0 848 aaKnown RBP16.71■□□□□ 0.26
SMARCA4-204ENST00000444061 CLEC11AQ9Y240 323 aa16.71■□□□□ 0.26
SMARCA4-204ENST00000444061 ALDH1B1P30837 517 aa16.7■□□□□ 0.26
SMARCA4-204ENST00000444061 RANBP6O60518 1105 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-204ENST00000444061 ZFYP08048 801 aaPredicted RBP16.7■□□□□ 0.26
SMARCA4-204ENST00000444061 STK3Q13188 491 aa16.7■□□□□ 0.26
SMARCA4-204ENST00000444061 DCCP43146 1447 aa16.7■□□□□ 0.26
SMARCA4-204ENST00000444061 MAP3K15Q6ZN16 1313 aa16.7■□□□□ 0.26
SMARCA4-204ENST00000444061 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-204ENST00000444061 SOGA3Q5TF21 947 aa16.7■□□□□ 0.26
SMARCA4-204ENST00000444061 NAA16Q6N069 864 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms