RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 RRAGCQ9HB90 399 aa26■■□□□ 1.75
LRCH3-208ENST00000443727 TCIRG1Q13488 830 aa25.99■■□□□ 1.75
LRCH3-208ENST00000443727 GLTPD2A6NH11 291 aa25.98■■□□□ 1.75
LRCH3-208ENST00000443727 DPY19L2Q6NUT2 758 aa25.98■■□□□ 1.75
LRCH3-208ENST00000443727 ANKRD13DQ6ZTN6 518 aa25.98■■□□□ 1.75
LRCH3-208ENST00000443727 NLRP10Q86W26 655 aa25.98■■□□□ 1.75
LRCH3-208ENST00000443727 RTKN2Q8IZC4 609 aa25.98■■□□□ 1.75
LRCH3-208ENST00000443727 PLBD2Q8NHP8 589 aa25.98■■□□□ 1.75
LRCH3-208ENST00000443727 RBM17Q96I25 401 aaKnown RBP25.98■■□□□ 1.75
LRCH3-208ENST00000443727 NLRP3Q96P20 1036 aa25.98■■□□□ 1.75
LRCH3-208ENST00000443727 TNRC6CQ9HCJ0 1690 aaKnown RBP25.98■■□□□ 1.75
LRCH3-208ENST00000443727 RIC1Q4ADV7 1423 aa25.97■■□□□ 1.75
LRCH3-208ENST00000443727 ARFGEF2Q9Y6D5 1785 aa25.97■■□□□ 1.75
LRCH3-208ENST00000443727 TRMT112Q9UI30 125 aaKnown RBP25.97■■□□□ 1.75
LRCH3-208ENST00000443727 FER1L6Q2WGJ9 1857 aa25.96■■□□□ 1.75
LRCH3-208ENST00000443727 RNF123Q5XPI4 1314 aa25.96■■□□□ 1.75
LRCH3-208ENST00000443727 HOXA10P31260 410 aaPredicted RBP25.96■■□□□ 1.75
LRCH3-208ENST00000443727 CCDC27Q2M243 656 aa25.96■■□□□ 1.75
LRCH3-208ENST00000443727 OLFM4Q6UX06 510 aa25.96■■□□□ 1.75
LRCH3-208ENST00000443727 C8orf58Q8NAV2 365 aa25.96■■□□□ 1.75
LRCH3-208ENST00000443727 CHMP4AQ9BY43 222 aa25.96■■□□□ 1.75
LRCH3-208ENST00000443727 HSPA6P17066 643 aa25.95■■□□□ 1.74
LRCH3-208ENST00000443727 FKBP4Q02790 459 aaKnown RBP eCLIP25.95■■□□□ 1.74
LRCH3-208ENST00000443727 WWC1Q8IX03 1113 aa25.95■■□□□ 1.74
LRCH3-208ENST00000443727 CCDC88AQ3V6T2 1871 aa25.94■■□□□ 1.74
LRCH3-208ENST00000443727 SLC10A5Q5PT55 438 aa25.94■■□□□ 1.74
LRCH3-208ENST00000443727 C3orf67Q6ZVT6 689 aa25.94■■□□□ 1.74
LRCH3-208ENST00000443727 TIAM2Q8IVF5 1701 aa25.94■■□□□ 1.74
LRCH3-208ENST00000443727 GOLGA2Q08379 1002 aa25.93■■□□□ 1.74
LRCH3-208ENST00000443727 TSR2Q969E8 191 aaKnown RBP25.93■■□□□ 1.74
LRCH3-208ENST00000443727 CRAMP1Q96RY5 1269 aa25.93■■□□□ 1.74
LRCH3-208ENST00000443727 ZNF277Q9NRM2 450 aaPredicted RBP25.93■■□□□ 1.74
LRCH3-208ENST00000443727 SH3TC1Q8TE82 1336 aa25.92■■□□□ 1.74
LRCH3-208ENST00000443727 TCERG1O14776 1098 aaKnown RBP25.92■■□□□ 1.74
LRCH3-208ENST00000443727 HCLS1P14317 486 aaPredicted RBP25.92■■□□□ 1.74
LRCH3-208ENST00000443727 VEGFAP15692 232 aaPredicted RBP25.92■■□□□ 1.74
LRCH3-208ENST00000443727 CCDC30Q5VVM6 783 aa25.92■■□□□ 1.74
LRCH3-208ENST00000443727 CC2D2BQ6DHV5 1058 aa25.92■■□□□ 1.74
LRCH3-208ENST00000443727 RIC3Q7Z5B4 369 aa25.92■■□□□ 1.74
LRCH3-208ENST00000443727 RBM46Q8TBY0 533 aaKnown RBP25.92■■□□□ 1.74
LRCH3-208ENST00000443727 ZNF428Q96B54 188 aa25.92■■□□□ 1.74
LRCH3-208ENST00000443727 TMX4Q9H1E5 349 aaPredicted RBP25.92■■□□□ 1.74
LRCH3-208ENST00000443727 SALL2Q9Y467 1007 aaPredicted RBP25.92■■□□□ 1.74
LRCH3-208ENST00000443727 ATP5J2-PTCD1G3V325 749 aa25.91■■□□□ 1.74
LRCH3-208ENST00000443727 ANKRD36CQ5JPF3 1778 aa25.9■■□□□ 1.74
LRCH3-208ENST00000443727 PPEF1O14829 653 aaPredicted RBP25.9■■□□□ 1.74
LRCH3-208ENST00000443727 FAM9BQ8IZU0 186 aa25.9■■□□□ 1.74
LRCH3-208ENST00000443727 SYNE4Q8N205 404 aa25.9■■□□□ 1.74
LRCH3-208ENST00000443727 PHAXQ9H814 394 aaKnown RBP25.89■■□□□ 1.74
LRCH3-208ENST00000443727 IL16Q14005 1332 aa25.88■■□□□ 1.73
LRCH3-208ENST00000443727 GRIPAP1Q4V328 841 aa25.88■■□□□ 1.73
LRCH3-208ENST00000443727 NCBP3Q53F19 620 aaKnown RBP25.88■■□□□ 1.73
LRCH3-208ENST00000443727 TSPYL6Q8N831 410 aa25.88■■□□□ 1.73
LRCH3-208ENST00000443727 ISCA1Q9BUE6 129 aa25.88■■□□□ 1.73
LRCH3-208ENST00000443727 IARSP41252 1262 aaKnown RBP25.87■■□□□ 1.73
LRCH3-208ENST00000443727 DDX58O95786 925 aaKnown RBP25.86■■□□□ 1.73
LRCH3-208ENST00000443727 FSTL1Q12841 308 aa25.86■■□□□ 1.73
LRCH3-208ENST00000443727 DDX46Q7L014 1031 aaKnown RBP25.86■■□□□ 1.73
LRCH3-208ENST00000443727 FAM89AQ96GI7 184 aa25.86■■□□□ 1.73
LRCH3-208ENST00000443727 PSMD1Q99460 953 aa25.86■■□□□ 1.73
LRCH3-208ENST00000443727 STK31Q9BXU1 1019 aa25.86■■□□□ 1.73
LRCH3-208ENST00000443727 DICER1Q9UPY3 1922 aaKnown RBP25.86■■□□□ 1.73
LRCH3-208ENST00000443727 DDNO94850 711 aaPredicted RBP25.85■■□□□ 1.73
LRCH3-208ENST00000443727 ABCC4O15439 1325 aa25.85■■□□□ 1.73
LRCH3-208ENST00000443727 TWISTNBQ3B726 338 aaPredicted RBP25.84■■□□□ 1.73
LRCH3-208ENST00000443727 RTL5Q5HYW3 569 aaPredicted RBP25.84■■□□□ 1.73
LRCH3-208ENST00000443727 SMC1BQ8NDV3 1235 aa25.84■■□□□ 1.73
LRCH3-208ENST00000443727 JDP2Q8WYK2 163 aa25.84■■□□□ 1.73
LRCH3-208ENST00000443727 BBOX1O75936 387 aa25.83■■□□□ 1.73
LRCH3-208ENST00000443727 APLP1P51693 650 aa25.83■■□□□ 1.73
LRCH3-208ENST00000443727 TRIM28Q13263 835 aaKnown RBP25.83■■□□□ 1.73
LRCH3-208ENST00000443727 WDR63Q8IWG1 891 aa25.83■■□□□ 1.73
LRCH3-208ENST00000443727 MYD88Q99836 296 aa25.83■■□□□ 1.73
LRCH3-208ENST00000443727 ATP6V0A2Q9Y487 856 aa25.83■■□□□ 1.73
LRCH3-208ENST00000443727 LARGE2Q8N3Y3 721 aa25.8■■□□□ 1.72
LRCH3-208ENST00000443727 FANCIQ9NVI1 1328 aa25.8■■□□□ 1.72
LRCH3-208ENST00000443727 POTECB2RU33 542 aa25.79■■□□□ 1.72
LRCH3-208ENST00000443727 IRS4O14654 1257 aaPredicted RBP25.79■■□□□ 1.72
LRCH3-208ENST00000443727 HSP90B1P14625 803 aaKnown RBP25.79■■□□□ 1.72
LRCH3-208ENST00000443727 GRAPQ13588 217 aa25.79■■□□□ 1.72
LRCH3-208ENST00000443727 SLC51AQ86UW1 340 aa25.79■■□□□ 1.72
LRCH3-208ENST00000443727 GRAPLQ8TC17 118 aaPredicted RBP25.79■■□□□ 1.72
LRCH3-208ENST00000443727 MAP3K2Q9Y2U5 619 aa25.79■■□□□ 1.72
LRCH3-208ENST00000443727 ZNF541Q9H0D2 1346 aa25.79■■□□□ 1.72
LRCH3-208ENST00000443727 WDR90Q96KV7 1748 aa25.79■■□□□ 1.72
LRCH3-208ENST00000443727 SNED1Q8TER0 1413 aa25.79■■□□□ 1.72
LRCH3-208ENST00000443727 IQCA1LA6NCM1 817 aa25.78■■□□□ 1.72
LRCH3-208ENST00000443727 SP8Q8IXZ3 490 aa25.78■■□□□ 1.72
LRCH3-208ENST00000443727 ZBTB38Q8NAP3 1195 aaPredicted RBP25.78■■□□□ 1.72
LRCH3-208ENST00000443727 CCDC191Q8NCU4 936 aa25.78■■□□□ 1.72
LRCH3-208ENST00000443727 METTL22Q9BUU2 404 aaPredicted RBP25.78■■□□□ 1.72
LRCH3-208ENST00000443727 CWC25Q9NXE8 425 aaPredicted RBP25.78■■□□□ 1.72
LRCH3-208ENST00000443727 CEP350Q5VT06 3117 aa25.77■■□□□ 1.72
LRCH3-208ENST00000443727 SLC4A2P04920 1241 aa25.77■■□□□ 1.72
LRCH3-208ENST00000443727 EIF6P56537 245 aaKnown RBP25.77■■□□□ 1.72
LRCH3-208ENST00000443727 DPP8Q6V1X1 898 aaPredicted RBP25.77■■□□□ 1.72
LRCH3-208ENST00000443727 FZD9O00144 591 aa25.76■■□□□ 1.71
LRCH3-208ENST00000443727 SF3B3Q15393 1217 aaKnown RBP25.76■■□□□ 1.71
LRCH3-208ENST00000443727 KSR2Q6VAB6 950 aa25.76■■□□□ 1.71
LRCH3-208ENST00000443727 SUPT20HQ8NEM7 779 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms