RNA–Protein interactions for RNA: ENST00000442869.5

RCL1-206, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 3 BASIC

Gene RCL1, Length 1,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-206ENST00000442869 ABCC12Q96J65 1359 aa16.38■□□□□ 0.21
RCL1-206ENST00000442869 POTECB2RU33 542 aa16.38■□□□□ 0.21
RCL1-206ENST00000442869 ALDH1B1P30837 517 aa16.38■□□□□ 0.21
RCL1-206ENST00000442869 FSTL1Q12841 308 aa16.38■□□□□ 0.21
RCL1-206ENST00000442869 CRY2Q49AN0 593 aa16.37■□□□□ 0.21
RCL1-206ENST00000442869 CCDC93Q567U6 631 aa16.37■□□□□ 0.21
RCL1-206ENST00000442869 COPS6Q7L5N1 327 aa16.37■□□□□ 0.21
RCL1-206ENST00000442869 DNAJC5GQ8N7S2 189 aa16.37■□□□□ 0.21
RCL1-206ENST00000442869 NTSR2O95665 410 aa16.36■□□□□ 0.21
RCL1-206ENST00000442869 AIMP1Q12904 312 aaKnown RBP16.36■□□□□ 0.21
RCL1-206ENST00000442869 HTRA3P83110 453 aa16.35■□□□□ 0.21
RCL1-206ENST00000442869 FKBP4Q02790 459 aaKnown RBP eCLIP16.35■□□□□ 0.21
RCL1-206ENST00000442869 XAGE3Q8WTP9 111 aa16.35■□□□□ 0.21
RCL1-206ENST00000442869 ZNF277Q9NRM2 450 aaPredicted RBP16.35■□□□□ 0.21
RCL1-206ENST00000442869 WDR90Q96KV7 1748 aa16.35■□□□□ 0.21
RCL1-206ENST00000442869 DDNO94850 711 aaPredicted RBP16.34■□□□□ 0.21
RCL1-206ENST00000442869 PPP1R42Q7Z4L9 355 aa16.34■□□□□ 0.21
RCL1-206ENST00000442869 RTKN2Q8IZC4 609 aa16.34■□□□□ 0.21
RCL1-206ENST00000442869 SMC1BQ8NDV3 1235 aa16.34■□□□□ 0.21
RCL1-206ENST00000442869 RNF39Q9H2S5 420 aa16.34■□□□□ 0.21
RCL1-206ENST00000442869 DDX21Q9NR30 783 aaKnown RBP eCLIP16.34■□□□□ 0.21
RCL1-206ENST00000442869 IBTKQ9P2D0 1353 aaPredicted RBP16.34■□□□□ 0.21
RCL1-206ENST00000442869 APAF1O14727 1248 aa16.34■□□□□ 0.21
RCL1-206ENST00000442869 HOXA10P31260 410 aaPredicted RBP16.34■□□□□ 0.21
RCL1-206ENST00000442869 PARP10Q53GL7 1025 aa16.34■□□□□ 0.21
RCL1-206ENST00000442869 C3orf67Q6ZVT6 689 aa16.34■□□□□ 0.21
RCL1-206ENST00000442869 RPGRQ92834 1020 aaKnown RBP16.34■□□□□ 0.21
RCL1-206ENST00000442869 CFAP44Q96MT7 982 aa16.34■□□□□ 0.21
RCL1-206ENST00000442869 ZNF316A6NFI3 1004 aaPredicted RBP16.33■□□□□ 0.2
RCL1-206ENST00000442869 SYNE4Q8N205 404 aa16.33■□□□□ 0.2
RCL1-206ENST00000442869 UTP14AQ9BVJ6 771 aaKnown RBP16.33■□□□□ 0.2
RCL1-206ENST00000442869 CHPF2Q9P2E5 772 aa16.33■□□□□ 0.2
RCL1-206ENST00000442869 RIC1Q4ADV7 1423 aa16.32■□□□□ 0.2
RCL1-206ENST00000442869 SLC10A5Q5PT55 438 aa16.31■□□□□ 0.2
RCL1-206ENST00000442869 HDGFL1Q5TGJ6 251 aa16.31■□□□□ 0.2
RCL1-206ENST00000442869 RBM17Q96I25 401 aaKnown RBP16.31■□□□□ 0.2
RCL1-206ENST00000442869 NLRP3Q96P20 1036 aa16.31■□□□□ 0.2
RCL1-206ENST00000442869 MBIPQ9NS73 344 aa16.31■□□□□ 0.2
RCL1-206ENST00000442869 ANKRD36CQ5JPF3 1778 aa16.31■□□□□ 0.2
RCL1-206ENST00000442869 TCERG1O14776 1098 aaKnown RBP16.3■□□□□ 0.2
RCL1-206ENST00000442869 ZNF853P0CG23 659 aa16.3■□□□□ 0.2
RCL1-206ENST00000442869 TCIRG1Q13488 830 aa16.3■□□□□ 0.2
RCL1-206ENST00000442869 CCDC184Q52MB2 194 aa16.3■□□□□ 0.2
RCL1-206ENST00000442869 SLC51AQ86UW1 340 aa16.3■□□□□ 0.2
RCL1-206ENST00000442869 NLRP10Q86W26 655 aa16.3■□□□□ 0.2
RCL1-206ENST00000442869 CRAMP1Q96RY5 1269 aa16.3■□□□□ 0.2
RCL1-206ENST00000442869 HOXB7P09629 217 aa16.3■□□□□ 0.2
RCL1-206ENST00000442869 IARSP41252 1262 aaKnown RBP16.3■□□□□ 0.2
RCL1-206ENST00000442869 HSP90AB3PQ58FF7 597 aa16.3■□□□□ 0.2
RCL1-206ENST00000442869 DUSP27Q5VZP5 1158 aa16.3■□□□□ 0.2
RCL1-206ENST00000442869 ZNF428Q96B54 188 aa16.3■□□□□ 0.2
RCL1-206ENST00000442869 SNED1Q8TER0 1413 aa16.29■□□□□ 0.2
RCL1-206ENST00000442869 CC2D2BQ6DHV5 1058 aa16.29■□□□□ 0.2
RCL1-206ENST00000442869 ANKRD13DQ6ZTN6 518 aa16.29■□□□□ 0.2
RCL1-206ENST00000442869 PSMD1Q99460 953 aa16.29■□□□□ 0.2
RCL1-206ENST00000442869 DBF4Q9UBU7 674 aaPredicted RBP16.29■□□□□ 0.2
RCL1-206ENST00000442869 POTEIP0CG38 1075 aa16.28■□□□□ 0.2
RCL1-206ENST00000442869 POTEJP0CG39 1038 aa16.28■□□□□ 0.2
RCL1-206ENST00000442869 HCLS1P14317 486 aaPredicted RBP16.28■□□□□ 0.2
RCL1-206ENST00000442869 TRMT112Q9UI30 125 aaKnown RBP16.28■□□□□ 0.2
RCL1-206ENST00000442869 ZNF541Q9H0D2 1346 aa16.28■□□□□ 0.2
RCL1-206ENST00000442869 LAMB2P55268 1798 aa16.28■□□□□ 0.2
RCL1-206ENST00000442869 SCN4AP35499 1836 aa16.27■□□□□ 0.2
RCL1-206ENST00000442869 FZD9O00144 591 aa16.27■□□□□ 0.2
RCL1-206ENST00000442869 PPEF1O14829 653 aaPredicted RBP16.27■□□□□ 0.2
RCL1-206ENST00000442869 PLBD2Q8NHP8 589 aa16.27■□□□□ 0.2
RCL1-206ENST00000442869 TAF1P21675 1872 aa16.27■□□□□ 0.19
RCL1-206ENST00000442869 ELL2O00472 640 aaPredicted RBP16.27■□□□□ 0.19
RCL1-206ENST00000442869 KLRG1Q96E93 195 aa16.27■□□□□ 0.19
RCL1-206ENST00000442869 L3MBTL3Q96JM7 780 aaPredicted RBP16.27■□□□□ 0.19
RCL1-206ENST00000442869 IFT57Q9NWB7 429 aa16.27■□□□□ 0.19
RCL1-206ENST00000442869 GNAI1P63096 354 aa16.26■□□□□ 0.19
RCL1-206ENST00000442869 JDP2Q8WYK2 163 aa16.26■□□□□ 0.19
RCL1-206ENST00000442869 HYPKQ9NX55 129 aa16.26■□□□□ 0.19
RCL1-206ENST00000442869 RNF123Q5XPI4 1314 aa16.26■□□□□ 0.19
RCL1-206ENST00000442869 IQCA1LA6NCM1 817 aa16.25■□□□□ 0.19
RCL1-206ENST00000442869 ATP5J2-PTCD1G3V325 749 aa16.25■□□□□ 0.19
RCL1-206ENST00000442869 CALD1Q05682 793 aaKnown RBP16.25■□□□□ 0.19
RCL1-206ENST00000442869 GRIPAP1Q4V328 841 aa16.25■□□□□ 0.19
RCL1-206ENST00000442869 TAF1DQ9H5J8 278 aaPredicted RBP16.25■□□□□ 0.19
RCL1-206ENST00000442869 ATP6V0A2Q9Y487 856 aa16.25■□□□□ 0.19
RCL1-206ENST00000442869 ABCC4O15439 1325 aa16.25■□□□□ 0.19
RCL1-206ENST00000442869 SH3TC1Q8TE82 1336 aa16.25■□□□□ 0.19
RCL1-206ENST00000442869 CHADLQ6NUI6 762 aa16.24■□□□□ 0.19
RCL1-206ENST00000442869 C8orf58Q8NAV2 365 aa16.24■□□□□ 0.19
RCL1-206ENST00000442869 ISCA1Q9BUE6 129 aa16.24■□□□□ 0.19
RCL1-206ENST00000442869 COL4A5P29400 1685 aa16.24■□□□□ 0.19
RCL1-206ENST00000442869 BBOX1O75936 387 aa16.23■□□□□ 0.19
RCL1-206ENST00000442869 FAM89AQ96GI7 184 aa16.23■□□□□ 0.19
RCL1-206ENST00000442869 PHAXQ9H814 394 aaKnown RBP16.23■□□□□ 0.19
RCL1-206ENST00000442869 GPC2Q8N158 579 aa16.23■□□□□ 0.19
RCL1-206ENST00000442869 LARGE2Q8N3Y3 721 aa16.23■□□□□ 0.19
RCL1-206ENST00000442869 DDX46Q7L014 1031 aaKnown RBP16.22■□□□□ 0.19
RCL1-206ENST00000442869 TMX4Q9H1E5 349 aaPredicted RBP16.22■□□□□ 0.19
RCL1-206ENST00000442869 HACL1Q9UJ83 578 aa16.22■□□□□ 0.19
RCL1-206ENST00000442869 DDX60Q8IY21 1712 aaKnown RBP16.21■□□□□ 0.19
RCL1-206ENST00000442869 EIF6P56537 245 aaKnown RBP16.21■□□□□ 0.19
RCL1-206ENST00000442869 EAPPQ56P03 285 aaPredicted RBP16.21■□□□□ 0.19
RCL1-206ENST00000442869 RTL5Q5HYW3 569 aaPredicted RBP16.21■□□□□ 0.19
RCL1-206ENST00000442869 LDHDQ86WU2 507 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms