RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 TFIP11Q9UBB9 837 aaKnown RBP16.83■□□□□ 0.28
MCF2L-218ENST00000442625 NWD1Q149M9 1564 aa16.82■□□□□ 0.28
MCF2L-218ENST00000442625 LRRC37A3O60309 1634 aa16.82■□□□□ 0.28
MCF2L-218ENST00000442625 DMTNQ08495 405 aa16.82■□□□□ 0.28
MCF2L-218ENST00000442625 TTC6Q86TZ1 520 aa16.82■□□□□ 0.28
MCF2L-218ENST00000442625 CDC37L1Q7L3B6 337 aa16.82■□□□□ 0.28
MCF2L-218ENST00000442625 RBM33Q96EV2 1170 aaKnown RBP16.82■□□□□ 0.28
MCF2L-218ENST00000442625 PXDNLA1KZ92 1463 aa16.81■□□□□ 0.28
MCF2L-218ENST00000442625 NBPF6Q5VWK0 638 aa16.81■□□□□ 0.28
MCF2L-218ENST00000442625 PDCL2Q8N4E4 241 aa16.81■□□□□ 0.28
MCF2L-218ENST00000442625 NBPF4Q96M43 638 aa16.81■□□□□ 0.28
MCF2L-218ENST00000442625 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-218ENST00000442625 LETM1O95202 739 aaPredicted RBP16.81■□□□□ 0.28
MCF2L-218ENST00000442625 TAF6LQ9Y6J9 622 aa16.81■□□□□ 0.28
MCF2L-218ENST00000442625 DIP2AQ14689 1571 aa16.8■□□□□ 0.28
MCF2L-218ENST00000442625 MPRIPQ6WCQ1 1025 aa16.8■□□□□ 0.28
MCF2L-218ENST00000442625 TICAM2Q86XR7 235 aa16.8■□□□□ 0.28
MCF2L-218ENST00000442625 C16orf45Q96MC5 204 aaPredicted RBP16.8■□□□□ 0.28
MCF2L-218ENST00000442625 TPCN1Q9ULQ1 816 aa16.8■□□□□ 0.28
MCF2L-218ENST00000442625 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.8■□□□□ 0.28
MCF2L-218ENST00000442625 CCDC186Q7Z3E2 898 aa16.79■□□□□ 0.28
MCF2L-218ENST00000442625 GLRX3O76003 335 aaKnown RBP16.79■□□□□ 0.28
MCF2L-218ENST00000442625 KCNA6P17658 529 aa16.79■□□□□ 0.28
MCF2L-218ENST00000442625 STK3Q13188 491 aa16.79■□□□□ 0.28
MCF2L-218ENST00000442625 PROSER3Q2NL68 480 aa16.79■□□□□ 0.28
MCF2L-218ENST00000442625 CWF19L2Q2TBE0 894 aaKnown RBP16.79■□□□□ 0.28
MCF2L-218ENST00000442625 DRC7Q8IY82 874 aa16.79■□□□□ 0.28
MCF2L-218ENST00000442625 LRRC59Q96AG4 307 aaKnown RBP16.79■□□□□ 0.28
MCF2L-218ENST00000442625 FAM227BQ96M60 508 aa16.79■□□□□ 0.28
MCF2L-218ENST00000442625 MRVI1Q9Y6F6 885 aa16.79■□□□□ 0.28
MCF2L-218ENST00000442625 ADCY9O60503 1353 aa16.79■□□□□ 0.28
MCF2L-218ENST00000442625 CCDC192P0DO97 292 aa16.78■□□□□ 0.28
MCF2L-218ENST00000442625 LARP1BQ659C4 914 aaKnown RBP16.78■□□□□ 0.28
MCF2L-218ENST00000442625 CLASRPQ8N2M8 674 aaKnown RBP16.78■□□□□ 0.28
MCF2L-218ENST00000442625 PRAMEF22A3QJZ6 481 aa16.78■□□□□ 0.28
MCF2L-218ENST00000442625 BTBD11A6QL63 1104 aa16.78■□□□□ 0.28
MCF2L-218ENST00000442625 EPB41L2O43491 1005 aaKnown RBP16.78■□□□□ 0.28
MCF2L-218ENST00000442625 BABAM1Q9NWV8 329 aa16.78■□□□□ 0.28
MCF2L-218ENST00000442625 C9orf78Q9NZ63 289 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-218ENST00000442625 ATP6V1DQ9Y5K8 247 aa16.78■□□□□ 0.28
MCF2L-218ENST00000442625 TYRO3Q06418 890 aa16.77■□□□□ 0.28
MCF2L-218ENST00000442625 DACT1Q9NYF0 836 aa16.77■□□□□ 0.28
MCF2L-218ENST00000442625 MAP3K2Q9Y2U5 619 aa16.77■□□□□ 0.28
MCF2L-218ENST00000442625 KCNJ4P48050 445 aa16.77■□□□□ 0.28
MCF2L-218ENST00000442625 ANO6Q4KMQ2 910 aa16.77■□□□□ 0.28
MCF2L-218ENST00000442625 TBX22Q9Y458 520 aa16.77■□□□□ 0.28
MCF2L-218ENST00000442625 CYP46A1Q9Y6A2 500 aa16.77■□□□□ 0.28
MCF2L-218ENST00000442625 IFIT2P09913 472 aaKnown RBP16.76■□□□□ 0.27
MCF2L-218ENST00000442625 TEFQ10587 303 aa16.76■□□□□ 0.27
MCF2L-218ENST00000442625 CHAF1AQ13111 956 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-218ENST00000442625 AACSQ86V21 672 aa16.76■□□□□ 0.27
MCF2L-218ENST00000442625 ECHDC1Q9NTX5 307 aa16.76■□□□□ 0.27
MCF2L-218ENST00000442625 CEMIPQ8WUJ3 1361 aa16.76■□□□□ 0.27
MCF2L-218ENST00000442625 A0A087WWV3 80 aa16.76■□□□□ 0.27
MCF2L-218ENST00000442625 NUP62CLQ9H1M0 184 aa16.76■□□□□ 0.27
MCF2L-218ENST00000442625 CBX8Q9HC52 389 aa16.76■□□□□ 0.27
MCF2L-218ENST00000442625 MAP3K11Q16584 847 aa16.76■□□□□ 0.27
MCF2L-218ENST00000442625 HSP90AB4PQ58FF6 505 aa16.76■□□□□ 0.27
MCF2L-218ENST00000442625 ZNF530Q6P9A1 599 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-218ENST00000442625 TTC41PQ6P2S7 1318 aa16.75■□□□□ 0.27
MCF2L-218ENST00000442625 VPS53Q5VIR6 699 aa16.75■□□□□ 0.27
MCF2L-218ENST00000442625 FAM200AQ8TCP9 573 aa16.75■□□□□ 0.27
MCF2L-218ENST00000442625 RUFY2Q8WXA3 655 aa16.75■□□□□ 0.27
MCF2L-218ENST00000442625 DDX11Q96FC9 970 aa16.75■□□□□ 0.27
MCF2L-218ENST00000442625 CCDC8Q9H0W5 538 aaPredicted RBP16.75■□□□□ 0.27
MCF2L-218ENST00000442625 ZSWIM6Q9HCJ5 1215 aa16.75■□□□□ 0.27
MCF2L-218ENST00000442625 RBM8AQ9Y5S9 174 aaKnown RBP16.75■□□□□ 0.27
MCF2L-218ENST00000442625 TRIM5Q9C035 493 aa16.74■□□□□ 0.27
MCF2L-218ENST00000442625 SIL1Q9H173 461 aa16.74■□□□□ 0.27
MCF2L-218ENST00000442625 ARID5BQ14865 1188 aa16.74■□□□□ 0.27
MCF2L-218ENST00000442625 LARP1Q6PKG0 1096 aaKnown RBP16.74■□□□□ 0.27
MCF2L-218ENST00000442625 ZNF592Q92610 1267 aa16.74■□□□□ 0.27
MCF2L-218ENST00000442625 TNMDQ9H2S6 317 aa16.74■□□□□ 0.27
MCF2L-218ENST00000442625 TMEM51Q9NW97 253 aa16.74■□□□□ 0.27
MCF2L-218ENST00000442625 TLR7Q9NYK1 1049 aaKnown RBP16.74■□□□□ 0.27
MCF2L-218ENST00000442625 SETD1BQ9UPS6 1966 aaKnown RBP16.73■□□□□ 0.27
MCF2L-218ENST00000442625 FOSBP53539 338 aa16.73■□□□□ 0.27
MCF2L-218ENST00000442625 CEBPZQ03701 1054 aaKnown RBP16.73■□□□□ 0.27
MCF2L-218ENST00000442625 NCBP1Q09161 790 aaKnown RBP16.73■□□□□ 0.27
MCF2L-218ENST00000442625 AIMP1Q12904 312 aaKnown RBP16.73■□□□□ 0.27
MCF2L-218ENST00000442625 CREB3L3Q68CJ9 461 aa16.73■□□□□ 0.27
MCF2L-218ENST00000442625 RGS22Q8NE09 1264 aa16.73■□□□□ 0.27
MCF2L-218ENST00000442625 DNAJC25Q9H1X3 360 aa16.73■□□□□ 0.27
MCF2L-218ENST00000442625 USP42Q9H9J4 1324 aaKnown RBP16.73■□□□□ 0.27
MCF2L-218ENST00000442625 PPFIA3O75145 1194 aa16.73■□□□□ 0.27
MCF2L-218ENST00000442625 NR1I2O75469 434 aa16.73■□□□□ 0.27
MCF2L-218ENST00000442625 KRT85P78386 507 aa16.73■□□□□ 0.27
MCF2L-218ENST00000442625 NMIQ13287 307 aaPredicted RBP16.73■□□□□ 0.27
MCF2L-218ENST00000442625 ANKRD7Q92527 254 aa16.73■□□□□ 0.27
MCF2L-218ENST00000442625 NECTIN1Q15223 517 aa16.72■□□□□ 0.27
MCF2L-218ENST00000442625 KLHDC4Q8TBB5 520 aa16.72■□□□□ 0.27
MCF2L-218ENST00000442625 CCDC171Q6TFL3 1326 aa16.72■□□□□ 0.27
MCF2L-218ENST00000442625 GOLGA6L6A8MZA4 724 aa16.72■□□□□ 0.27
MCF2L-218ENST00000442625 CCDC144BQ3MJ40 725 aa16.72■□□□□ 0.27
MCF2L-218ENST00000442625 CCDC144CPQ8IYA2 1237 aa16.72■□□□□ 0.27
MCF2L-218ENST00000442625 IP6K1Q92551 441 aa16.72■□□□□ 0.27
MCF2L-218ENST00000442625 DNAJC5Q9H3Z4 198 aa16.72■□□□□ 0.27
MCF2L-218ENST00000442625 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.72■□□□□ 0.27
MCF2L-218ENST00000442625 V9GYY5 206 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-218ENST00000442625 GOLGA6L4A6NEF3 574 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms